TCONS_00037661 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037661
Unique NameTCONS_00037661
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2600

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037661 ID=TCONS_00037661|Name=TCONS_00037661|organism=Clytia hemisphaerica|type=transcript|length=2600bp
ttgaataagACTGGGCAATCTGTATCTGCTATTTACGAAGAGTGGAGAAA
ATACAAAATCAGAGTTCCTGTGTTTGGTGCAATCCTCATTGATGATACTT
TAGAGCAGattttgttgGTTCAAGGTTTCCACAACAAAGCAAGTTGGGGA
TTTCCCAAaggaaaagtaaacaaagatgaAGAAGGCTTGACTTGTGCTAT
CAGAGAGGTTTGGGAAGAAGTTGGTTTCGATATTTCAAAGTTAGCAAAAG
AAAGTGATTTTATCGAGAACAATTTTCATGACCATCAGATTCGGTTATAC
ATAGTACCAGGAGTTGACAAGACGTTCGATTTCAAACCAAACACTCGAGG
TGAAATCAAAACCACTTCGAAAATGGATCCAGGACAAAAAAGAGGCCATG
TCTAGTCAAAAACATTCCATACTGGAAGATTACTTCTCCGGCAGCACTTC
CCAGAAATCGAATTTTCTATCAAGCGCAAGTCCACAGTCTGAAGAACGCC
GTGAACATTTGAAGAAGAAACGAAAGAAGGAGCAGGAAGAACAGTATAAG
CAGTTGCACATCTTGATGAATCCACTTAACCCGTTGAGAAACCACGTGGC
TAATGAGAATGCGTTAAAATCAATACTCGGCGTACAAACTTCTCAACCAC
AACCGGAACAACCGGAAGTTATCCGGAAACTCTTAACGGGGAATGTGCCA
CAATCCCCTCCAACCAATTCGTTCAAACGCTCACAAAAAGATCATTCCAA
AGATTCGAAAAGACGGCCAAACTTGACTTCTTTGTTCAGTACAGAAAACG
ATGAAAAATCATCGAAGGGTGGCGTTGATTTACTTGGACACTCCCTCTAC
AGCCCTTTTGCAATGACCAGCCTTCTACCAAAAGACCAAGCTTCACCATT
GAAATGGAATACGAACGTCTCTTCCCAAACAATCTCGGGAAAGAAACTTG
GTAATACTAAGAGAAAGAAGAAATTAGTTTACGCAGATTTTGACTTTTCT
TCACCCGCTTTCACAAATTTCCGTTTCGATTATCAGTCTATTTTAAATGA
GCTATGATGGAGAAGATAGTTTCTAGTCTAAgtcttttgtaaatatttta
tacatttttgaacCTTTTAGCAAACTTTTATGctatattttctaatttta
gcATATTTACAGTAACTCTTATTTGTCCtatattttttatctaaataTTG
TCGTATTTTACGTACTAATTGACAacataatacaccttttcgaccggaCC
TTTTCGACTTTTCGCCAATTGacgtgcgggcattttttgtccgttttacc
atcctaaaaccgtcccagtctttttttcgaacaaagtgtaaaaaaagatt
ggatcgagtttagggtgttGATTAAATATTAAAGTGGCACTCGCCTGACt
tgcgactacggtcgaaaaggtgtattggtaAGGAGACATTTAAAACACTT
CTCGACCATTTTTTTACGATcttgaaagaaattttaagcCTCTTTCGACT
GCGATTTCTTCTGTTTTCACTACCTCGttttatttttgaagttctcCTTT
TTGTTGACCATCCACAAGCTTTAATAGTAAGTTTTAGAAACAGTATAGTA
TTTTATTCAGACACTaatttgtatttgtttttattttcactttttattaa
agtctgttccaaaaagATTGGCAGTCCGCACATTTTGATATATTGCTCTT
GTATTAAAAAGATATaattaaaagtaatacctcATTGAAAGGATAATCCT
GAGCGGTTTTTCTCAAAATGTGCGGACTGCTAATTTTATAGAACAGACTT
TCAATTGATTTTACTTTAAAGCGTGTCCGGAAAAAAATACAGAACAAAAT
CTGTCAAAGTATTTTGTTTTGCTGGCTTAAACTAATCACTGAACATAAAT
CGTTTTAAAGTTagcattttcaagattttcgatttcTCAGCCCCCAAAAA
