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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038363 ID=TCONS_00038363|Name=TCONS_00038363|organism=Clytia hemisphaerica|type=transcript|length=1596bp
ATGTTCTTACAAAATCTCACTTCTAAAGTTTTCAAATAGTCAGATCATTT
CGAAAAGGAgagtaaaaaaatgaaaacttcttttttttgcttgaaataca
GTATGGTAAAAGTCCCTCCGCACCTTGCACTAAAAAGGCATGAACAATTA
AAATTCTCAAACCATTTCATTACTACCAGATAACTTGAAAAATAATAACT
GACAAAGAGTAAAATAAAATACACGGGTCTGATTCAAaagagtgaaaaaa
attctatcaaCCAAAATGTAACCCTAACAGTTCCTAAAGTGATCTTTCTT
TTGGCCAGGAAAATCCAGAATTAGACTACAAATTACATCTTGTCAATATT
AGCAAAAGATCACCAAACCCAAGGTTATGGGAGTAATCTTTGGCAGATAA
AGTATCAGCTCTGAAAGAAATTTAGgaaattttcatgataaaaaagtaac
aaaaggGGACACAATCGATGCAATCAGAAGATAGAAATAATACAAtattt
ttgctctaaaagataATTATAGCTATATACGGAATATATGGAAAAGTCTC
AGATTCATATGAGAATTTAGGTACTAAGACCTTTTCTCAAAGACACTTCa
gcttttttagaaattttattctcAGTTTGTTTTAGTTTAGCAGCTTGAAT
CCATGCTGTAACAAAGGATCGTATGCGTAAATTGacccattttttcaaaa
ttatttcctTCAACATGACTCTAAGTTTTTCATTCAGAATCATCCTGCTT
AATGAGGCCCATGTACCTTCAATGAAGGTGCTTTTCATGAGCTTCTCTAA
AATCAGGTCTCTCAAGTCCTCTCCACGGTAATTTTCGATTAATGCAACAT
TCAAGACTTCACGTACAGCTATCTCGATTCTTTTTATGAACACATAAAAA
GGTTCTTTCACAATCATCAATCCCCCACGATTTATTCGATTTGTCCATGA
TAGCGTATACTCGTAAAAATCACTTGTATCTTCATTGTCACCATCAAGAC
ACCATGCATTGACTACTTGAAGAGCAGCCCTCTTAAGATTCGACTCTTTC
ACCCgtgaaaacctttttttgaggGAATAGGGAATAAAACCACTCACATA
TCTGAGGACCTTTTCCTCTTCAGGTGATAAGCTTAGTTTAGTATGGTCAA
CTTCAGAGATTTCAATGAGTTTATCGTTTTTCCATTTCAGAATCaaagat
aatgtttttgttACCATGAAGGTGTAAAGAATATCAAATCCTTCGTTCAA
TTGTAGCTTATCGAATATTGCCCTGAATTTACTCCTTCCGGATTTGCTAA
CACTGACTTGAGAAAACTTTGTGCATCCTATTTGTCTAGCCTCTGAACAG
TAGTCGGTGTTCACACAGGGGATTAAAAGGTCTTGAATGTGTGCAGCAAA
ATCTGAGATTTCTTTGGAAACACTCTCAGATTTCTCCTGTATTATTTTCG
CTGATTTAACGGCATAATTTCCTGGAGTCAGCACTTCTTCATGTCTGAGG
TTTAGGATCTTATCATTGATTGCCAAATCCAATGCTATTGAGAAATGATT
CCCTGCTTCTGCTTGTAAGGGTACCAGCTCTTGTCGATTTAGcact Run BLAST on NCBI transcript from alignment at sc0001833:28003..29661- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038363 ID=TCONS_00038363|Name=TCONS_00038363|organism=Clytia hemisphaerica|type=transcript|length=1659bp|location=Sequence derived from alignment at sc0001833:28003..29661- (Clytia hemisphaerica)
ATGTTCTTACAAAATCTCACTTCTAAAGTTTTCAAATAGTCAGATCATTT
CGAAAAGGAGAGTAAAAAAATGAAAACTTCTTTTTTTTGCTTGAAATACA
GTATGGTAAAAGTCCCTCCGCACCTTGCACTAAAAAGGCATGAACAATTA
AAATTCTCAAACCATTTCATTACTACCAGATAACTTGAAAAATAATAACT
GACAAAGAGTAAAATAAAATACACGGGTCTGATTCAAAAGAGTGAAAAAA
ATTCTATCAACCAAAATGTAACCCTAACAGTTCCTAAAGTGATCTTTCTT
