TCONS_00038608 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038608
Unique NameTCONS_00038608
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1804

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038608 ID=TCONS_00038608|Name=TCONS_00038608|organism=Clytia hemisphaerica|type=transcript|length=1804bp
GGCTCCGACAGGGGAGACTTCAATTGAATGGGCTTATTCTTCTTCTTCAC
ATTCTTAGTTCCCGTTGGTGCAACAACAGTAGAAGAAACATTACAAAACA
TCATTCCCATACAACGTGATAACTGGCAACTCACTTTCAAAACATGGCGC
AACGAATCTGCTAACACCGCAAATATTCTTCGTCTAACAGCCGCCCCTGT
TAGCCAATTACCCGCGGAAGGCAATTCTGCCCTGCTTATTCATATGCGCC
CtgataaattgaaaattaaaaccacAACCAGCAGTGACCCGGAATTTATG
ACCACTATTAATATTGATTTTCCATTAAATCAAGAAGTCGAAGTCAAGAT
TGTTAACTATGCTTGTCAAAACTGTCCTGTCagactcaaaatatttttcg
atgGCGTTGAGAAGTTTTCGAATCTCACAACGTCAAGTGTTTGGTACAAT
GTCAGCTGTTTTGTACCCTGGGTTATATCTGACAATCGCCATGAAGCAAC
CGACATAAAATATATCTCAAACGTACCTCTATTTGGAACAGAGCAATCTT
TTGATGAAGGTACAACCATTGCCACAATCCCATCTTGGCCTGCTGGAAAT
TCAGATTTTCACGTCtcattcaaattgaaaattaacGCCTGGTCAGATAG
ATGGAAACCTATTTTGACTTTCGATGTCGATGGAGCCTCCTTTCGATTGG
CGTACTTCTATTTCAACAATCATAAAATAGTGGTCGCACACAAAGTTGAT
AGTGGAGACTTTGATCGCATTGGTACAGTGTCCGCCTCGATGATAACCCT
TGGTCATTACCACAAGTGTAGCCTACGACAGGAGAAGGATGGAAACGATA
TATATAAAGTCAAATTCTTTTTCGACGATGAGTGGATAGGCCAGGAGATA
AATTACCTTCCTGATCTCACATTTTCCAATGTCAAAATAAAAGTTTACAG
CAAAGATGACTTTGATGTGTCTTTCAAGGAATTCGACTATAGTGGAAGTG
ACTGAATTTAATGGTGACATTTTcacttccaaacctaggcttagCTCAAA
GCCAGGTAAGGATAGGTAAATTGAGGTCCATATCGCTCTGAAAAAAGctt
gcaaaaaaaacaacaacattgaAGTTGTTATAACAAATCGCCATAACAGA
ACAGCGCGTTGCTACATCAGATGGattgttttatttgaaaaaagctaaaa
ttatcagtagaaaattcgtcggtaaaaAACGACGAAAAAAATGGCTGGTG
ACGGAATCTTTACCAATGAATTTTTATAGCCGATTAATTTTTTGCTATCG
GACATAAAAGCTATTCAGGGGTAATGCTGAGAAATTGGCAAAGACCATAC
ATGCAACGAATAAATTAAATGTTTCccaaatattaaattttatcTAGATT
TCATGAGAATCTTTTctgaattaaaaatttcaaaacgcAATCTATTCGAT
ATACAGTTTCACATTTGTTCCTGTCTAGATAAAAACAATCTTAGAATTGC
CGAAAAATGGTGAAATGGAGCAAGCCTGCCTCTCatgaataataaataaa
tatagataaaataaattttaacccatggattttaaaatttctttttgaat
ttagaattaaaagaaaattcccATTTTTAACCCCGTCTTTTCGTAAATTG
TAGCCTAGTAACCATAGATAATAATGGAATTATGTAACACTatatattgt
taactgaaaaaTATGTCCCCTATGTACTCTTTACaccatttttacttttt
gggcCCTTTCTACACCGGATCTTATTTGTGTTATTTTTAGGTCTAAAACG
GATT
Run BLAST on NCBI

protein sequence of TCONS_00038608-protein

