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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037653 ID=TCONS_00037653|Name=TCONS_00037653|organism=Clytia hemisphaerica|type=transcript|length=1006bp
ATCATTTTAAAAATGGAGGAGAACGACCAAGACGAACTCTCTCCAGTCCA
TAACAATGAAATAGAAGATTCCATGGATGCCAGTATGGTTTTAAAACAGT
GGAGTGACGTTGCTCTTGAAGAATTAATCAACGCGTATGAGCCTCACACA
TGTCTTTGGATAACTACCAGCGATGAATACAAGGATCCAGATAAAAAAGA
AACTGCACTTCAGGAAGTCGATCGTACCATGCAACAATTTCATTTCTCTA
GACAAGAATATACTAAAAAATGGACAATCCTAAGAGGTCAGTTTTTAAGA
GAAGTTCGACGCGAGAGATCATCTAACCATGTTCCCGGCTGGCGTTGGTA
TCCCAAACTAGAATTCTTAAAGAAAGATGAGATTTTATTTGATAGGCGAG
TCAAAAGTAAAACAGAGACAATCAATGCGTACTCGTTACCCAGGAAACGT
AACCACGTGACCGTTGAGCTTACGCCCAGTCCACCAGTAGCTGTAGCGAC
ACCTTTTGTACCACCACCGCTACCGCCACAAAATAAACACCCTCGCCGCC
CACAATTTCAAATAGCTGTCTCACCTCATCATCAGCATCATAAACAAAAA
CATACACAACAATCAcatcatcaacaacaacaacaaatagTCCATCAAAA
ATCTCACGAAGATATCGTTATTGAGTACATTAACCCACCTTTTATTACAA
CAGAAAGAAAAGACGAATCAAGTAATAACACTAGTAACAGTAACCGGATG
GTTCAAACAAATGCGGAACAGTCAAGTAACGGGACGACACTTCCCTCCAC
AGATGTTGAGGATCAAGAGTCGTTATTTGGTAAAATGGTAGCAACCACAT
TACGTAAATTCAGCCCGTATCAACGAGTGCTAGCTCGAAAACAAATTCAA
GACTTATTGTTTGAAATTGAGCTACAAAATGCTTCAAACACAACGTGAAC
CGACTAAGTTTGGATGAAAACTTTCTGagtaataatttcaatttttttaa
agttgc Run BLAST on NCBI protein sequence of TCONS_00037653-protein >TCONS_00037653-protein ID=TCONS_00037653-protein|Name=TCONS_00037653-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
IILKMEENDQDELSPVHNNEIEDSMDASMVLKQWSDVALEELINAYEPHT
CLWITTSDEYKDPDKKETALQEVDRTMQQFHFSRQEYTKKWTILRGQFLR
EVRRERSSNHVPGWRWYPKLEFLKKDEILFDRRVKSKTETINAYSLPRKR
NHVTVELTPSPPVAVATPFVPPPLPPQNKHPRRPQFQIAVSPHHQHHKQK
HTQQSHHQQQQQIVHQKSHEDIVIEYINPPFITTERKDESSNNTSNSNRM
VQTNAEQSSNGTTLPSTDVEDQESLFGKMVATTLRKFSPYQRVLARKQIQ
DLLFEIELQNASNTT Run BLAST on NCBI transcript from alignment at sc0001676:19712..20717 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037653 ID=TCONS_00037653|Name=TCONS_00037653|organism=Clytia hemisphaerica|type=transcript|length=1006bp|location=Sequence derived from alignment at sc0001676:19712..20717 (Clytia hemisphaerica)
gcaactttaaaaaaattgaaattattactCAGAAAGTTTTCATCCAAACT
TAGTCGGTTCACGTTGTGTTTGAAGCATTTTGTAGCTCAATTTCAAACAA
TAAGTCTTGAATTTGTTTTCGAGCTAGCACTCGTTGATACGGGCTGAATT
TACGTAATGTGGTTGCTACCATTTTACCAAATAACGACTCTTGATCCTCA
ACATCTGTGGAGGGAAGTGTCGTCCCGTTACTTGACTGTTCCGCATTTGT
TTGAACCATCCGGTTACTGTTACTAGTGTTATTACTTGATTCGTCTTTTC
TTTCTGTTGTAATAAAAGGTGGGTTAATGTACTCAATAACGATATCTTCG
TGAGATTTTTGATGGActatttgttgttgttgttgatgatgTGATTGTTG
TGTATGTTTTTGTTTATGATGCTGATGATGAGGTGAGACAGCTATTTGAA
