XLOC_022724 (gene) - C. hemisphaerica

Overview
NameXLOC_022724
Unique NameXLOC_022724
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001766:18511..22436+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022724 ID=XLOC_022724|Name=XLOC_022724|organism=Clytia hemisphaerica|type=gene|length=3926bp|location=Sequence derived from alignment at sc0001766:18511..22436+ (Clytia hemisphaerica)
CCCCCCCCATGATCAATAAATCATGTAGTTTGGTTTTCTTATTAGAAATC CATTGAAATGTTACTTTATCATTTATAGCACAATATATAAAAAGCTGGAA AATGGAAAAGGAAAACCAACcaataaatgaaaatgattcTACAGGCAAGG CATGGGCTCAGTGAGCTTAATTTGTCAATccctttactttacaaaaacTT TTGCTTTCAGAAAATTTAACGAATCAGATCATTTGCGAAGTTGAGTGTTT TATTAATGGAATCTAAATTCGCAAATCCCCCAAATTTGTTCAGGAAGTTG ATTCGTGCTAAATTGGATTCCCcatgcaaaaatgaaaatacctaAGGTAA AAGCATCTAATGTGNTCGCTAAATTGGATTCCCCatgcaaaaattaaaat acctAAGGTAAAAGCATCTAATGTGCAATTCAAAATTCTGTGACATTTAA ACCAGAGATTTGAAAAAGGGATGTAAGAAAGGAGTTTATTCTAAACTTCA AGAGCTCAAGAGCTAGAATCTCACAATGTCTGTTTGTCTCAAACAACGAC AGCTAAAGAAGGTACAATGTTTTGAATAGAAAGCGGCCATCTTTATTTAG TTTGTCTATATTTGTCGGCTACCGGCATTTTACGATCACACGCTTTTGTA AACAGGGCGGACCTAGCTATGATCCTTATAATATAACTTTACGTTCAAAC CAGATACACATGGTTTTATAGTCACTTTCTTTCTTATTAACGAAGCTATT ACTCCCATAAGAGAAATGACCAAAGAAACACTTCATCTTTAATTTTGAGT ACCTTCTGTCGCTTCTGTAAACGCCATTgagaaaaacattcaaaaattgt cgaattttcctaaaatttggtacacttgTACTTTGGGTGAATGTCTATGG GAATTCATATTTCAGTTCtttaatttttggtttttagggtctgggacgag tttttcctcaaaacgaggctaaaaattttgaactGAACTGACTATTCAAC TCACTTAAATCGGagtaaaaaattttattatcataAAAAgacattgggct attccattgcCCCCTAAAACTAAACAATGTAATATTGTATTATTGAGGAA GAAAAAATCTGTCTGAGaggaaaaagaagaacttttaCCTTTTTTCGGCG CACTCTAGAATACTTTGGCAAGAAGATTTTATGAATGCTTAAGAAGTCGT TGTtataattatttctcaatcaAAGGTTTCAAAGAAGCATAGTGTTTCAT AGCCTCTTGAACAAAATGAGTTGAAAAGGCGATTCGTAtctccatttttc aaatttctgaaaGTATTCACTTCTTTTGTCTACgcacatttttttttcag tgattctcaataaattttatttgagaCATTAACGATGAAAGTTCACCTCC TTTAATTCATTTCAATGTTTTAAATTGACGGATTGACGCTACTCGAAACA TGACTGACTTACGTGACTATTTGTATGACTGTAGACTGACAGTTACACGG TTACACTAAAACACTATTTGAAACATGACAACATCTGGAAATCAGTAAGT TTTATTCCGTTATAGTTCAGGAGTAAAAACTGTCTTCAATCTGTATTGTG TTTGGAATATTCAACATCGAGACAGAATGCTCGCAAAAATTGATTGTACG AGAAGAAAAATATAGaagacaagaaatttttcttcgcACTCTTTGACCTT TTTAATACGCTGTATCAGGGGAAGAAAGATACATTTACTGATaactttgg agaaaaaaatcccTCTAGTCCATTTTTTCATCTAAGGAGTATCAAAGAAA TCTTTTTACTGTATGATTCCCTGTGATTGATAttcctttcttctttttgt ttcacAGCTCCTCCTGCAAAAGCAAAGAAATTGATGCCAGTCGACTACAG TCTACCAAGACTGAAAGTATGTTTATTAAATATTCGTTTAATTCATTGAG CAGACATTTTAACTTCCTTATTCAACTCGTTTTCGTATTACCTTGTAAGT