XLOC_023175 (gene) - C. hemisphaerica

Overview
NameXLOC_023175
Unique NameXLOC_023175
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001892:2005..7852+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023175 ID=XLOC_023175|Name=XLOC_023175|organism=Clytia hemisphaerica|type=gene|length=5848bp|location=Sequence derived from alignment at sc0001892:2005..7852+ (Clytia hemisphaerica)
GGCTCCGACAGGGGAGACTTCAATTGAATGGGCTTATTCTTCTTCTTCAC ATTCTTAGTTCCCGTTGGTGCAACAACAGTAGAAGAAACATTACAAAACA TCATTCCCATACAACGTGATAACTGGCAACTCACTTTCAAAACATGGCGC AACGAATCTGCTAACACCGCAAATATTCTTCGTCTAACAGCCGCCCCTGT TAGCCAATTACCCGCGGAAGGCAATTCTGCCCTGCTTGTAAGTTGAAACA TACCATTTAACAAATCTCATTGTCGTTTGCTTACCACGTTATTTAACCAA AAGACAACCTTTCAGCGCCTCAAACACCACAAGAGCGCAATTTAGACAAA TTATCTTGTTGATTCTGCTAATTGCCAGTATGGGAGGCATATCTAATTTA CATATCACCACTATTTTCATTCACTTCATTATCACAGTGTCAGTATGTAG GGAGGGGTAACTTCCTTTGTGGGAAAAAATGTTTACTCTGCTTAGTGTgc ccatgaacatataaacgactggacatccatctcctttgttttTTTGTCGA AAGGGCTGCTAGCTTCGTTGCCGCCTCGTTTAAAACATAAAATGAAACAA TAAATTTTGATGATATACCACTTGGAAATACCTTGCTAACAACGTCAAAA CTTCGGCAAAAGTCTCTGTTGTTCTGCTCTTCTCAAGTCTTTTATCTATA TCATAACAAAGATAACAGAGGCAAAATCATCGTCATCTTGTCAAAACTCC GACTAATATTTCTAAATTTTGACTTAAAAGTGTCGAATAATTTTAGAGAG TGTCACACTCTAATTTTGATATTCTTATAACACACGCTCTCAAGTTTGGC AAGCTATTTTTTTTCAAGTCATGAAAAAAATTATTGGAGTGACAAAAGGG ATTAAAAAGTATACACGCAGTTAAAATTCTGCATTTCAGAGTTGAAGAAT GTTGATAAAATATATTGCAAACTTATGAAAAAATTCGAAAATAATTCTTT TGTGGATTAGGAGTGATGTTCAAGCTCTGTCAATCCTTTTATCTAAATAA TTCAAAGAAATAAAATTTTGGCGGAATATTGTCGGATTTTTCATACCAAT TTTAAAATAAAGATAGATGTCCAGTCGTTTATATGTTCATGGTATGCTCT AATATGTGTCGGCACAAGGGACTTTCCAGTTCCAGTAAAACGTAAGCTAC GGCACGTCCTTTTTTTTGCTTGTTTAAGGGCTCTGACGGAAAATTAATTT TAGTATTTGAACGTAAAAGTTATTTTTGGCCCAGCGCTAGCGATAGGGCC TTTCATTTGCAACTTTCCGTCCGTCTGCTGTCTGTCCGTCCGTTTTGGTA GAAACGGCGCTTAAAACCAGTAACACACTTTTTAATTTTGCCGTCTGGAG AGGGAAAAGCTTGCTAGAGTCGGATACTGGCTATATAAGATATATTTTCT GATTCCGCGCTCCTTCAAtataattttcaaaacaaaacaagatggcggtc gaagcgaggaggttgattggctgggccttcacgcccaacgggcttcttgt ttagttgtttaaaaaagaattgcctttataaattgctttttaatcaaatc ccttaagagtaattaaaaatttaatcatgcgaaaatgacgttatgaactt taaaaagacgttaataatatgtcacattaccttcttttataaaaaatgct aagttttaatgggtaatcaatctttttgtttcgaagttcgaagttttttg aaactgtccgcaaagaattgaactgttttaaatttttcggaaaatttttt ctaaattaatgcatcaaaagttatgactgttgttctatgaaaaattggga