TTGGCCAGGAAAATCCAGAATTAGACTACAAATTACATCTTGTCAATATT
AGCAAAAGATCACCAAACCCAAGGTTATGGGAGTAATCTTTGGCAGATAA
AGTATCAGCTCTGAAAGAAATTTAGGAAATTTTCATGATAAAAAAGTAAC
AAAAGGGGACACAATCGATGCAATCAGAAGATAGAAATAATACAATATTT
TTGCTCTAAAAGATAATTATAGCTATATACGGAATATATGGAAAAGTCTC
AGATTCATATGAGAATTTAGGTACTAAGACCTTTTCTCAAAGACACTTCA
GCTTTTTTAGAAATTTTATTCTCAGTTTGTTTTAGTTTAGCAGCTTGAAT
CCATGCTGTAACAAAGGATCGTATGCGTAAATTGACCCATTTTTTCAAAA
TTATTTCCTTCAACATGGCTCTAAGTTTTTCATTTNTGCGTAAATTGACC
CATTTTTTCAAAAATTTTTCCTTCAACATGACTCTAAGTTTTTCATTCAG
AATCATCCTGCTTAATGAGGCCCATGTACCTTCAATGAAGGTGCTTTTCA
TGAGCTTCTCTAAAATCAGGTCTCTCAAGTCCTCTCCACGGTAATTTTCG
ATTAATGCAACATTCAAGACTTCACGTACAGCTATCTCGATTCTTTTTAT
GAACACATAAAAAGGTTCTTTCACAATCATCAATCCCCCACGATTTATTC
GATTTGTCCATGATAGCGTATACTCGTAAAAATCACTTGTATCTTCATTG
TCACCATCAAGACACCATGCATTGACTACTTGAAGAGCAGCCCTCTTAAG
ATTCGACTCTTTCACCCGTGAAAACCTTTTTTTGAGGGAATAGGGAATAA
AACCACTCACATATCTGAGGACCTTTTCCTCTTCAGGTGATAAGCTTAGT
TTAGTATGGTCAACTTCAGAGATTTCAATGAGTTTATCGTTTTTCCATTT
CAGAATCAAAGATAATGTTTTTGTTACCATGAAGGTGTAAAGAATATCAA
ATCCTTCGTTCAATTGTAGCTTATCGAATATTGCCCTGAATTTACTCCTT
CCGGATTTGCTAACACTGACTTGAGAAAACTTTGTGCATCCTATTTGTCT
AGCCTCTGAACAGTAGTCGGTGTTCACACAGGGGATTAAAAGGTCTTGAA
TGTGTGCAGCAAAATCTGAGATTTCTTTGGAAACACTCTCAGATTTCTCC
TGTATTATTTTCGCTGATTTAACGGCATAATTTCCTGGAGTCAGCACTTC
TTCATGTCTGAGGTTTAGGATCTTATCATTGATTGCCAAATCCAATGCTA
TTGAGAAATGATTCCCTGCTTCTGCTTGTAAGGGTACCAGCTCTTGTCGA
TTTAGCACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038363-exon-sc0001833-1575043694:28948..29661 | TCONS_00038363-exon-sc0001833-1575043694:28948..29661 | Clytia hemisphaerica | exon |
| TCONS_00038363-exon-sc0001833-1575043694:28003..28884 | TCONS_00038363-exon-sc0001833-1575043694:28003..28884 | Clytia hemisphaerica | exon |
| TCONS_00038363-exon-sc0001833-1510915933:28948..29661 | TCONS_00038363-exon-sc0001833-1510915933:28948..29661 | Clytia hemisphaerica | exon |
| TCONS_00038363-exon-sc0001833-1510915933:28003..28884 | TCONS_00038363-exon-sc0001833-1510915933:28003..28884 | Clytia hemisphaerica | exon |
| TCONS_00038363-exon-sc0001833-1491911889:28948..29661 | TCONS_00038363-exon-sc0001833-1491911889:28948..29661 | Clytia hemisphaerica | exon |
| TCONS_00038363-exon-sc0001833-1491911889:28003..28884 | TCONS_00038363-exon-sc0001833-1491911889:28003..28884 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001833 | supercontig | sc0001833:28003..29661 - |
Blast
The following BLAST results are available for this feature:
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