ACCAACGCAATGATTTTTAGTCAAAAGACGACCAAGCTTTCAGGTTatta
aatcaaaatcaatatcaAAACGATAAATGCATTAAAAATTCTGGTACCTA
TAAGCTCtatatttttctctttactTTTACGGGGTCGACAAAGCAAACTT
ATTATTTACAATACCTATTTTGGGTGAATCGCGCCTCGTATATGTATTTA
TTTGTTAATTAAAGAGTAAAGGCCGGTCTTCACTTGCGCCCGCTGCAATC
GCTCTTTTTGGCTTtaaccatggcgttctaaatctatttacgtcataaaa
atgtagcgcgcgcttgaaaaaaaagttaaacacatttcaactttttttca
accgttgcgtcagatcgcgccattggaattgcttcatttttcttttgacc
aatagcgcggtagctttgctcgaaaaagtgcgctTGCAGGCCGcgtgcaa
gtggagaccggccttaacccCTTTACAATTATTTCATGTCATCGGATTTT
ACGTGGATgtctccaaaattttcatttttgtttttattgtaggAATATTA
TATTTTAACGTAGAATATGAATAAAATATAAGGGTATCACACATAGACAT
AGTGTTTCGAATTTCTATTTGCCTCGTTATAATATTCTATCAGTTACAAA
Run BLAST on NCBI

protein sequence of TCONS_00037661-protein

>TCONS_00037661-protein ID=TCONS_00037661-protein|Name=TCONS_00037661-protein|organism=Clytia hemisphaerica|type=polypeptide|length=219bp
MSSQKHSILEDYFSGSTSQKSNFLSSASPQSEERREHLKKKRKKEQEEQY
KQLHILMNPLNPLRNHVANENALKSILGVQTSQPQPEQPEVIRKLLTGNV
PQSPPTNSFKRSQKDHSKDSKRRPNLTSLFSTENDEKSSKGGVDLLGHSL
YSPFAMTSLLPKDQASPLKWNTNVSSQTISGKKLGNTKRKKKLVYADFDF
SSPAFTNFRFDYQSILNEL
Run BLAST on NCBI

transcript from alignment at sc0001680:6228..15959-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037661 ID=TCONS_00037661|Name=TCONS_00037661|organism=Clytia hemisphaerica|type=transcript|length=9732bp|location=Sequence derived from alignment at sc0001680:6228..15959- (Clytia hemisphaerica)
TTGAATAAGACTGGGCAATCTGTATCTGCTATTTACGAAGAGTGGAGAAA
ATACAAAATCAGAGTTCCTGTGTTTGGTGCAATCCTCATTGATGATACTT
TAGAGCAGGTATTCTAACATATTTTCAATTTTATTTATCCAAGAGGTGTT
TTTTTATTTTATTGAACATGATTTGGACAACAATTTTTCAATTTTTTTTT
CTCAAAATATATTTCGAGACCATCCCTAAGAATCTTTAATTTTTTAAATA
TCTAAAAACAAAATATTAAAACAGTTTAATCCTTTCCGTGCCACCATAAT
TGCAAAAAAGTTTTCATCTTTTTAAAATTATGAGTTGTTAGTTGCCAGGC
AGAATGCTAAATATACCCGACAATCGTTTCTAAATTTAAATTTAAAAAGT
TTAAAGTACAATAGTGTGGCTTGTCTGTTTTTGAACTTTGGCATTGGACA
TTGACATGAAAAGTAACGAGTTCTTTGAAAATTTATTCCAATCACTGATT
TTTTACAAAACATGAAGTTGCCAGTATTGAAAGAATAATTTTCATATGCT
CTCAAAATCAATCTAACACAGTACATTTGTATTTACACTGCTATCTCAAT
AGGCCTCAAAATAGGTGAAAATGTAAAATTTAAATAATTAGATGTTAAAT
AAATTAAGTAATAAGTAATTCCTTTTTCAGATTTTGTTGGTTCAAGGTTT
CCACAACAAAGCAAGTTGGGGATTTCCCAAAGGAAAAGTAAACAAAGATG
AAGAAGGCTTGACTTGTGCTATCAGAGAGGTACAGTTTTTTGAAATCTGT
TCATCAAGAACGCATACATAACTAGAATTCGTCGTAGAATTCGCATTTGG
AAACTGGAACTCTTACTTTATAAAAATAAGGACCTATTGCCCAATTTAAA
GGAATTTTAAATTTGTTCTGTATCTTCTTAGATTTATTTGAAATGTTTAT