tggaaaatggtcaaaaagcactattttcaagattttgaagcaaataagct tttagaaaaattttccgaaaaactGATTCGGTAATAGATACATCtaccgg aaaaaaaattgaagatgctcttaaattttcaaactcaCGGATAATTAGCC TAACAGAATACATTGTgagctacatcaagtagaaatttatattttgNtct taaattttcaaactcaCGGATAATTAGCCTAACAGAATACATTGTgagct acatcaagtagaaatttatattttgtacgtggcaaataataaaaatttac tatagtcagagcccttaagagtgtcttaaaaaattcaaaaacgttGTAGA ACATTCCCGAACGTTCTTATCGCGAGTTGAATATTAACCTTCGGGGACAC AAAGGATTATTTGCGAGCGTTAAGGAACGTCTAAAGACTGttccatttca tttgtatttcCAATCGTTTGAGatgacacatattttttttgctaGCTGTT TTTCAATCTAATAATGTAATCCAATTAGAGGCTGGAATtgatatgttttt aaaatattgtttgTTGTTTATTACATAGATTCATATGCGCCCtgataaat tgaaaattaaaaccacAACCAGCAGTGACCCGGAATTTATGACCACTATT AATATTGATTTTCCATTAAATCAAGAAGTCGAAGTCAAGATTGTTAACTA TGCTTGTCAAAACTGTCCTGTCagactcaaaatatttttcgatgGCGTTG AGAAGTTTTCGAATCTCACAACGTCAAGTGTTTGGTACAATGTCAGCTGT TTTGTACCCTGGGTTATATCTGACAATCGCCATGAAGCAACCGACATAAA ATATATCTCAAACGTACCTCTATTTGGTGAGCCTTTTATGATACatgttt tgtttataagaacatccaaaatctttgaagccttcggatattcttaactt caGTTTGTTTATATCACTCACACTCATGTATCAGAGTAGCGGTACCCATT TCCCCTCACAATGTATGTGGGAATCGAACTCGGACCTCCCAGACGGGGGT CATAAGAACGATGACCACCACACCACTACGCCAAAAAGCGTCTATAGAAG TTAAAATAGAATTCATAGCAGAGAGTTATAGGAGTTAAAAGATATAATTT AGGAGTACAAACctttgcgagcagaaactttcacgattcTCGCGAATTct agcccttttcgcgaaagtaaaatgtctttgaaaattcttgaaaggggccg tccacatcgTACATACGCACTAAAATCGAAAATCaagtacccctcccccc cttgttggcaaatggctataccccctctggtaagtacgtactttttcatt cacccccccTCCcatcggttgaagaaaatttcaaattcaaatcgtTTTGT TCGGACCTTTACTTCAatgtttatcaagaaactttttcttttccttgatg cgtataacaaGCGTAATAAAGTCGACAAAAAGCAAGcgaaaaagggctat gaaaattttttttctgcgtacgtacatttttctTTGACCCTTCCCCTCCC CTGtgcgcaagcatacgcttttgagaaggccccccccccccccccggggc caaGCCACCTTTTTtggaaaccccccccccctttagtgcgtacgtactat gtggacggcccgaAAGAGCAAATcttgaaagtttatgctcgcgaaaaaaa tctgaaaagaaaatttactcaaattttcttctttgacGATAACAAGGATA AAATTTAGTGTAGAAATTatgcaaaagttttattgtgGTTTGAGTACATT TGAacgtagacgatcctatcgtctacttattatcactaaaaaagggaata attcAGGAGGTGGGATAAATTTGAAGACGGAGTTTAGTTCGGGGCAAGTA aacagtggcggaggtgtttacagtcAGTCAAGGAAATAGGTTGTTGCGCT CTGAGCATTTTAgcgaaatgtttgaaaagggcGTGAGAACGACATGTTAT GTATAGGCAAGTAAGCTTGACTGtttataaaaaagcgttgttAATAACAC ATAAATACGAGAAATGCTCAATTATAAAACTTGAGTTTTTATTTCATATT CGACAGGAACAGAGCAATCTTTTGATGAAGGTACAACCATTGCCACAATC CCATCTTGGCCTGCTGGAAATTCAGATTTTCACGTCtcattcaaattgaa