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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038276 ID=TCONS_00038276|Name=TCONS_00038276|organism=Clytia hemisphaerica|type=transcript|length=754bp
TGAGTATTAAACTATGTATAGCGTTAAACCATCGAACAACAAAAGGTAGA
CGAAAGCAATATTTACGACATACCAAAACAAATACCGAGCCAGTTTAAAC
CAGTATCGTGtaatcaaaatttacaaatcAAATCTTTCACATTTGTGCCT
TCGCTTCGTATTTCTGTTTTGTTGATTCGAAATGATTGATGTCAAAAACT
GtaATATATCGACTGTACAGCCTTCAACGTTATGTGGTGTATACAGATAA
AGTTGATTGGTTCAAAGCTGAAAAAAACTGCAAAAGGATTGGTGGAGAAT
TGTTGACGATCAACGATAAGAATGAACATGActttattttcaaagtttta
aaaaaGAAATTTGCTCTGTATGAATATTGGATTGGCTTAAACGATATAGC
CAAAGATTTTGAGTTTGTTTGGTCCGGACAGCCTAAGAAATTCGTAGGAT
ACATAAATTGGTGTGGAAGTGGACATGACACCAGTGATCCCCATTGTTTT
GCAGCTCACATGCGTGGTCATATGTGGAATAGAATGTGTTTGCGTCATGA
ACTATGTTCGTACCGTAAAGCGTACATTTGTGAGAACCGAAAGCCTTTAA
AACTAAAAGCAAGAACTTAAAAGCAAATATCTAATATCTTTAGTTATCTC
TACGACTGAtctatattttttcatttaaaaagtcGAATCGAATCGGATTC
ATATCCCCGATGCCGTTTGAAGGTAAATGgaaaagggttaaaaatcaTCG
ACTA Run BLAST on NCBI transcript from alignment at sc0001817:31061..33625- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038276 ID=TCONS_00038276|Name=TCONS_00038276|organism=Clytia hemisphaerica|type=transcript|length=2565bp|location=Sequence derived from alignment at sc0001817:31061..33625- (Clytia hemisphaerica)
TGAGTATTAAACTATGTATAGCGTTAAACCATCGAACAACAAAAGGTAGA
CGAAAGCAATATTTACGACATACCAAAACAAATACCGAGCCAGTTTAAAC
CAGTATCGTGTAATCAAAATTTACAAATCAAATCTTTCACATTTGTGCCT
TCGCTTCGTATTTCTGTTTTGTTGATTCGAAATGATTGATGTCAAAAACT
GGTAAGTCGATAAATAACCAAAATGAAATTCAAAAAAATTCATGATGTTT
TAAATCTGTTTGAGTGGAAATGATTTATCTACAGACTATCACATATTATA
AATGGCATGAAATGAAGAGCCTTCTCCCAAAAAAAGGGTCGCTACACAGG
GACGTTTAGTTAGACCGTTAGGACTAGAGTTGAAGCTTTAAACTTTCCAA
AGCAAAAAAAAGTCAAACCTTAATGTTTTTGTGTCGCATTTAGAAATTAC
ACTTTCTTTGTTTACATGTGGCATATTTTAATTGGAAAAATAATTTTCTT
TTCATTTTTTCCTTTTCTTAGGTCTAAAAATGCATAGGGTTGATGCGATT
GCTGTTTTTTCCATGATTTTTATGATTGGAGTGGGTTGCTCAAAACCGAC
AGGTTAGTAGCCGGTACCTGTCTGATCACATTAGTTATTGTCTGCCAGCT
TACACTACAGAAATTATCATTAATAACTTCACCATACCATTAACCATTAA
CAATGTTTTTCAGTACAGAAAAGAGCTTGGTACAATTTAACACTCCTACT
TTGTCAAAGGAAGTGAGGGTGCACTTAGCCAAAAATTGGATACGGGGACG
TGCCGCTGGTCAGGGTCACTTTTTTAAGCTCTGAAGATATTTGACAGGGT
CTCAAATTTACTAATTTTCACATGTATATCTGACAGGGTCGAGTTTTACT
TATTTTAGTCAATTTTCAAGATAGAAAGAAGAAAACTTTTCAAAATTTTC
GTTTAATTTTAGTCATTTTTACCATTTTTTGAAATTTTTCGATTTTTTTG
CTCTGACAGGGTCCAATTACCAAATATCCATATCTGACAGGGTATACTTT
TTAAACTTCAGAGACACGTCCCCGTCGCTCGAAAAGGTCAGTGCCCCCCG
GACATGTTTCATGCTTCTTTCAATATTTTGGGGAAATTACCTCTAGAAAT
TTACCCCTTAATATCGGAATGAAAAATGTCCGTTTGGCTCAAGTTATTGT
TGGTATAATTTATTTTTTAGTAATATATCGACTGTACAGCCTTCAACGTT
ATGTGGTGTATACAGATAAAGTTGATTGGTTCAAAGCTGAAAAAAACTGC
AAAAGGATTGGTGGAGAATTGTTGACGATCAACGATAAGAATGAACATGA
CTTTATTTTCAAAGTTTTAAAAAAGTAAGTTTTTCTTTACTCTGTGGGCG