ATTTTTaatgtgtttctttttatttaaaaaatagtaCTATTATTCTTCTT TTACTTTAGAAGTGCAAAGAATGCGGCGTTTCTGCTAAATCAAATAATTC AAAGGTTTGTACCAATGGCCACCCGTTCACGAGAAAGAAAAAGCCGCCAA TCGAGTGCGTGCCAGCGGGCATGACCCAGGTCACCGATGTCAGGCATAAT TGGGAgacaaatgtaatttttttttcataattaaaaTTTCCATTCGAGGA ATTGTTTAAAGGCATTATCGGTTATGATCCTTGGGAAGTTAAATTAAATT ATGACTGACTGCACATGTACGCTGTATAGTTTTgcagcatttttattttt ataNATTTgcagcatttttatttttattagaatatttAAATTGCATAATG GTGGAAGAATCATTTTGGTCAATAGAACTGATTGATAATTCTTGAATAAT GAATCCACTTTTTATTTCTGTTTCTTCTGTTTCTTCGcttaaaaagccat aaaatTCCACAGATTGGTTGTACCCTTAATTATCAACCTAAACGTTATTC ATTGCTTTTTGTTTCAGTCACACACATTGCATCAACACCATAGTCTGCAT TCGGTAACActctttggaaagaaaactAAAAACGGTTACCAGTTCAGTCA CCTTTCAACACCAGGGTTTGGCAATAGCATCCTCAACAACCAGTTCGGGG ATGCTATCAAGAACGTTTTTGAGGAGCAATTCATGGACGGTAAGTATTCT TTGCTTCATAACCTATATTGCTAATTGATTGCTTGTGTTAATAATATTat tttgttaaccggttactttttcgaagcgggctacacgactttttgcgcaa tgcaattggttcttttcgcacgACNATTattttgttaaccggttactttt ccgaagcgggctacacgactttttgtgcaatgcaattggttcttttcgca tgtcgacgggcctacattgtccagagttgcccgtcgttaggaaaattcat tgtgacgtcactttttcaaaggaatgaACAATgtgttgacatcatttctc caattttttcggtctactgaaaatattgccctcggtcaacgcaacaacct cgcaagctcggtcaacgcaacaacctcgcaagctcgaccgtcacttgacc tcgggcaatatttctcagtacagccctcactaaccagtcattattgtatt aataatAGTTTTCACACGGGTGTGATTTACTGATTTTTTCCTTTGATAAG TACTAGTGATAACATGGTTttgagggtgatttgggattaataaccccgag gttcattgaaaacatttcaaaatagcccaaACGTAGTGTTTTCAATGTTT TAGTTTTTGGTGCACATAGCCGTTTTAACAGTAGACCTTCTATACCAAAC TTTATGGTGATAGAAATATAttaatcaaaaagattttcaaaattttacgc atttctgacgtttttgtaacgtcattggttaaaaaatgttgaaaagtgaa gcaattccattgggcaaatctgacgtaacggtttaaaaaagttgaacttc ttccacctttttattttttcgctcgaaaatcttttaatgacgtaatcttt tctgtaggcaaaaacagttgtaaaaaaagttttcgctcattaCGCGCGAG AGTGGAGGCCTTTATTCTCTGATCTTTCCTTTTCCTCTTTTAGCCTATCC TTTACAGAAAAAGACGCAACCATCAACGACAACGAAACCAAATGCTGGCT CTTCCACGACAACCAAATCAGACGCTCTGGCATCTACGACATCTACgaca gaaaaagatttttatagcGTGGAAGAAGTTTTAACTATGACtgacaattc atgatattcatgatgtagcCTTTTTCACTTCCGTAATattattcaaaaca tttgatAGCCATTATTAGCGGCAACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038064TCONS_00038064Clytia hemisphaericatranscript
TCONS_00038065TCONS_00038065Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038065-proteinTCONS_00038065-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001766supercontigsc0001766:18511..22436 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 9.69 11.6 6.98 8.41 4.2 4.73 7.04 5.07 3.82 5.97 1.33 2.07 0.16 0.43 0.11 0 0.11 0.11 0 0.05 1.11 4.24 0.07 0.08 0 0.06