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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037714 ID=TCONS_00037714|Name=TCONS_00037714|organism=Clytia hemisphaerica|type=transcript|length=1575bp
GCAtatttttgtattgttttttttttcaatcaaaatagcTTTCCCTAGAT
ATTTCAAACttgataaatgataaaaataacactcgagaaaaaaaaatggc
CCTTGATGTCGAAATGTTCAAATAAGAGTTGAAAGATTAATATATGATCT
ATATAAAATCTTTAGAACCCTCGGTAGAAGCTCGAAACGCAGAAAAACCA
TGAAAACATTCctcatgaaaatttcgaaaaaagaataaagTACTACTTCG
GGCTACTTCCATTTGTCAAAAGACTTACAAAGATTATAGACATGGTCTTT
TACAACAGAATATTATCATATCATAAAGatatcccagctgacacacaacg
ttgtttcaaccttcatctaacgttatatgtaCGTTGTGAGCGtcaaataa
acgttgaaacaacgttgtgtgccagctgggatgttGGCAGCTTAAAGATA
TCACAAGAAACCAAATGTAGAACTACCCCCAAATCTAAAATTCCcccgaa
aaaattaaaaaaattcaaactttgaatttccccaaaaaaatcTCTAACAA
ATCTTGTATACAGGAAAACATTCGATTCTTCGCCTAATCAGATATAAGAA
ATAGTACGACCATCTTGAAAATCTTCTTACGATCAACATCGGTATATGTC
TCTTCAAAATGTCGGACTTTCTTTTCATTTATGAAGCCCAATCGCATCAA
ATCTGGTACACTTTCCTGGACAAATGCTTCCGAGAAGTCTGGATGGCCTT
GGATTGAGACTATATTTGAACTCCATCTAACTAGTTCGTATTTGCATGTT
TTAGATGAACCAAGCACCTCAAAATCTTCTCGACTTAGATCTTGTATTTC
CTCCCCATGAGCCTCAAATATAAGAAAGCTATCTTGATCACCAAAACAGT
TTTTGTAAGCCTTCATATCTTGGCATTCCTTTGTGACATTCACCATCTCA
CCTCCAAATATATGACCATCATAATCACAATTTCCTATGGTACACCCAAA
AGCTTTCCCAATCAGTTGATGGCCAAAACagattccaaaaattttccctt
ttccagATTCAAACACTTTTCGGACGAATTTCTTCAACTCGCTTATCCAA
ACCGTATCCTTGTTCACACTGTGACTTGAACCAGTGATCACAAATCCTGC
ATAATCTTCTAAGGGAATTTGTCCAAGGATAGACGGATTTTCAGTAACAA
ATAATGGCTCATACAGTACCTCCATTTGACTAATATATTTGAATTCATTG
AATCTTGGTTGGAAATGTTTTTGCCACCATTCTTTGCTACCACCAATAAC
AGGGTTTTCTTCCACGATAATTACACCAATCTTTTTAATGTTCATCGTCT
CAGTAGTAATAGTTATTCTTCCGACTACGTATTTCTTGTTTTGCAGAGGA
TAAAGTAAAGAACTAACTAGCCAACTTGTTCgcaattttgttttgacttc
tttaaagaatattttcaattttttcttgtatttatATTCTGTGTTTGTGG
ATTCTTAAGACTATCCAAGCAACCTGCAAAACTGCTTTGtcgaatttaaa
tttttattttctcgtATTTGCTGGC Run BLAST on NCBI protein sequence of TCONS_00037714-protein >TCONS_00037714-protein ID=TCONS_00037714-protein|Name=TCONS_00037714-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MNIKKIGVIIVEENPVIGGSKEWWQKHFQPRFNEFKYISQMEVLYEPLFV
TENPSILGQIPLEDYAGFVITGSSHSVNKDTVWISELKKFVRKVFESGKG
KIFGICFGHQLIGKAFGCTIGNCDYDGHIFGGEMVNVTKECQDMKAYKNC
FGDQDSFLIFEAHGEEIQDLSREDFEVLGSSKTCKYELVRWSSNIVSIQG
HPDFSEAFVQESVPDLMRLGFINEKKVRHFEETYTDVDRKKIFKMVVLFL
ISD Run BLAST on NCBI transcript from alignment at sc0001693:30053..31627 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037714 ID=TCONS_00037714|Name=TCONS_00037714|organism=Clytia hemisphaerica|type=transcript|length=1575bp|location=Sequence derived from alignment at sc0001693:30053..31627 (Clytia hemisphaerica)
GCCAGCAAATacgagaaaataaaaatttaaattcgaCAAAGCAGTTTTGC
AGGTTGCTTGGATAGTCTTAAGAATCCACAAACACAGAATataaatacaa
gaaaaaattgaaaatattctttaaagaagtcaaaacaaaattgcGAACAA
GTTGGCTAGTTAGTTCTTTACTTTATCCTCTGCAAAACAAGAAATACGTA
GTCGGAAGAATAACTATTACTACTGAGACGATGAACATTAAAAAGATTGG
TGTAATTATCGTGGAAGAAAACCCTGTTATTGGTGGTAGCAAAGAATGGT
GGCAAAAACATTTCCAACCAAGATTCAATGAATTCAAATATATTAGTCAA