>TCONS_00038608-protein ID=TCONS_00038608-protein|Name=TCONS_00038608-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
MGLFFFFTFLVPVGATTVEETLQNIIPIQRDNWQLTFKTWRNESANTANI
LRLTAAPVSQLPAEGNSALLIHMRPDKLKIKTTTSSDPEFMTTINIDFPL
NQEVEVKIVNYACQNCPVRLKIFFDGVEKFSNLTTSSVWYNVSCFVPWVI
SDNRHEATDIKYISNVPLFGTEQSFDEGTTIATIPSWPAGNSDFHVSFKL
KINAWSDRWKPILTFDVDGASFRLAYFYFNNHKIVVAHKVDSGDFDRIGT
VSASMITLGHYHKCSLRQEKDGNDIYKVKFFFDDEWIGQEINYLPDLTFS
NVKIKVYSKDDFDVSFKEFDYSGSD
Run BLAST on NCBI

transcript from alignment at sc0001892:2005..7852+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038608 ID=TCONS_00038608|Name=TCONS_00038608|organism=Clytia hemisphaerica|type=transcript|length=5848bp|location=Sequence derived from alignment at sc0001892:2005..7852+ (Clytia hemisphaerica)
GGCTCCGACAGGGGAGACTTCAATTGAATGGGCTTATTCTTCTTCTTCAC ATTCTTAGTTCCCGTTGGTGCAACAACAGTAGAAGAAACATTACAAAACA TCATTCCCATACAACGTGATAACTGGCAACTCACTTTCAAAACATGGCGC AACGAATCTGCTAACACCGCAAATATTCTTCGTCTAACAGCCGCCCCTGT TAGCCAATTACCCGCGGAAGGCAATTCTGCCCTGCTTGTAAGTTGAAACA TACCATTTAACAAATCTCATTGTCGTTTGCTTACCACGTTATTTAACCAA AAGACAACCTTTCAGCGCCTCAAACACCACAAGAGCGCAATTTAGACAAA TTATCTTGTTGATTCTGCTAATTGCCAGTATGGGAGGCATATCTAATTTA CATATCACCACTATTTTCATTCACTTCATTATCACAGTGTCAGTATGTAG GGAGGGGTAACTTCCTTTGTGGGAAAAAATGTTTACTCTGCTTAGTGTgc ccatgaacatataaacgactggacatccatctcctttgttttTTTGTCGA AAGGGCTGCTAGCTTCGTTGCCGCCTCGTTTAAAACATAAAATGAAACAA TAAATTTTGATGATATACCACTTGGAAATACCTTGCTAACAACGTCAAAA CTTCGGCAAAAGTCTCTGTTGTTCTGCTCTTCTCAAGTCTTTTATCTATA TCATAACAAAGATAACAGAGGCAAAATCATCGTCATCTTGTCAAAACTCC GACTAATATTTCTAAATTTTGACTTAAAAGTGTCGAATAATTTTAGAGAG TGTCACACTCTAATTTTGATATTCTTATAACACACGCTCTCAAGTTTGGC AAGCTATTTTTTTTCAAGTCATGAAAAAAATTATTGGAGTGACAAAAGGG ATTAAAAAGTATACACGCAGTTAAAATTCTGCATTTCAGAGTTGAAGAAT GTTGATAAAATATATTGCAAACTTATGAAAAAATTCGAAAATAATTCTTT TGTGGATTAGGAGTGATGTTCAAGCTCTGTCAATCCTTTTATCTAAATAA TTCAAAGAAATAAAATTTTGGCGGAATATTGTCGGATTTTTCATACCAAT TTTAAAATAAAGATAGATGTCCAGTCGTTTATATGTTCATGGTATGCTCT AATATGTGTCGGCACAAGGGACTTTCCAGTTCCAGTAAAACGTAAGCTAC GGCACGTCCTTTTTTTTGCTTGTTTAAGGGCTCTGACGGAAAATTAATTT TAGTATTTGAACGTAAAAGTTATTTTTGGCCCAGCGCTAGCGATAGGGCC TTTCATTTGCAACTTTCCGTCCGTCTGCTGTCTGTCCGTCCGTTTTGGTA GAAACGGCGCTTAAAACCAGTAACACACTTTTTAATTTTGCCGTCTGGAG