TTTGTGGCACATAATTATTTAAATGGAAAATCCTTTTTTCCTCTACCAAT
TTGTAAAACATGTTTTTATACTTATATCAACCATTGACTTTAAAGCCCGA
AGGTCTAGAGTGGAGTAGAATCTCTAACCTTTCCCAGGCAAGAAAAAGTG
AAGCCACTTATTTTCCATCCAAAATAGGGATAGATTTTAGTTTCAATTCG
GCGTTTGTGTAAAAACCACGTGCAGGTGTTCTGGATGGGAAATAAGTGGT
TTCATTTCCCATCCAGGAGTCTCGAGTCTCGAGTCTAGCTCTTCAGTTGG
AAGTCAATGACTAATACCAAGTTTTGCTTTTAACATGTCCCCAATTAAAA
TTCATTGCTAAAATATATCGTCAGAATCTTACATGAAAACAATATGAATT
CACTTGTCTTCACCCAAAAATGATGCTATTTTTTCAGCGAATAGAAAATA
CAGCATATTAAGATTGTTTCCTTAAGATAAAAACAGGACTGCAAAGTTTT
CAAAATATAGCGTAAGCAACTTTTATTTCTCAGATAAACCCGCTTGGTAA
CATAATTTGTAAAGGGAAGAATAGCTGGTTGCTCTTCTGTCTTTCTGTCA
GAGATTTTTCTAACCTTATGCCTTTTAGGTTTGGGAAGAAGTTGGTTTCG
ATATTTCAAAGTTAGCAAAAGAAAGTGATTTTATCGAGAACAATTTTCAT
GACCATCAGGTGAGAAGATATAACTTTCTTTTTTTCGTGAATCTTTTTTA
CAACACGTTTTTAATGAGAACAAACTATAGAAGAACATAAAGCTTCGCTG
GTCCAATTATTAAGAACAAGTGAAGAATATTTGAAGGTTTTGCCGACTCT
AAGACATGGGATTTCTTAAGAAATTATAAAAACACCATAAAATGATGAAA
ATAAAGCCGATGTTTTAAAAACATTCTTAGGGTTAATCTCAAAAGTTAAG
TTAACATCTCAAGGCTTTAAAATTTTGGACTTTCTTATAAAGAAAAAACG
TGTATTCAATTCAAAGACATAAATTGGTTTGAATCTTAACCCTTCAAGTA
TCTTGGGAGAGGGTAAAGAGCCCCCTCAAAACGAAATTTGGATTTATTGA
TGACGCCATCTCCACCTGATGACCTCACCATTATTTGAAAATATCCCCTC
TACCTAAATACTGTATCGAGTGATTGGAAAATACTATTGACTTAAAATTT
TGACAAGTTTTAGGTTTTGATAATACAAGCTTTTAACCAAATTTAAACTA
AATCATACCAGGGGTTATGTCAAAAGTGAGCATTTTAGGTAAAATACGGA
CCGGTCTGTAAAATACCAACCAGTGGCCATGTGACTAAATTGAAATTTAG
TTTTGATTTCTGTTTGCAGATTCGGTTATACATAGTACCAGGAGTTGACA
AGACGTTCGATTTCAAACCAAACACTCGAGGTGAAATCAAAGTAAGACAC
CTCATCCATCCATTCATTCATTTATCTTTTTTTACAAAATGTCAGTGTTT
TTAAGACCAACTTTGTCATTGAACAATATTTTTTGATACTTTAATGGGAT
TAAATTTTGCAGGGGTTAAGTTTCACGGTTCAGCTCATCCATGAAATTTT
AATATTTTGTGGGGACTGAATTTCGAAGATGGCTTCATTGGGTGACAATA
TTTTCATGATTTTGTGCCTTTTACCGTCAAATCATGAATGTTGGTTGTTG
AAATACGCATTCTTAGCGCCACTTCGATGCCAGTAAATATTCAAAAAGTT
TTTATTTGACATTTTTCGTGTTTTGTTTAGAAATATTTTGCGGATAAGGA
CTTTCTAAATTCCCATTGGGGCTTAATTTCCCGGATGACACCCGAATCCG
CGAAAATCCACGAAATTTAATCCCCCCGAATATTTATCCCATTAAAGTAT
CCTGTCTAATACACCTATCAACCCTTGTTTTAAAGGTAGCCTACGAATGT
CGTGCTCCGAGAAAGATTTCTCCTTGTATATCCATTTCCAGTCCCTTTAA
AGCCGACTGCGCTGCGGTATATCAGTATGAGCAAACTTCCAAGCTTTAGT
AGTTGCTTGGTTACTAGGGAGCCAACTTTCAAGCTTTTGTAGTTGCTTGG
TTACTAGGGTTTTCAAGAAGTGAGAAAAGAAGAAAATGGTCATTTTTCTC
CCTCCCAAAAATTCCCAAAGTTAACCAAATTTATTACACCCATTCTTTCA
GCAGTATTTTAGCAAAAAAACAATCAGTTCCTTTTCTTTCAATAAAACGG