ATGGAGGTACTGTATGAGCCATTATTTGTTACTGAAAATCCGTCTATCCT
TGGACAAATTCCCTTAGAAGATTATGCAGGATTTGTGATCACTGGTTCAA
GTCACAGTGTGAACAAGGATACGGTTTGGATAAGCGAGTTGAAGAAATTC
GTCCGAAAAGTGTTTGAATctggaaaagggaaaatttttggaatctGTTT
TGGCCATCAACTGATTGGGAAAGCTTTTGGGTGTACCATAGGAAATTGTG
ATTATGATGGTCATATATTTGGAGGTGAGATGGTGAATGTCACAAAGGAA
TGCCAAGATATGAAGGCTTACAAAAACTGTTTTGGTGATCAAGATAGCTT
TCTTATATTTGAGGCTCATGGGGAGGAAATACAAGATCTAAGTCGAGAAG
ATTTTGAGGTGCTTGGTTCATCTAAAACATGCAAATACGAACTAGTTAGA
TGGAGTTCAAATATAGTCTCAATCCAAGGCCATCCAGACTTCTCGGAAGC
ATTTGTCCAGGAAAGTGTACCAGATTTGATGCGATTGGGCTTCATAAATG
AAAAGAAAGTCCGACATTTTGAAGAGACATATACCGATGTTGATCGTAAG
AAGATTTTCAAGATGGTCGTACTATTTCTTATATCTGATTAGGCGAAGAA
TCGAATGTTTTCCTGTATACAAGATTTGTTAGAgatttttttggggaaat
tcaaagtttgaatttttttaattttttcgggGGAATTTTAGATTTGGGGG
TAGTTCTACATTTGGTTTCTTGTGATATCTTTAAGCTGCCaacatcccag
ctggcacacaacgttgtttcaacgtttatttgaCGCTCACAACGtacata
taacgttagatgaaggttgaaacaacgttgtgtgtcagctgggatatCTT
TATGATATGATAATATTCTGTTGTAAAAGACCATGTCTATAATCTTTGTA
AGTCTTTTGACAAATGGAAGTAGCCCGAAGTAGTActttattcttttttc
gaaattttcatgagGAATGTTTTCATGGTTTTTCTGCGTTTCGAGCTTCT
ACCGAGGGTTCTAAAGATTTTATATAGATCATATATTAATCTTTCAACTC
TTATTTGAACATTTCGACATCAAGGgccatttttttttctcgagtgttat
ttttatcatttatcaaGTTTGAAATATCTAGGGAAAgctattttgattga
aaaaaaaaacaatacaaaaataTGC Coding sequence (CDS) from alignment at sc0001693:30053..31627 >TCONS_00037714 ID=TCONS_00037714|Name=TCONS_00037714|organism=Clytia hemisphaerica|type=CDS|length=762bp|location=Sequence derived from alignment at sc0001693:30053..31627 (Clytia hemisphaerica)
ATGAACATTAAAAAGATTGGTGTAATTATCGTGGAAGAAAACCCTGTTAT
TGGTGGTAGCAAAGAATGGTGGCAAAAACATTTCCAACCAAGATTCAATG
AATTCAAATATATTAGTCAAATGGAGGTACTGTATGAGCCATTATTTGTT
ACTGAAAATCCGTCTATCCTTGGACAAATTCCCTTAGAAGATTATGCAGG
ATTTGTGATCACTGGTTCAAGTCACAGTGTGAACAAGGATACGGTTTGGA
TAAGCGAGTTGAAGAAATTCGTCCGAAAAGTGTTTGAATctggaaaaggg
aaaatttttggaatctGTTTTGGCCATCAACTGATTGGGAAAGCTTTTGG
GTGTACCATAGGAAATTGTGATTATGATGGTCATATATTTGGAGGTGAGA
TGGTGAATGTCACAAAGGAATGCCAAGATATGAAGGCTTACAAAAACTGT
TTTGGTGATCAAGATAGCTTTCTTATATTTGAGGCTCATGGGGAGGAAAT
ACAAGATCTAAGTCGAGAAGATTTTGAGGTGCTTGGTTCATCTAAAACAT
GCAAATACGAACTAGTTAGATGGAGTTCAAATATAGTCTCAATCCAAGGC
CATCCAGACTTCTCGGAAGCATTTGTCCAGGAAAGTGTACCAGATTTGAT
GCGATTGGGCTTCATAAATGAAAAGAAAGTCCGACATTTTGAAGAGACAT
ATACCGATGTTGATCGTAAGAAGATTTTCAAGATGGTCGTACTATTTCTT
ATATCTGATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037714-exon-sc0001693-1491911889:30053..31627 | TCONS_00037714-exon-sc0001693-1491911889:30053..31627 | Clytia hemisphaerica | exon |
| TCONS_00037714-exon-sc0001693-1510915933:30053..31627 | TCONS_00037714-exon-sc0001693-1510915933:30053..31627 | Clytia hemisphaerica | exon |
| TCONS_00037714-exon-sc0001693-1575043694:30053..31627 | TCONS_00037714-exon-sc0001693-1575043694:30053..31627 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001693 | supercontig | sc0001693:30053..31627 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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