AGGGAAAAGCTTGCTAGAGTCGGATACTGGCTATATAAGATATATTTTCT GATTCCGCGCTCCTTCAAtataattttcaaaacaaaacaagatggcggtc gaagcgaggaggttgattggctgggccttcacgcccaacgggcttcttgt ttagttgtttaaaaaagaattgcctttataaattgctttttaatcaaatc ccttaagagtaattaaaaatttaatcatgcgaaaatgacgttatgaactt taaaaagacgttaataatatgtcacattaccttcttttataaaaaatgct aagttttaatgggtaatcaatctttttgtttcgaagttcgaagttttttg aaactgtccgcaaagaattgaactgttttaaatttttcggaaaatttttt ctaaattaatgcatcaaaagttatgactgttgttctatgaaaaattggga tggaaaatggtcaaaaagcactattttcaagattttgaagcaaataagct tttagaaaaattttccgaaaaactGATTCGGTAATAGATACATCtaccgg aaaaaaaattgaagatgctcttaaattttcaaactcaCGGATAATTAGCC TAACAGAATACATTGTgagctacatcaagtagaaatttatattttgNtct taaattttcaaactcaCGGATAATTAGCCTAACAGAATACATTGTgagct acatcaagtagaaatttatattttgtacgtggcaaataataaaaatttac tatagtcagagcccttaagagtgtcttaaaaaattcaaaaacgttGTAGA ACATTCCCGAACGTTCTTATCGCGAGTTGAATATTAACCTTCGGGGACAC AAAGGATTATTTGCGAGCGTTAAGGAACGTCTAAAGACTGttccatttca tttgtatttcCAATCGTTTGAGatgacacatattttttttgctaGCTGTT TTTCAATCTAATAATGTAATCCAATTAGAGGCTGGAATtgatatgttttt aaaatattgtttgTTGTTTATTACATAGATTCATATGCGCCCtgataaat tgaaaattaaaaccacAACCAGCAGTGACCCGGAATTTATGACCACTATT AATATTGATTTTCCATTAAATCAAGAAGTCGAAGTCAAGATTGTTAACTA TGCTTGTCAAAACTGTCCTGTCagactcaaaatatttttcgatgGCGTTG AGAAGTTTTCGAATCTCACAACGTCAAGTGTTTGGTACAATGTCAGCTGT TTTGTACCCTGGGTTATATCTGACAATCGCCATGAAGCAACCGACATAAA ATATATCTCAAACGTACCTCTATTTGGTGAGCCTTTTATGATACatgttt tgtttataagaacatccaaaatctttgaagccttcggatattcttaactt caGTTTGTTTATATCACTCACACTCATGTATCAGAGTAGCGGTACCCATT TCCCCTCACAATGTATGTGGGAATCGAACTCGGACCTCCCAGACGGGGGT CATAAGAACGATGACCACCACACCACTACGCCAAAAAGCGTCTATAGAAG TTAAAATAGAATTCATAGCAGAGAGTTATAGGAGTTAAAAGATATAATTT AGGAGTACAAACctttgcgagcagaaactttcacgattcTCGCGAATTct agcccttttcgcgaaagtaaaatgtctttgaaaattcttgaaaggggccg tccacatcgTACATACGCACTAAAATCGAAAATCaagtacccctcccccc cttgttggcaaatggctataccccctctggtaagtacgtactttttcatt cacccccccTCCcatcggttgaagaaaatttcaaattcaaatcgtTTTGT TCGGACCTTTACTTCAatgtttatcaagaaactttttcttttccttgatg cgtataacaaGCGTAATAAAGTCGACAAAAAGCAAGcgaaaaagggctat gaaaattttttttctgcgtacgtacatttttctTTGACCCTTCCCCTCCC CTGtgcgcaagcatacgcttttgagaaggccccccccccccccccggggc caaGCCACCTTTTTtggaaaccccccccccctttagtgcgtacgtactat gtggacggcccgaAAGAGCAAATcttgaaagtttatgctcgcgaaaaaaa