TTGAAAGGTATTATGCATTGGAAGGTTTCAAAGCTTGTTATTTATGATAT
GCACCATTGCAATGTCTTCTGACATTACATCATGGACCCAACAGCTGATT
GGTTGTAAGTGACGTAAAATCAATCAATACGTCACTTTCAACCAATCAGC
TGTTGGGTCCGTGGAAGACATTGNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TTTTATTTCCATCGAAAAATGAAACGGATCTCAGCTTCTCAAAATATGCC
AGACAGTGTTGACTGTGCTACGACTTTGGAATGATTGCTGAATTTGTGGG
GATTGTTGATTTTTTTTTTTTGCCCTCATAAGAAACGTTCTTCCCCATCG
TTACTTTAGAGTTCGGTTTTTGCTAAACTGAAAAAAGAAACAAAGAGCAA
TTTTAGCTACTATTTTTTCAAACACCCTGAAGAATGATCCTTAATCGAAA
TTTCATTCCAAAAAGAGCAAATTGTTAACTCCTTTTCAAATCTTTTTACG
ATTCATCTTAGACCACTTCGAAAATGGATCCAGGACAAAAAAGAGGCCAT
GTCTAGTCAAAAACATTCCATACTGGAAGATTACTTCTCCGGCAGCACTT
CCCAGAAATCGAATTTTCTATCAAGCGCAAGTCCACAGTCTGAAGAACGC
CGTGAACATTTGAAGAAGAAACGAAAGAAGGAGCAGGAAGAACAGTATAA
GCAGTTGCACATCTTGATGAATCCACTTAACCCGTTGAGAAACCACGTGG
CTAATGAGAATGCGTTAAAATCAATACTCGGCGTACAAAGTTAGTGGATT
TTTTATCATTCTTCGCAACGGAAGTAGCCTAGTTAGCTAAGCCCGTATTC
ACAAGACTCAGATGCACGGCATACGGCAATGTAGCGTTTTCTGCGCTTTA
ACGATTTTTTACACAGGAAAAAATTAGCAGATCACCCGGATGGGAAAAGT
ATTTTTGACCATTTTTTCTCAATTTAAAAGGCATGATATCCAAAACTTCA
CAAAATTCAATGATTTTCAATGGAATTTTCAACAGTTTAATACTGAAAGA
AGACATTTTAATGTAAATTTTAGCTAATACTTACTGTTTTGAAGCCTGAA
TAGCGATTTTTAAAAGTTTTGGCAATATTTACGTAAGCCCAAAATTAGGC
TGTGGCCGAATAAGGGCCGGCGTAAAAGGGGCCGGAGTAAAAAGGACCGG
TAAGAAGGTACATAATTTTTCCCATGACTTATTTACGGATTTTGAAGTTT
GCCTTGGAATACTTTTTCAGTCACGACTTACCATCAGATTTATCCCAGCG
ACTGAATCAAGGTGATTTCGATGAGAAAACAAACACTACGGTTTAACTTA
CTAAAAAAAATTTTTATTGGACAGACACAATTGATCTTTATTTATGATAT
GCACCATTGCAATGTCTTCTGACATTACATCACGGACCCAGCAGCTGATT
GGTTGTAAGTGACGTAAAATCAGTCAATACGTCACTTGCAACCAATCAGC
TGTCGGGTCCGTCGAAGACATTGCAATGATGAAATGAAAAATAGGAACAT
ATTCTTTCCCACGTCATGACGCCAGTGGTTTAATTTACTAAAGAACAATA
GTGTGTGTTCAGTAAACAAATCTTTTTAGAGAGTTTAACCATAGTTAAGC
CTGATTTTTTACCTCGAATTTCCGTAACTCGAACGATTACTGATTATCCC
CTTGGTGTTCCAGCACTCGACTTAAAATACACTTCCCTACTTGCTCTAAC
TTTAATCATCAGGTAGGTCCAATAAGCGTTCCGGCTTGTTTCATTTATAC
GCTTCATTTTCTAACCATAGCTTCTCAACCACAACCGGAACAACCGGAAG
TTATCCGGAAACTCTTAACGGGGAATGTGCCACAATCCCCTCCAACCAAT
TCGTTCAAACGCTCACAAAAAGATCATTCCAAAGATTCGAAAAGACGGCC
AAACTTGACTTCTTTGTTCAGTACAGAAAACGATGAAAAATCATCGAAGG
GTGGCGTTGATTTACTTGGACACTCCCTCTACAGCCCTTTTGCAATGACC
AGCCTTCTACCAAAAGACCAAGCTTCACCATTGAAATGGAATACGAACGT
CTCTTCCCAAACAATCTCGGGAAAGAAACTTGGTAATACTAAGAGAAAGA
AGAAATTAGTTTACGCAGATTTTGACTTTTCTTCACCCGCTTTCACAAAT
TTCCGTTTCGATTATCAGTCTATTTTAAATGAGCTATGATGGAGAAGATA
GTTTCTAGTCTAAGTCTTTTGTAAATATTTTATACATTTTTGAACCTTTT