GCAGACAAAGTTCCGCTCAAAATTATAACCTTTGCATCTTGGTGATTTGT
GTCTAGAGTCTAACACTGATCACGATATCACGCAATTTTTTTGTTTTTAA
TCACGATCACGCAAATCAGTAAAAAACTTAATCACGCATCTCTTTGAAAA
AGTCCAAATCACACACCACGGCTCCAAAAAAATTCAAATCACAATCAAGT
TTTGACGTCTGATCACGCAGTTACGAAAAAGAAATTTCCGAATCACCTTC
TTACGCTAGAAAAGTCCTATCACGACATCACGCAAATAGCTTAGGGTATC
TGTACAATGATAGAATAGCTCAGATATATCTTACCCTATTAAAATAAAGC
CAATTTTGTGACAAAAACTTTGCCGAAAAAGTAAGAAACTTTAACTCCTT
GACGTTCTCAAAAAGCTAAAAAATCGCATTTTTAAGATTTTTCAATGCTT
AAACTTTGAATCGAATTATCTAAGCTTTGTAATCTTTGGTTACGTTCGAA
GGCTTTTTCAGAGCTCTATCTTTTAAGCGTGCCAGATTCTTGAATTAGGT
CCTTAATCAAAACTACCGGCGCCGAAAGTATCTCCTTGTTTAACAAAATT
TTGCTGATGGGGCGTCAAAAAATGACGTAAAAAGGGTAAAATAGTTTTCC
ATAAGCAAAGATTAGCTTTTAAAATTGTTTCCTATTAAAAATCAAAAATT
GCCGACTTTATCTGTTGAGCCCATACCCACATACCCACATACTATAAAAA
AGTTTTTCTTCTTTAGGAAATTTGCTCTGTATGAATATTGGATTGGCTTA
AACGATATAGCCAAAGATTTTGAGTTTGTTTGGTCCGGACAGCCTAAGAA
ATTCGTAGGATACATAAATTGGTGTGGAAGTGGACATGACACCAGTGATC
CCCATTGTTTTGCAGCTCACATGCGTGGTCATATGTGGAATAGAATGTGT
TTGCGTCATGAACTATGTTCGTACCGTAAAGCGTACATTTGTGAGAACCG
AAAGCCTTTAAAACTAAAAGCAAGAACTTAAAAGCAAATATCTAATATCT
TTAGTTATCTCTACGACTGATCTATATTTTTTCATTTAAAAAGTCGAATC
GAATCGGATTCATATCCCCGATGCCGTTTGAAGGTAAATGGAAAAGGGTT
AAAAATCATCGACTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038276-exon-sc0001817-1575043694:33425..33625 | TCONS_00038276-exon-sc0001817-1575043694:33425..33625 | Clytia hemisphaerica | exon |
| TCONS_00038276-exon-sc0001817-1575043694:32252..32405 | TCONS_00038276-exon-sc0001817-1575043694:32252..32405 | Clytia hemisphaerica | exon |
| TCONS_00038276-exon-sc0001817-1575043694:31061..31459 | TCONS_00038276-exon-sc0001817-1575043694:31061..31459 | Clytia hemisphaerica | exon |
| TCONS_00038276-exon-sc0001817-1510915933:33425..33625 | TCONS_00038276-exon-sc0001817-1510915933:33425..33625 | Clytia hemisphaerica | exon |
| TCONS_00038276-exon-sc0001817-1510915933:32252..32405 | TCONS_00038276-exon-sc0001817-1510915933:32252..32405 | Clytia hemisphaerica | exon |
| TCONS_00038276-exon-sc0001817-1510915933:31061..31459 | TCONS_00038276-exon-sc0001817-1510915933:31061..31459 | Clytia hemisphaerica | exon |
| TCONS_00038276-exon-sc0001817-1491911889:33425..33625 | TCONS_00038276-exon-sc0001817-1491911889:33425..33625 | Clytia hemisphaerica | exon |
| TCONS_00038276-exon-sc0001817-1491911889:32252..32405 | TCONS_00038276-exon-sc0001817-1491911889:32252..32405 | Clytia hemisphaerica | exon |
| TCONS_00038276-exon-sc0001817-1491911889:31061..31459 | TCONS_00038276-exon-sc0001817-1491911889:31061..31459 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001817 | supercontig | sc0001817:31061..33625 - |
Blast
The following BLAST results are available for this feature:
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