tctgaaaagaaaatttactcaaattttcttctttgacGATAACAAGGATA AAATTTAGTGTAGAAATTatgcaaaagttttattgtgGTTTGAGTACATT TGAacgtagacgatcctatcgtctacttattatcactaaaaaagggaata attcAGGAGGTGGGATAAATTTGAAGACGGAGTTTAGTTCGGGGCAAGTA aacagtggcggaggtgtttacagtcAGTCAAGGAAATAGGTTGTTGCGCT CTGAGCATTTTAgcgaaatgtttgaaaagggcGTGAGAACGACATGTTAT GTATAGGCAAGTAAGCTTGACTGtttataaaaaagcgttgttAATAACAC ATAAATACGAGAAATGCTCAATTATAAAACTTGAGTTTTTATTTCATATT CGACAGGAACAGAGCAATCTTTTGATGAAGGTACAACCATTGCCACAATC CCATCTTGGCCTGCTGGAAATTCAGATTTTCACGTCtcattcaaattgaa aattaacGCCTGGTCAGATAGATGGAAACCTATTTTGACTTTCGATGTCG ATGGAGCCTCCTTTCGATTGGCGTACTTCTATTTCAACAATCATAAAGTa atgaaacttgaaattttgggcATCTATGTCTCCCCTTTACATTTCTCCTC CTTACTCCCCCTTCTACACACCTCCCCTTCTACTTTCTCCTCCTTACTCC CCCTTCTACACACCTCCCCCTTCTACACACCTCCCCTTCTACACACCTCC CCTTCTACTTTCTCCTCCTTACTCCCCCTTCTACACACCTCCCCCTTCTA CACACCCCCCCTTCTACACACCTCCCCTTCTACTTTCTCCTCTCTACACC TATCTATACCCTTAATCTATGAATTCCTTCTACGTGTTTCAACATACCTT CAAACCGACCCCTCTCTCCTTATCTTTCCCTCTATAACTCCCTTTAAATC TCTCTCTCTAcattttctaaatactttcccCTCTCTATATATATACGCCT TCCCCTATATCTCTCCCCATATAGCTCCAAAATGACCCCTCTCACTAACT CTCCCCTACCTCTCTCTTCACATGCCCCCGACCTAACCATCCCTCTCCCT CCACACCTCTCTCTGAATCAACCCCTCCATCATCTCcccatacacgtttt tcttttggGAAACTaattttaccaagcagcctcaatgtttcttaagaaat ttttaCTAACTTCTTTTCAGATAGTGGTCGCACACAAAGTTGATAGTGGA GACTTTGATCGCATTGGTACAGTGTCCGCCTCGATGATAACCCTTGGTCA TTACCACAAGTGTAGCCTACGACAGGAGAAGGATGGAAACGATATATATA AAGTCAAATTCTTTTTCGACGATGAGTGGATAGGCCAGGAGATAAATTAC CTTCCTGATCTCACATTTTCCAATGTCAAAATAAAAGTTTACAGCAAAGA TGACTTTGATGTGTCTTTCAAGGAATTCGACTATAGTGGAAGTGACTGAA TTTAATGGTGACATTTTcacttccaaacctaggcttagCTCAAAGCCAGG TAAGGATAGGTAAATTGAGGTCCATATCGCTCTGAAAAAAGcttgcaaaa aaaacaacaacattgaAGTTGTTATAACAAATCGCCATAACAGAACAGCG CGTTGCTACATCAGATGGattgttttatttgaaaaaagctaaaattatca gtagaaaattcgtcggtaaaaAACGACGAAAAAAATGGCTGGTGACGGAA TCTTTACCAATGAATTTTTATAGCCGATTAATTTTTTGCTATCGGACATA AAAGCTATTCAGGGGTAATGCTGAGAAATTGGCAAAGACCATACATGCAA CGAATAAATTAAATGTTTCccaaatattaaattttatcTAGATTTCATGA GAATCTTTTctgaattaaaaatttcaaaacgcAATCTATTCGATATACAG TTTCACATTTGTTCCTGTCTAGATAAAAACAATCTTAGAATTGCCGAAAA ATGGTGAAATGGAGCAAGCCTGCCTCTCatgaataataaataaatataga taaaataaattttaacccatggattttaaaatttctttttgaatttagaa ttaaaagaaaattcccATTTTTAACCCCGTCTTTTCGTAAATTGTAGCCT AGTAACCATAGATAATAATGGAATTATGTAACACTatatattgttaactg aaaaaTATGTCCCCTATGTACTCTTTACaccatttttactttttgggcCC TTTCTACACCGGATCTTATTTGTGTTATTTTTAGGTCTAAAACGGATT