AGCAAACTTTTATGCTATATTTTCTAATTTTAGCATATTTACAGTAACTC
TTATTTGTCCTATATTTTTTATCTAAATATTGTCGTATTTTACGTACTAA
TTGACAACATAATACACCTTTTCGACCGGACCTTTTCGACTTTTCGCCAA
TTGACGTGCGGGCATTTTTTGTCCGTTTTACCATCCTAAAACCGTCCCAG
TCTTTTTTTCGAACAAAGTGTAAAAAAAGATTGGATCGAGTTTAGGGTGT
TGATTAAATATTAAAGTGGCACTCGCCTGACTTGCGACTACGGTCGAAAA
GGTGTATTGGTAAGGAGACATTTAAAACACTTCTCGACCATTTTTTTACG
ATCTTGAAAGAAATTTTAAGCCTCTTTCGACTGCGATTTCTTCTGTTTTC
ACTACCTCGTTTTATTTTTGAAGTTCTCCTTTTTGTTGACCATCCACAAG
CTTTAATAGTAAGTTTTAGAAACAGTATAGTATTTTATTCAGACACTAAT
TTGTATTTGTTTTTATTTTCACTTTTTATTAAAGTCTGTTCCAAAAAGAT
TGGCAGTCCGCACATTTTGATATATTGCTCTTGTATTAAAAAGATATAAT
TAAAAGTAATACCTCATTGAAAGGATAATCCTGAGCGGTTTTTCTCAAAA
TGTGCGGACTGCTAATTTTATAGAACAGACTTTCAATTGATTTTACTTTA
AAGCGTGTCCGGAAAAAAATACAGAACAAAATCTGTCAAAGTATTTTGTT
TTGCTGGCTTAAACTAATCACTGAACATAAATCGTTTTAAAGTTAGCATT
TTCAAGATTTTCGATTTCTCAGCCCCCAAAAAACCAACGCAATGATTTTT
AGTCAAAAGACGACCAAGCTTTCAGGTTATTAAATCAAAATCAATATCAA
AACGATAAATGCATTAAAAATTCTGGTACCTATAAGCTCTATATTTTTCT
CTTTACTTTTACGGGGTCGACAAAGCAAACTTATTATTTACAATACCTAT
TTTGGGTGAATCGCGCCTCGTATATGTATTTATTTGTTAATTAAAGAGTA
AAGGCCGGTCTTCACTTGCGCCCGCTGCAATCGCTCTTTTTGGCTTTAAC
CATGGCGTTCTAAATCTATTTACGTCATAAAAATGTAGCGCGCGCTTGAA
AAAAAAGTTAAACACATTTCAACTTTTTTTCAACCGTTGCGTCAGATCGC
GCCATTGGAATTGCTTCATTTTTCTTTTGACCAATAGCGCGGTAGCTTTG
CTCGAAAAAGTGCGCTTGCAGGCCGCGTGCAAGTGGAGACCGGCCTTAAC
CCCTTTACAATTATTTCATGTCATCGGATTTTACGTGGATGTCTCCAAAA
TTTTCATTTTTGTTTTTATTGTAGGAATATTATATTTTAACGTAGAATAT
GAATAAAATATAAGGGTATCACACATAGACATAGTGTTTCGAATTTCTAT
TTGCCTCGTTATAATATTCTATCAGTTACAAA

Coding sequence (CDS) from alignment at sc0001680:6228..15959-

>TCONS_00037661 ID=TCONS_00037661|Name=TCONS_00037661|organism=Clytia hemisphaerica|type=CDS|length=1320bp|location=Sequence derived from alignment at sc0001680:6228..15959- (Clytia hemisphaerica)
CTTCTCAACCACAACCGGAACAACCGGAAGTTATCCGGAAACTCTTAACG
GGGAATGTGCCACAATCCCCTCCAACCAATTCGTTCAAACGCTCACAAAA
AGATCATTCCAAAGATTCGAAAAGACGGCCAAACTTGACTTCTTTGTTCA
GTACAGAAAACGATGAAAAATCATCGAAGGGTGGCGTTGATTTACTTGGA
CACTCCCTCTACAGCCCTTTTGCAATGACCAGCCTTCTACCAAAAGACCA
AGCTTCACCATTGAAATGGAATACGAACGTCTCTTCCCAAACAATCTCGG
GAAAGAAACTTGGTAATACTAAGAGAAAGAAGAAATTAGTTTACGCAGAT
TTTGACTTTTCTTCACCCGCTTTCACAAATTTCCGTTTCGATTATCAGTC
TATTTTAAATGAGCTATGAATGTCTAGTCAAAAACATTCCATACTGGAAG
ATTACTTCTCCGGCAGCACTTCCCAGAAATCGAATTTTCTATCAAGCGCA
