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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037937 ID=TCONS_00037937|Name=TCONS_00037937|organism=Clytia hemisphaerica|type=transcript|length=366bp
ACAAAAACTCAAccagaaacttcaaaaattgtgaggcGAGAGAGAAAAGA
CAAAATGGAGCATATCGACGTACCATTCCTAAAATCGGAATTTGCAAAAC
TTTCAGACAGCAAACTTGAGGCTTCTTCAGAAGGAAGAACAGTAAAACTC
AAAGATAAGCATCGGATATGGCCTTGGAACGTTCACTGTGGGGTTTGCCA
TATAAAACTGATGGTGAGGCTTGATGCGAAGTCACAAGGGCGCATTGAAT
ATTTCAGGAAGAAGCACTATGACGCATGCTTAGataagaaaacgaaaaaa
aggACGGCCAAAGAGACTCAACGAACGATAATCCAGGCATTCTCGAAACA
ACCACCTGCAAAAAAG Run BLAST on NCBI protein sequence of TCONS_00037937-protein >TCONS_00037937-protein ID=TCONS_00037937-protein|Name=TCONS_00037937-protein|organism=Clytia hemisphaerica|type=polypeptide|length=122bp
TKTQPETSKIVRRERKDKMEHIDVPFLKSEFAKLSDSKLEASSEGRTVKL
KDKHRIWPWNVHCGVCHIKLMVRLDAKSQGRIEYFRKKHYDACLDKKTKK
RTAKETQRTIIQAFSKQPPAKK Run BLAST on NCBI transcript from alignment at sc0001739:17525..18517- Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037937 ID=TCONS_00037937|Name=TCONS_00037937|organism=Clytia hemisphaerica|type=transcript|length=993bp|location=Sequence derived from alignment at sc0001739:17525..18517- (Clytia hemisphaerica)
ACAAAAACTCAACCAGAAACTTCAAAAATTGTGAGGCGAGAGAGAAAAGA
CAAAATGGAGCATATCGACGTACCATTCCTAAAATCGGGTACGTATTTAA
ATTGAACACGCGTTACCTTTCTTCAAGTTGAAATTTTAGTGATGAAGAAA
TACTTCCCGTTTCCAAAAATTATTGAAATACATGATAAAAGTGAGGCTTG
TGATATACTGTAACAAAATTTTAAGAAACATTTTAAAAATTGACGCTTCA
TCTATTTTGACTTTCAGAATTTGCAAAACTTTCAGACAGCAAACTTGAGG
CTTCTTCAGAAGGAAGAACAGTAAAACTCAAAGATAAGCATCGGATATGG
CCTTGGAACGTTCACTGTGGGGTTTGCCATATAAAACTGATGGTGAGGCT
TGATGCGAAGTCACAAGGGCGCATTGAATATTTCAGGAAGAGTAAGTGTA
ATTTCGATTAAATGAAAATACCCACCCGTGTCTACATTTTCTATAAGCAT
TTCTTGCCTCAAATTTGAATTGGGATTTGACGGATTTTTCAGAATTTCCC
AATAATTTAACTTAGGATATAAGCATCCTGTAACCATTTTTCAGTCTAAA
CTTAGCATCTCCGAGTCTGTTTTTTGAATTTTTGTATGCTTATATGTTTG
TTACCCCTGTAACACTTCAACACTTCAGTTGGAGTGATGATAATCTTAAC
TGAGATTTTGCGTATGTCCTTCTCTAAGATTGATCGTGTTACGCTGTGAA
TTTTAACATATTTGGTATTTTGATATATCTTTTATTGTTCAGGTGCTTTT
CATTCAAATGTGCCGGCTGTCAGTTTTTCAAACATATTTTAAATAGCAAT
ACCATATATATTAATTTTGAACTATGTCTATTATTACAGAGCACTATGAC
GCATGCTTAGATAAGAAAACGAAAAAAAGGACGGCCAAAGAGACTCAACG
AACGATAATCCAGGCATTCTCGAAACAACCACCTGCAAAAAAG Coding sequence (CDS) from alignment at sc0001739:17525..18517- >TCONS_00037937 ID=TCONS_00037937|Name=TCONS_00037937|organism=Clytia hemisphaerica|type=CDS|length=1098bp|location=Sequence derived from alignment at sc0001739:17525..18517- (Clytia hemisphaerica)
AGCACTATGACGCATGCTTAGATAAGAAAACGAAAAAAAGGACGGCCAAA