Coding sequence (CDS) from alignment at sc0001892:2005..7852+

>TCONS_00038608 ID=TCONS_00038608|Name=TCONS_00038608|organism=Clytia hemisphaerica|type=CDS|length=3912bp|location=Sequence derived from alignment at sc0001892:2005..7852+ (Clytia hemisphaerica)
ATGGGCTTATTCTTCTTCTTCACATTCTTAGTTCCCGTTGGTGCAACAAC
AGTAGAAGAAACATTACAAAACATCATTCCCATACAACGTGATAACTGGC
AACTCACTTTCAAAACATGGCGCAACGAATCTGCTAACACCGCAAATATT
CTTCGTCTAACAGCCGCCCCTGTTAGCCAATTACCCGCGGAAGGCAATTC
TGCCCTGCTTATTCATATGCGCCCtgataaattgaaaattaaaaccacAA
CCAGCAGTGACCCGGAATTTATGACCACTATTAATATTGATTTTCCATTA
AATCAAGAAGTCGAAGTCAAGATTGTTAACTATGCTTGTCAAAACTGTCC
TGTCagactcaaaatatttttcgatgGCGTTGAGAAGTTTTCGAATCTCA
CAACGTCAAGTGTTTGGTACAATGTCAGCTGTTTTGTACCCTGGGTTATA
TCTGACAATCGCCATGAAGCAACCGACATAAAATATATCTCAAACGTACC
TCTATTTGGAACAGAGCAATCTTTTGATGAAGGTACAACCATTGCCACAA
TCCCATCTTGGCCTGCTGGAAATTCAGATTTTCACGTCtcattcaaattg
aaaattaacGCCTGGTCAGATAGATGGAAACCTATTTTGACTTTCGATGT
CGATGGAGCCTCCTTTCGATTGGCGTACTTCTATTTCAACAATCATAAAA
TAGTGGTCGCACACAAAGTTGATAGTGGAGACTTTGATCGCATTGGTACA
GTGTCCGCCTCGATGATAACCCTTGGTCATTACCACAAGTGTAGCCTACG
ACAGGAGAAGGATGGAAACGATATATATAAAGTCAAATTCTTTTTCGACG
ATGAGTGGATAGGCCAGGAGATAAATTACCTTCCTGATCTCACATTTTCC
AATGTCAAAATAAAAGTTTACAGCAAAGATGACTTTGATGTGTCTTTCAA
GGAATTCGACTATAGTGGAAGTGACTGAATGGGCTTATTCTTCTTCTTCA
CATTCTTAGTTCCCGTTGGTGCAACAACAGTAGAAGAAACATTACAAAAC
ATCATTCCCATACAACGTGATAACTGGCAACTCACTTTCAAAACATGGCG
CAACGAATCTGCTAACACCGCAAATATTCTTCGTCTAACAGCCGCCCCTG
TTAGCCAATTACCCGCGGAAGGCAATTCTGCCCTGCTTATTCATATGCGC
CCtgataaattgaaaattaaaaccacAACCAGCAGTGACCCGGAATTTAT
GACCACTATTAATATTGATTTTCCATTAAATCAAGAAGTCGAAGTCAAGA
TTGTTAACTATGCTTGTCAAAACTGTCCTGTCagactcaaaatatttttc
gatgGCGTTGAGAAGTTTTCGAATCTCACAACGTCAAGTGTTTGGTACAA
TGTCAGCTGTTTTGTACCCTGGGTTATATCTGACAATCGCCATGAAGCAA
CCGACATAAAATATATCTCAAACGTACCTCTATTTGGAACAGAGCAATCT
TTTGATGAAGGTACAACCATTGCCACAATCCCATCTTGGCCTGCTGGAAA
TTCAGATTTTCACGTCtcattcaaattgaaaattaacGCCTGGTCAGATA
GATGGAAACCTATTTTGACTTTCGATGTCGATGGAGCCTCCTTTCGATTG
GCGTACTTCTATTTCAACAATCATAAAATAGTGGTCGCACACAAAGTTGA
TAGTGGAGACTTTGATCGCATTGGTACAGTGTCCGCCTCGATGATAACCC
TTGGTCATTACCACAAGTGTAGCCTACGACAGGAGAAGGATGGAAACGAT