AGTCCACAGTCTGAAGAACGCCGTGAACATTTGAAGAAGAAACGAAAGAA
GGAGCAGGAAGAACAGTATAAGCAGTTGCACATCTTGATGAATCCACTTA
ACCCGTTGAGAAACCACGTGGCTAATGAGAATGCGTTAAAATCAATACTC
GGCGTACAAACTTCTCAACCACAACCGGAACAACCGGAAGTTATCCGGAA
ACTCTTAACGGGGAATGTGCCACAATCCCCTCCAACCAATTCGTTCAAAC
GCTCACAAAAAGATCATTCCAAAGATTCGAAAAGACGGCCAAACTTGACT
TCTTTGTTCAGTACAGAAAACGATGAAAAATCATCGAAGGGTGGCGTTGA
TTTACTTGGACACTCCCTCTACAGCCCTTTTGCAATGACCAGCCTTCTAC
CAAAAGACCAAGCTTCACCATTGAAATGGAATACGAACGTCTCTTCCCAA
ACAATCTCGGGAAAGAAACTTGGTAATACTAAGAGAAAGAAGAAATTAGT
TTACGCAGATTTTGACTTTTCTTCACCCGCTTTCACAAATTTCCGTTTCG
ATTATCAGTCTATTTTAAATGAGCTATGAATGTCTAGTCAAAAACATTCC
ATACTGGAAGATTACTTCTCCGGCAGCACTTCCCAGAAATCGAATTTTCT
ATCAAGCGCAAGTCCACAGTCTGAAGAACGCCGTGAACATTTGAAGAAGA
AACGAAAGAAGGAGCAGGAAGAACAGTATAAGCAGTTGCACATCTTGATG
AATCCACTTAACCCGTTGAGAAACCACGTGGCTAATGAGAATGCGTTAAA
ATCAATACTCGGCGTACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022408XLOC_022408Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037661-proteinTCONS_00037661-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037661-exon-sc0001680-1575043694:15852..15959TCONS_00037661-exon-sc0001680-1575043694:15852..15959Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1575043694:15181..15279TCONS_00037661-exon-sc0001680-1575043694:15181..15279Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1575043694:14301..14381TCONS_00037661-exon-sc0001680-1575043694:14301..14381Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1575043694:13569..13640TCONS_00037661-exon-sc0001680-1575043694:13569..13640Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1575043694:9221..9498TCONS_00037661-exon-sc0001680-1575043694:9221..9498Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1575043694:6228..8189TCONS_00037661-exon-sc0001680-1575043694:6228..8189Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1510915933:15852..15959TCONS_00037661-exon-sc0001680-1510915933:15852..15959Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1510915933:15181..15279TCONS_00037661-exon-sc0001680-1510915933:15181..15279Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1510915933:14301..14381TCONS_00037661-exon-sc0001680-1510915933:14301..14381Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1510915933:13569..13640TCONS_00037661-exon-sc0001680-1510915933:13569..13640Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1510915933:9221