TCONS_00038606 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038606
Unique NameTCONS_00038606
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length182

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038606 ID=TCONS_00038606|Name=TCONS_00038606|organism=Clytia hemisphaerica|type=transcript|length=182bp
TACCTGTGTAAACCTTGCACAGGAGACTATATAATAAAGCTATTTCTATA
ACTGTGTAAACCTTGCACAGCAGACTATATAATAAAACCAACAAGAAGAC
TAAAGCTACTTCTTTACCTGTGTAAACCTTGCACAGGAGACTATAAAATA
TGCAATTTGTAAAAACTATTGTTAAACTCCCC
Run BLAST on NCBI

transcript from alignment at sc0001891:40667..40848

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038606 ID=TCONS_00038606|Name=TCONS_00038606|organism=Clytia hemisphaerica|type=transcript|length=182bp|location=Sequence derived from alignment at sc0001891:40667..40848 (Clytia hemisphaerica)
GGGGAGTTTAACAATAGTTTTTACAAATTGCATATTTTATAGTCTCCTGT
GCAAGGTTTACACAGGTAAAGAAGTAGCTTTAGTCTTCTTGTTGGTTTTA
TTATATAGTCTGCTGTGCAAGGTTTACACAGTTATAGAAATAGCTTTATT
ATATAGTCTCCTGTGCAAGGTTTACACAGGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023173XLOC_023173Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038606-exon-sc0001891-1491911889:40667..40848TCONS_00038606-exon-sc0001891-1491911889:40667..40848Clytia hemisphaericaexon
TCONS_00038606-exon-sc0001891-1510915933:40667..40848TCONS_00038606-exon-sc0001891-1510915933:40667..40848Clytia hemisphaericaexon
TCONS_00038606-exon-sc0001891-1575043694:40667..40848TCONS_00038606-exon-sc0001891-1575043694:40667..40848Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001891supercontigsc0001891:40667..40848 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038606 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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