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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038064 ID=TCONS_00038064|Name=TCONS_00038064|organism=Clytia hemisphaerica|type=transcript|length=349bp
CCCCCCCCATGATCAATAAATCATGTAGTTTGGTTTTCTTATTAGAAATC
CATTGAAATGTTACTTTATCATTTATAGCACAATATATAAAAAGCTGGAA
AATGGAAAAGGAAAACCAACcaataaatgaaaatgattcTACAGtgattc
tcaataaattttatttgagaCATTAACGATGAAAGTTCACCTCCTTTAAT
TCATTTCAATGTTTTAAATTGACGGATTGACGCTACTCGAAACATGACTG
ACTTACGTGACTATTTGTATGACTGTAGACTGACAGTTACACGGTTACAC
TAAAACACTATTTGAAACATGACAACATCTGGAAATCACTCCTCCTGCA Run BLAST on NCBI transcript from alignment at sc0001766:18511..20378+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038064 ID=TCONS_00038064|Name=TCONS_00038064|organism=Clytia hemisphaerica|type=transcript|length=1868bp|location=Sequence derived from alignment at sc0001766:18511..20378+ (Clytia hemisphaerica)
CCCCCCCCATGATCAATAAATCATGTAGTTTGGTTTTCTTATTAGAAATC
CATTGAAATGTTACTTTATCATTTATAGCACAATATATAAAAAGCTGGAA
AATGGAAAAGGAAAACCAACcaataaatgaaaatgattcTACAGGCAAGG
CATGGGCTCAGTGAGCTTAATTTGTCAATccctttactttacaaaaacTT
TTGCTTTCAGAAAATTTAACGAATCAGATCATTTGCGAAGTTGAGTGTTT
TATTAATGGAATCTAAATTCGCAAATCCCCCAAATTTGTTCAGGAAGTTG
ATTCGTGCTAAATTGGATTCCCcatgcaaaaatgaaaatacctaAGGTAA
AAGCATCTAATGTGNTCGCTAAATTGGATTCCCCatgcaaaaattaaaat
acctAAGGTAAAAGCATCTAATGTGCAATTCAAAATTCTGTGACATTTAA
ACCAGAGATTTGAAAAAGGGATGTAAGAAAGGAGTTTATTCTAAACTTCA
AGAGCTCAAGAGCTAGAATCTCACAATGTCTGTTTGTCTCAAACAACGAC
AGCTAAAGAAGGTACAATGTTTTGAATAGAAAGCGGCCATCTTTATTTAG
TTTGTCTATATTTGTCGGCTACCGGCATTTTACGATCACACGCTTTTGTA
AACAGGGCGGACCTAGCTATGATCCTTATAATATAACTTTACGTTCAAAC
CAGATACACATGGTTTTATAGTCACTTTCTTTCTTATTAACGAAGCTATT
ACTCCCATAAGAGAAATGACCAAAGAAACACTTCATCTTTAATTTTGAGT
ACCTTCTGTCGCTTCTGTAAACGCCATTgagaaaaacattcaaaaattgt
cgaattttcctaaaatttggtacacttgTACTTTGGGTGAATGTCTATGG
GAATTCATATTTCAGTTCtttaatttttggtttttagggtctgggacgag
tttttcctcaaaacgaggctaaaaattttgaactGAACTGACTATTCAAC
TCACTTAAATCGGagtaaaaaattttattatcataAAAAgacattgggct
attccattgcCCCCTAAAACTAAACAATGTAATATTGTATTATTGAGGAA
GAAAAAATCTGTCTGAGaggaaaaagaagaacttttaCCTTTTTTCGGCG
CACTCTAGAATACTTTGGCAAGAAGATTTTATGAATGCTTAAGAAGTCGT
TGTtataattatttctcaatcaAAGGTTTCAAAGAAGCATAGTGTTTCAT
AGCCTCTTGAACAAAATGAGTTGAAAAGGCGATTCGTAtctccatttttc
aaatttctgaaaGTATTCACTTCTTTTGTCTACgcacatttttttttcag
tgattctcaataaattttatttgagaCATTAACGATGAAAGTTCACCTCC
TTTAATTCATTTCAATGTTTTAAATTGACGGATTGACGCTACTCGAAACA
TGACTGACTTACGTGACTATTTGTATGACTGTAGACTGACAGTTACACGG
TTACACTAAAACACTATTTGAAACATGACAACATCTGGAAATCAGTAAGT
TTTATTCCGTTATAGTTCAGGAGTAAAAACTGTCTTCAATCTGTATTGTG
TTTGGAATATTCAACATCGAGACAGAATGCTCGCAAAAATTGATTGTACG
AGAAGAAAAATATAGaagacaagaaatttttcttcgcACTCTTTGACCTT
TTTAATACGCTGTATCAGGGGAAGAAAGATACATTTACTGATaactttgg
agaaaaaaatcccTCTAGTCCATTTTTTCATCTAAGGAGTATCAAAGAAA
TCTTTTTACTGTATGATTCCCTGTGATTGATAttcctttcttctttttgt
ttcacAGCTCCTCCTGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038064-exon-sc0001766-1491911889:18511..18654 | TCONS_00038064-exon-sc0001766-1491911889:18511..18654 | Clytia hemisphaerica | exon |
| TCONS_00038064-exon-sc0001766-1510915933:18511..18654 | TCONS_00038064-exon-sc0001766-1510915933:18511..18654 | Clytia hemisphaerica | exon |
| TCONS_00038064-exon-sc0001766-1575043694:18511..18654 | TCONS_00038064-exon-sc0001766-1575043694:18511..18654 | Clytia hemisphaerica | exon |
| TCONS_00038064-exon-sc0001766-1491911889:19861..20054 | TCONS_00038064-exon-sc0001766-1491911889:19861..20054 | Clytia hemisphaerica | exon |
| TCONS_00038064-exon-sc0001766-1510915933:19861..20054 | TCONS_00038064-exon-sc0001766-1510915933:19861..20054 | Clytia hemisphaerica | exon |
| TCONS_00038064-exon-sc0001766-1575043694:19861..20054 | TCONS_00038064-exon-sc0001766-1575043694:19861..20054 | Clytia hemisphaerica | exon |
| TCONS_00038064-exon-sc0001766-1491911889:20368..20378 | TCONS_00038064-exon-sc0001766-1491911889:20368..20378 | Clytia hemisphaerica | exon |
| TCONS_00038064-exon-sc0001766-1510915933:20368..20378 | TCONS_00038064-exon-sc0001766-1510915933:20368..20378 | Clytia hemisphaerica | exon |
| TCONS_00038064-exon-sc0001766-1575043694:20368..20378 | TCONS_00038064-exon-sc0001766-1575043694:20368..20378 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001766 | supercontig | sc0001766:18511..20378 + |
Blast
The following BLAST results are available for this feature:
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