ATATATAAAGTCAAATTCTTTTTCGACGATGAGTGGATAGGCCAGGAGAT
AAATTACCTTCCTGATCTCACATTTTCCAATGTCAAAATAAAAGTTTACA
GCAAAGATGACTTTGATGTGTCTTTCAAGGAATTCGACTATAGTGGAAGT
GACTGAATGGGCTTATTCTTCTTCTTCACATTCTTAGTTCCCGTTGGTGC
AACAACAGTAGAAGAAACATTACAAAACATCATTCCCATACAACGTGATA
ACTGGCAACTCACTTTCAAAACATGGCGCAACGAATCTGCTAACACCGCA
AATATTCTTCGTCTAACAGCCGCCCCTGTTAGCCAATTACCCGCGGAAGG
CAATTCTGCCCTGCTTATTCATATGCGCCCtgataaattgaaaattaaaa
ccacAACCAGCAGTGACCCGGAATTTATGACCACTATTAATATTGATTTT
CCATTAAATCAAGAAGTCGAAGTCAAGATTGTTAACTATGCTTGTCAAAA
CTGTCCTGTCagactcaaaatatttttcgatgGCGTTGAGAAGTTTTCGA
ATCTCACAACGTCAAGTGTTTGGTACAATGTCAGCTGTTTTGTACCCTGG
GTTATATCTGACAATCGCCATGAAGCAACCGACATAAAATATATCTCAAA
CGTACCTCTATTTGGAACAGAGCAATCTTTTGATGAAGGTACAACCATTG
CCACAATCCCATCTTGGCCTGCTGGAAATTCAGATTTTCACGTCtcattc
aaattgaaaattaacGCCTGGTCAGATAGATGGAAACCTATTTTGACTTT
CGATGTCGATGGAGCCTCCTTTCGATTGGCGTACTTCTATTTCAACAATC
ATAAAATAGTGGTCGCACACAAAGTTGATAGTGGAGACTTTGATCGCATT
GGTACAGTGTCCGCCTCGATGATAACCCTTGGTCATTACCACAAGTGTAG
CCTACGACAGGAGAAGGATGGAAACGATATATATAAAGTCAAATTCTTTT
TCGACGATGAGTGGATAGGCCAGGAGATAAATTACCTTCCTGATCTCACA
TTTTCCAATGTCAAAATAAAAGTTTACAGCAAAGATGACTTTGATGTGTC
TTTCAAGGAATTCGACTATAGTGGAAGTGACTGAATGGGCTTATTCTTCT
TCTTCACATTCTTAGTTCCCGTTGGTGCAACAACAGTAGAAGAAACATTA
CAAAACATCATTCCCATACAACGTGATAACTGGCAACTCACTTTCAAAAC
ATGGCGCAACGAATCTGCTAACACCGCAAATATTCTTCGTCTAACAGCCG
CCCCTGTTAGCCAATTACCCGCGGAAGGCAATTCTGCCCTGCTTATTCAT
ATGCGCCCtgataaattgaaaattaaaaccacAACCAGCAGTGACCCGGA
ATTTATGACCACTATTAATATTGATTTTCCATTAAATCAAGAAGTCGAAG
TCAAGATTGTTAACTATGCTTGTCAAAACTGTCCTGTCagactcaaaata
tttttcgatgGCGTTGAGAAGTTTTCGAATCTCACAACGTCAAGTGTTTG
GTACAATGTCAGCTGTTTTGTACCCTGGGTTATATCTGACAATCGCCATG
AAGCAACCGACATAAAATATATCTCAAACGTACCTCTATTTGGAACAGAG
CAATCTTTTGATGAAGGTACAACCATTGCCACAATCCCATCTTGGCCTGC
TGGAAATTCAGATTTTCACGTCtcattcaaattgaaaattaacGCCTGGT
CAGATAGATGGAAACCTATTTTGACTTTCGATGTCGATGGAGCCTCCTTT
CGATTGGCGTACTTCTATTTCAACAATCATAAAATAGTGGTCGCACACAA
AGTTGATAGTGGAGACTTTGATCGCATTGGTACAGTGTCCGCCTCGATGA
TAACCCTTGGTCATTACCACAAGTGTAGCCTACGACAGGAGAAGGATGGA
AACGATATATATAAAGTCAAATTCTTTTTCGACGATGAGTGGATAGGCCA
GGAGATAAATTACCTTCCTGATCTCACATTTTCCAATGTCAAAATAAAAG
TTTACAGCAAAGATGACTTTGATGTGTCTTTCAAGGAATTCGACTATAGT
GGAAGTGACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023175XLOC_023175Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038608-exon-sc0001892-1491911889:2005..2241TCONS_00038608-exon-sc0001892-1491911889:2005..2241Clytia hemisphaericaexon
TCONS_00038608-exon-sc0001892-1510915933:2005..2241TCONS_00038608-exon-sc0001892-1510915933:2005..2241Clytia hemisphaericaexon
TCONS_00038608-exon-sc0001892-1575043694:2005..2241TCONS_00038608-exon-sc0001892-1575043694:2005..2241Clytia hemisphaericaexon
TCONS_00038608-exon-sc0001892-1491911889:4433..4730TCONS_00038608-exon-sc0001892-1491911889:4433..4730Clytia hemisphaericaexon
TCONS_00038608-exon-sc0001892-1510915933:4433..4730TCONS_00038608-exon-sc0001892-1510915933:4433..4730Clytia hemisphaericaexon
TCONS_00038608-exon-sc0001892-1575043694:4433..4730TCONS_00038608-exon-sc0001892-1575043694:4433..4730Clytia hemisphaericaexon
TCONS_00038608-exon-sc0001892-1491911889:5961..6151TCONS_00038608-exon-sc0001892-1491911889:5961..6151Clytia hemisphaericaexon
TCONS_00038608-exon-sc0001892-1510915933:5961..6151TCONS_00038608-exon-sc0001892-1510915933:5961..6151Clytia hemisphaericaexon
TCONS_00038608-exon-sc0001892-1575043694:5961..6151TCONS_00038608-exon-sc0001892-1575043694:5961..6151Clytia hemisphaericaexon
TCONS_00038608-exon-sc0001892-1491911889:6775..7852TCONS_00038608-exon-sc0001892-1491911889:6775..7852Clytia hemisphaericaexon
TCONS_00038608-exon-sc0001892-1510915933:6775..7852TCONS_00038608-exon-sc0001892-1510915933:6775..7852Clytia hemisphaericaexon
TCONS_00038608-exon-sc0001892-1575043694:6775..7852TCONS_00038608-exon-sc0001892-1575043694:6775..7852Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038608-proteinTCONS_00038608-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001892supercontigsc0001892:2005..7852 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.177945 0.151834 0.0503696 0.123197 1.07986 0.734802 0.486149 0.803165 0.24367 0.487562 0.225352 0.0592551 5.41431 4.54741 0.0505215 0.0542173 1.06866 1.54032 5.81665 9.30325 3.20438 3.20988 2.52485 3.33884 3.48669 5.30709 70.5153 55.8234 0.567826 0.503065
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038608 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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