GAGACTCAACGAACGATAATCCAGGCATTCTCGAAACAACCACCTGCAAA
AAAGAATTTGCAAAACTTTCAGACAGCAAACTTGAGGCTTCTTCAGAAGG
AAGAACAGTAAAACTCAAAGATAAGCATCGGATATGGCCTTGGAACGTTC
ACTGTGGGGTTTGCCATATAAAACTGATGGTGAGGCTTGATGCGAAGTCA
CAAGGGCGCATTGAATATTTCAGGAAGAACAAAAACTCAACCAGAAACTT
CAAAAATTGTGAGGCGAGAGAGAAAAGACAAAATGGAGCATATCGACGTA
CCATTCCTAAAATCGGAGCACTATGACGCATGCTTAGATAAGAAAACGAA
AAAAAGGACGGCCAAAGAGACTCAACGAACGATAATCCAGGCATTCTCGA
AACAACCACCTGCAAAAAAGAATTTGCAAAACTTTCAGACAGCAAACTTG
AGGCTTCTTCAGAAGGAAGAACAGTAAAACTCAAAGATAAGCATCGGATA
TGGCCTTGGAACGTTCACTGTGGGGTTTGCCATATAAAACTGATGGTGAG
GCTTGATGCGAAGTCACAAGGGCGCATTGAATATTTCAGGAAGAACAAAA
ACTCAACCAGAAACTTCAAAAATTGTGAGGCGAGAGAGAAAAGACAAAAT
GGAGCATATCGACGTACCATTCCTAAAATCGGAGCACTATGACGCATGCT
TAGATAAGAAAACGAAAAAAAGGACGGCCAAAGAGACTCAACGAACGATA
ATCCAGGCATTCTCGAAACAACCACCTGCAAAAAAGAATTTGCAAAACTT
TCAGACAGCAAACTTGAGGCTTCTTCAGAAGGAAGAACAGTAAAACTCAA
AGATAAGCATCGGATATGGCCTTGGAACGTTCACTGTGGGGTTTGCCATA
TAAAACTGATGGTGAGGCTTGATGCGAAGTCACAAGGGCGCATTGAATAT
TTCAGGAAGAACAAAAACTCAACCAGAAACTTCAAAAATTGTGAGGCGAG
AGAGAAAAGACAAAATGGAGCATATCGACGTACCATTCCTAAAATCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037937-exon-sc0001739-1575043694:18430..18517 | TCONS_00037937-exon-sc0001739-1575043694:18430..18517 | Clytia hemisphaerica | exon |
| TCONS_00037937-exon-sc0001739-1575043694:18077..18250 | TCONS_00037937-exon-sc0001739-1575043694:18077..18250 | Clytia hemisphaerica | exon |
| TCONS_00037937-exon-sc0001739-1575043694:17525..17628 | TCONS_00037937-exon-sc0001739-1575043694:17525..17628 | Clytia hemisphaerica | exon |
| TCONS_00037937-exon-sc0001739-1510915933:18430..18517 | TCONS_00037937-exon-sc0001739-1510915933:18430..18517 | Clytia hemisphaerica | exon |
| TCONS_00037937-exon-sc0001739-1510915933:18077..18250 | TCONS_00037937-exon-sc0001739-1510915933:18077..18250 | Clytia hemisphaerica | exon |
| TCONS_00037937-exon-sc0001739-1510915933:17525..17628 | TCONS_00037937-exon-sc0001739-1510915933:17525..17628 | Clytia hemisphaerica | exon |
| TCONS_00037937-exon-sc0001739-1491911889:18430..18517 | TCONS_00037937-exon-sc0001739-1491911889:18430..18517 | Clytia hemisphaerica | exon |
| TCONS_00037937-exon-sc0001739-1491911889:18077..18250 | TCONS_00037937-exon-sc0001739-1491911889:18077..18250 | Clytia hemisphaerica | exon |
| TCONS_00037937-exon-sc0001739-1491911889:17525..17628 | TCONS_00037937-exon-sc0001739-1491911889:17525..17628 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001739 | supercontig | sc0001739:17525..18517 - |
Blast
The following BLAST results are available for this feature:
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