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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038014 ID=TCONS_00038014|Name=TCONS_00038014|organism=Clytia hemisphaerica|type=transcript|length=1072bp
ttaaggaTGAATACTAAAAAATCAAAGGTTACTGCTGCATCATTTGGATC
TTTTCTTCTTCAAGCTggtgagaaaaagaaaagaaaaaaaagacgtCCAT
TGGTAATTGTTTATGAAAGAGATCATGAAGGGAAGAAGAGTgtacaaaaa
taataaacgcTATAAAAGAAGAAACCAAGCTGAATATTCCGACCTTGATA
CTGTAACTTGTGATGACAGTGAAATTGAAGGTAAAAGTTTTACacatttt
aaagaagatatttttattgtaccgggtgtcccagaaaaaagttctgctct
ttgaagtgaattttctaaAGTCCTATGAATTTGTAACAATCAATaatttt
gcattggaaagaggaaggatagTGTTTACAacttttggtttgattttccc
caaattttagtcaaaatttctggaaattgtgaccctttgagagaaatttt
ttttgatatttgtgattttgggacagTTTGGGACCCTtaaaaatttgtac
ccctttgagaaaTTTGaggcatttaaaaaatgtacccttatggctcgcac
atatccgacacccattttgcctaagtagtGTGAATAGATATCGGAGAAAT
TCTTTTCTGAGGTTGCGGAAAGCTTCAATTTTCTAAAAGACTTTCAATGG
GTGAAATTGAAAAGAGGCAAATCGAGACAATATGAAAATCAGGAGGCTTG
GAACGAGCAAAAGACTATTGGACTCAAAGTTATCTAGAGAGAGAATTTGT
GAAAAATTCTTGTTCGAAATGCAATACTTTGAACGCATTGATCTTTTGTG
GAGATTGCTGgtcttttttttgttctttgtgTGATGTGAATTTACATTCA
AAGCATACTTTTCACAATCGGAAAGCATTATTGAATGGATTTTTCAAGCC
AATTTCTCCAAATGAGTATATAGCCGACGATGGTATACAGATAGGGAGTA
AGTAAAATGGCGAAatagtttttttatcaatttttcctttttgaatTGAA
GTCAAAAATGATTAAATGAAAACCTCACTCTATTTTCTGAGTTGAAATCA
ATGATTTTAGTACAATATTatt Run BLAST on NCBI transcript from alignment at sc0001757:31311..32899- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038014 ID=TCONS_00038014|Name=TCONS_00038014|organism=Clytia hemisphaerica|type=transcript|length=1589bp|location=Sequence derived from alignment at sc0001757:31311..32899- (Clytia hemisphaerica)
TTAAGGATGAATACTAAAAAATCAAAGGTTACTGCTGCATCATTTGGATC
TTTTCTTCTTCAAGCTGGTGAGAAAAAGAAAAGAAAAAAAAGACGTCCAT
TGGTAATTGTTTATGAAAGAGATCATGAAGGGAAGAAGAGTGTACAAAAA
TAATAAACGCTATAAAAGAAGAAACCAAGGTACATCAAATCCTCAAAATG
AGCCCGTTTGTGATTGAATTTTTGATTTTTTAGTTTGCCACCCGATGTTC
CCTCATCTTTCAGCTGGTGGTCATGGCAACAGACATTCTCAAACTTTCAG
AAGTTTACTTTTCATTATTACCAGGACTGTGGAAAAAGATATTCTGCCAT
GTAGGATCAGTAGGCTTTTTTATATTAACAAAAGCATAGGGTTCCAGGTT
CCACCTTGTGAGCAGATTATCATTATATAATAAAAAGGATACTTGATATT
ACACACTATTAAGTAATATTCATGCCAACCCCCCCCCCAAATTGTGAATT
TTTTAATTTTCTAACCAACCCTCGTGTGCTAGAGCTGTCTCTTAATAAGT
CACATTCCTTCAGGGTAGTAATGCAATTATTGTATATGAATAACCTGAAA
ATTTCCTTCGCTTCTATAATTTCTTTGTTGTGTTTTTGATGTATTTGTCA
AATGATTTATTAATAAAGAACATTTTTTGCAATTTCTTCAAATCAGCTGA
ATATTCCGACCTTGATACTGTAACTTGTGATGACAGTGAAATTGAAGGTA
AAAGTTTTACACATTTTAAAGAAGATATTTTTATTGTACCGGGTGTCCCA
GAAAAAAGTTCTGCTCTTTGAAGTGAATTTTCTAAAGTCCTATGAATTTG
TAACAATCAATAATTTTGCATTGGAAAGAGGAAGGATAGTGTTTACAACT
TTTGGTTTGATTTTCCCCAAATTTTAGTCAAAATTTCTGGAAATTGTGAC
CCTTTGAGAGAAATTTTTTTTGATATTTGTGATTTTGGGACAGTTTGGGA
CCCTTAAAAATTTGTACCCCTTTGAGAAATTTGAGGCATTTAAAAAATGT
ACCCTTATGGCTCGCACATATCCGACACCCATTTTGCCTAAGTAGTGTGA
ATAGATATCGGAGAAATTCTTTTCTGAGGTTGCGGAAAGCTTCAATTTTC
TAAAAGACTTTCAATGGGTGAAATTGAAAAGAGGCAAATCGAGACAATAT
GAAAATCAGGAGGCTTGGAACGAGCAAAAGACTATTGGACTCAAAGTTAT
CTAGAGAGAGAATTTGTGAAAAATTCTTGTTCGAAATGCAATACTTTGAA
CGCATTGATCTTTTGTGGAGATTGCTGGTCTTTTTTTTGTTCTTTGTGTG
ATGTGAATTTACATTCAAAGCATACTTTTCACAATCGGAAAGCATTATTG
AATGGATTTTTCAAGCCAATTTCTCCAAATGAGTATATAGCCGACGATGG
TATACAGATAGGGAGTAAGTAAAATGGCGAAATAGTTTTTTTATCAATTT
TTCCTTTTTGAATTGAAGTCAAAAATGATTAAATGAAAACCTCACTCTAT
TTTCTGAGTTGAAATCAATGATTTTAGTACAATATTATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038014-exon-sc0001757-1575043694:32721..32899 | TCONS_00038014-exon-sc0001757-1575043694:32721..32899 | Clytia hemisphaerica | exon |
| TCONS_00038014-exon-sc0001757-1575043694:31311..32203 | TCONS_00038014-exon-sc0001757-1575043694:31311..32203 | Clytia hemisphaerica | exon |
| TCONS_00038014-exon-sc0001757-1510915933:32721..32899 | TCONS_00038014-exon-sc0001757-1510915933:32721..32899 | Clytia hemisphaerica | exon |
| TCONS_00038014-exon-sc0001757-1510915933:31311..32203 | TCONS_00038014-exon-sc0001757-1510915933:31311..32203 | Clytia hemisphaerica | exon |
| TCONS_00038014-exon-sc0001757-1491911889:32721..32899 | TCONS_00038014-exon-sc0001757-1491911889:32721..32899 | Clytia hemisphaerica | exon |
| TCONS_00038014-exon-sc0001757-1491911889:31311..32203 | TCONS_00038014-exon-sc0001757-1491911889:31311..32203 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001757 | supercontig | sc0001757:31311..32899 - |
Blast
The following BLAST results are available for this feature:
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