ATTGTGGGCGGCGAGGGTGTTTATTTTGTGGCGGTAGCGGTGGTGGTACA
AAAGGTGTCGCTACAGCTACTGGTGGACTGGGCGTAAGCTCAACGGTCAC
GTGGTTACGTTTCCTGGGTAACGAGTACGCATTGATTGTCTCTGTTTTAC
TTTTGACTCGCCTATCAAATAAAATCTCATCTTTCTTTAAGAATTCTAGT
TTGGGATACCAACGCCAGCCGGGAACATGGTTAGATGATCTCTCGCGTCG
AACTTCTCTTAAAAACTGACCTCTTAGGATTGTCCATTTTTTAGTATATT
CTTGTCTAGAGAAATGAAATTGTTGCATGGTACGATCGACTTCCTGAAGT
GCAGTTTCTTTTTTATCTGGATCCTTGTATTCATCGCTGGTAGTTATCCA
AAGACATGTGTGAGGCTCATACGCGTTGATTAATTCTTCAAGAGCAACGT
CACTCCACTGTTTTAAAACCATACTGGCATCCATGGAATCTTCTATTTCA
TTGTTATGGACTGGAGAGAGTTCGTCTTGGTCGTTCTCCTCCATTTTTAA
AATGAT Coding sequence (CDS) from alignment at sc0001676:19712..20717 >TCONS_00037653 ID=TCONS_00037653|Name=TCONS_00037653|organism=Clytia hemisphaerica|type=CDS|length=948bp|location=Sequence derived from alignment at sc0001676:19712..20717 (Clytia hemisphaerica)
TCACGTTGTGTTTGAAGCATTTTGTAGCTCAATTTCAAACAATAAGTCTT
GAATTTGTTTTCGAGCTAGCACTCGTTGATACGGGCTGAATTTACGTAAT
GTGGTTGCTACCATTTTACCAAATAACGACTCTTGATCCTCAACATCTGT
GGAGGGAAGTGTCGTCCCGTTACTTGACTGTTCCGCATTTGTTTGAACCA
TCCGGTTACTGTTACTAGTGTTATTACTTGATTCGTCTTTTCTTTCTGTT
GTAATAAAAGGTGGGTTAATGTACTCAATAACGATATCTTCGTGAGATTT
TTGATGGActatttgttgttgttgttgatgatgTGATTGTTGTGTATGTT
TTTGTTTATGATGCTGATGATGAGGTGAGACAGCTATTTGAAATTGTGGG
CGGCGAGGGTGTTTATTTTGTGGCGGTAGCGGTGGTGGTACAAAAGGTGT
CGCTACAGCTACTGGTGGACTGGGCGTAAGCTCAACGGTCACGTGGTTAC
GTTTCCTGGGTAACGAGTACGCATTGATTGTCTCTGTTTTACTTTTGACT
CGCCTATCAAATAAAATCTCATCTTTCTTTAAGAATTCTAGTTTGGGATA
CCAACGCCAGCCGGGAACATGGTTAGATGATCTCTCGCGTCGAACTTCTC
TTAAAAACTGACCTCTTAGGATTGTCCATTTTTTAGTATATTCTTGTCTA
GAGAAATGAAATTGTTGCATGGTACGATCGACTTCCTGAAGTGCAGTTTC
TTTTTTATCTGGATCCTTGTATTCATCGCTGGTAGTTATCCAAAGACATG
TGTGAGGCTCATACGCGTTGATTAATTCTTCAAGAGCAACGTCACTCCAC
TGTTTTAAAACCATACTGGCATCCATGGAATCTTCTATTTCATTGTTATG
GACTGGAGAGAGTTCGTCTTGGTCGTTCTCCTCCATTTTTAAAATGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037653-exon-sc0001676-1491911889:19712..20717 | TCONS_00037653-exon-sc0001676-1491911889:19712..20717 | Clytia hemisphaerica | exon |
| TCONS_00037653-exon-sc0001676-1510915933:19712..20717 | TCONS_00037653-exon-sc0001676-1510915933:19712..20717 | Clytia hemisphaerica | exon |
| TCONS_00037653-exon-sc0001676-1575043694:19712..20717 | TCONS_00037653-exon-sc0001676-1575043694:19712..20717 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001676 | supercontig | sc0001676:19712..20717 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003677 |
DNA binding |
Blast
The following BLAST results are available for this feature:
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