..9498TCONS_00037661-exon-sc0001680-1510915933:9221..9498Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1510915933:6228..8189TCONS_00037661-exon-sc0001680-1510915933:6228..8189Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1491911889:15852..15959TCONS_00037661-exon-sc0001680-1491911889:15852..15959Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1491911889:15181..15279TCONS_00037661-exon-sc0001680-1491911889:15181..15279Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1491911889:14301..14381TCONS_00037661-exon-sc0001680-1491911889:14301..14381Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1491911889:13569..13640TCONS_00037661-exon-sc0001680-1491911889:13569..13640Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1491911889:9221..9498TCONS_00037661-exon-sc0001680-1491911889:9221..9498Clytia hemisphaericaexon
TCONS_00037661-exon-sc0001680-1491911889:6228..8189TCONS_00037661-exon-sc0001680-1491911889:6228..8189Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001680supercontigsc0001680:6228..15959 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.13586	0.921716	1.02636	1.26049	24.5578	22.7735	15.7826	20.2049	14.0626	14.6689	13.57	11.0963	10.7951	10.9334	2.64042	2.49547	3.85128	3.85859	1.59513	1.83377	3.01363	3.16962	4.58474	5.20181	6.39219	15.0983	2.3143	1.92592	3.60694	4.66442
Blast
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BLAST of TCONS_00037661 vs. Swiss-Prot (Human)
Match: DCP2 (m7GpppN-mRNA hydrolase OS=Homo sapiens GN=DCP2 PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 2.931e-32
Identity = 60/117 (51.28%), Postives = 81/117 (69.23%), Query Frame = 1 
Query:   13 GQSVSAIYEEWRKYKIRVPVFGAILIDDTLEQILLVQGFHNKASWGFPKGKVNKDEEGLTCAIREVWEEVGFDISKLAKESDFIENNFHDHQIRLYIVPGVDKTFDFKPNTRGEIKT 363
            G+ V  + +EW++YK+ VP +GAI++D+TLE +LLVQG+  K+ WGFPKGKVNK+E    CA REV+EE GFDI     + D+IE   +D   RLYI+PG+ K   F P TR EI+ 
Sbjct:   80 GEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYLAKSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELRINDQLARLYIIPGIPKDTKFNPKTRREIRN 196
The following BLAST results are available for this feature:
BLAST of TCONS_00037661 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCP22.931e-3251.28m7GpppN-mRNA hydrolase OS=Homo sapiens GN=DCP2 PE=... [more]
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