aattaacGCCTGGTCAGATAGATGGAAACCTATTTTGACTTTCGATGTCG ATGGAGCCTCCTTTCGATTGGCGTACTTCTATTTCAACAATCATAAAGTa atgaaacttgaaattttgggcATCTATGTCTCCCCTTTACATTTCTCCTC CTTACTCCCCCTTCTACACACCTCCCCTTCTACTTTCTCCTCCTTACTCC CCCTTCTACACACCTCCCCCTTCTACACACCTCCCCTTCTACACACCTCC CCTTCTACTTTCTCCTCCTTACTCCCCCTTCTACACACCTCCCCCTTCTA CACACCCCCCCTTCTACACACCTCCCCTTCTACTTTCTCCTCTCTACACC TATCTATACCCTTAATCTATGAATTCCTTCTACGTGTTTCAACATACCTT CAAACCGACCCCTCTCTCCTTATCTTTCCCTCTATAACTCCCTTTAAATC TCTCTCTCTAcattttctaaatactttcccCTCTCTATATATATACGCCT TCCCCTATATCTCTCCCCATATAGCTCCAAAATGACCCCTCTCACTAACT CTCCCCTACCTCTCTCTTCACATGCCCCCGACCTAACCATCCCTCTCCCT CCACACCTCTCTCTGAATCAACCCCTCCATCATCTCcccatacacgtttt tcttttggGAAACTaattttaccaagcagcctcaatgtttcttaagaaat ttttaCTAACTTCTTTTCAGATAGTGGTCGCACACAAAGTTGATAGTGGA GACTTTGATCGCATTGGTACAGTGTCCGCCTCGATGATAACCCTTGGTCA TTACCACAAGTGTAGCCTACGACAGGAGAAGGATGGAAACGATATATATA AAGTCAAATTCTTTTTCGACGATGAGTGGATAGGCCAGGAGATAAATTAC CTTCCTGATCTCACATTTTCCAATGTCAAAATAAAAGTTTACAGCAAAGA TGACTTTGATGTGTCTTTCAAGGAATTCGACTATAGTGGAAGTGACTGAA TTTAATGGTGACATTTTcacttccaaacctaggcttagCTCAAAGCCAGG TAAGGATAGGTAAATTGAGGTCCATATCGCTCTGAAAAAAGcttgcaaaa aaaacaacaacattgaAGTTGTTATAACAAATCGCCATAACAGAACAGCG CGTTGCTACATCAGATGGattgttttatttgaaaaaagctaaaattatca gtagaaaattcgtcggtaaaaAACGACGAAAAAAATGGCTGGTGACGGAA TCTTTACCAATGAATTTTTATAGCCGATTAATTTTTTGCTATCGGACATA AAAGCTATTCAGGGGTAATGCTGAGAAATTGGCAAAGACCATACATGCAA CGAATAAATTAAATGTTTCccaaatattaaattttatcTAGATTTCATGA GAATCTTTTctgaattaaaaatttcaaaacgcAATCTATTCGATATACAG TTTCACATTTGTTCCTGTCTAGATAAAAACAATCTTAGAATTGCCGAAAA ATGGTGAAATGGAGCAAGCCTGCCTCTCatgaataataaataaatataga taaaataaattttaacccatggattttaaaatttctttttgaatttagaa ttaaaagaaaattcccATTTTTAACCCCGTCTTTTCGTAAATTGTAGCCT AGTAACCATAGATAATAATGGAATTATGTAACACTatatattgttaactg aaaaaTATGTCCCCTATGTACTCTTTACaccatttttactttttgggcCC TTTCTACACCGGATCTTATTTGTGTTATTTTTAGGTCTAAAACGGATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038608TCONS_00038608Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038608-proteinTCONS_00038608-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001892supercontigsc0001892:2005..7852 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18 0.15 0.05 0.12 1.08 0.73 0.49 0.8 0.24 0.49 0.23 0.06 5.41 4.55 0.05 0.05 1.07 1.54 5.82 9.3 3.2 3.21 2.52 3.34 3.49 5.31 70.52 55.82 0.57 0.5