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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037570 ID=TCONS_00037570|Name=TCONS_00037570|organism=Clytia hemisphaerica|type=transcript|length=2595bp
GGACGAAGAATGGACGAAGGATTCCACATATCCCAAATATCCCAAACCAC
CTGATTATTCATTTAAAGttctaaataataaatcaaagtcTCTTTATTTT
ACATAATTGGAACAAAAATCTTTTGCGATACTTAATTTCACATTTgggga
aaaaacaaaacatatgaGTGTGCGTTTGACCAAAATCTTTTGGGATACTC
GATTTCACATTTGTGAAATAGCAAAACACAAGCGTGTGTGGTTAAAGTAA
ACTTTTTTGGATACTTGATTTCACGCATGTGATTTCAAATTTCACAGTTC
AGAAAAATGTTTGGGTTtattttttgggtatttcccaCTCGTCTGAAAGT
TTGcaaaatcacatgcgtgtgattGGCGTGGGAAATAGCATTCTCATAAT
TTATGATTATTGAATTTCACACGCGTGTGATTTGACGAGTggtttgatga
ttttttcctatGTAGGTGGTGTCCATTCAGCAGACTGGGGGTGTGTATTT
GAACACCAGTGAGTCCGAAGAggaatcttctttttcaaaataaatctcaA
GCAACCTTTTTCCTCTACCATAATAATTCGTACCATTGTGAACAAAAGAT
CCTTTACGAGACAAATCAAGTTTGTCgattaaatctttaattttgccAAT
AGTCTCTAATCCATCCCTAACTTTCAGCTCTTTCGtttcttgattttcaa
aatgaacAACAACTCTTTGAAGGTAATTAACTTTGTGTTTGGAACAAAAG
GCATTAACAATTGCAATATCATCATCACCAACCAAAACACTGGCCATGTT
AAGACAAACAAAGATATCAATATTTTCGTTGTAGCATTTTGTTTCCTCAT
CAAAAAACAAGGATGCCAATGATTTTTTCCAATGAAACAGACTTTGATCC
TTCAAATAATCGTTCTTGAAAAACAGAACAGGAGGGAAAAAACCAAAATG
AGCACGTAACTTCATGCTCAACTCATCAAGAGTTGGGATATCAGAAACAG
AATACTTCTCAACAAGGGTGCTTTTGTTGTGGTAATACACTGTGACGGTT
TTCAAAGCTTTGATACCCTTGCTCAAATATAATTCATTCATCAAATTCTC
CGACAGTCCCTTCACTGCTATATATATGCCAACATTTTTAAGGATAATTC
TTTTACtataaaaatattcttgatCCGTGATATCAAAGATATTAGCAATC
TTTGTATCCATACTTCTAAGTTCCTGACCATGAGCTATGAGAACAAAATG
AGGTGCGGGAATTCCAAGTTCTTTGGCGATACACAAAAACAAATCTTCAA
CAGTTGAATTCAATCCGAAACTGTAATCAAATAGCGTACCATTCCCACTA
ATAACAGGAAGAGGATCAAAaacgaaaatgttattttttgtgCAGATTTT
TTGAACCAGGGTATCTTCTGttggaaagatgaaaaaattgatttcaaaaa
acCCATTGATCAAACTATCACAATAGGATGAAAACTTGTACATCAAAtga
cattcttccaaaaagaaATCATCCAAATAAAAGACTTGCAATTCAATAGG
AAttcccaatttttcatttaCCTTTCTCTTCAATGTAAGTGTATCAATAA
TATCATGACCATCAAATTCAAGTACTACGGTATTATCAGATAAGTTTTTC
AGGCGTATTCCAGGAATAGTCAGTGTGTCCCTCATACTTGCCCAATGATC
ATCTTCGTTGTCTTTAAACATTACCTGAACACTTGCACCCGCATAAAATT
CCCCACCCTTGAAAAAGAGATCAACCAGGAATGAATCGTCTTCTATAGGT
TTCAAAGGTAATTCCTCAATTTCGTCAAAATCTTCATGATGATCATGGTA
AAGGAAAAACGACTCCTTGTTCATTGCATACTCTTCATCAAGTTGGTTCT
TGATATCAGAAACTTTACTTCCAAGAGAAACTTGGACACTATCAAGGATA
GATTGTCGTGAGGTGAAGACATGGATATGAACCTCCTCGATCTCACTATT
GATACCAATTTCCTTACAAATAGCACCTATTTCCAGATCATCAGAACCCT
TAACAAAAAATTTCAGAGATATATCATCTTTTCCCTGTTGCAGCAATTCT
TTAAATCCCCTATCTGACAAAACCAGATGATCTTTGTTAACAAGTATTTG
TAAATGTTCAGGTATGCCAAtctcatttttaatttgttcctTCAGATCTT
TCAATGTTGACACATCTTTTTGGGATAGAGCAATAGACTTTTGTTGAGAC
ACTACTATAGTGATCGTCATCTTCTATAACACAATAATTTGATAATTTGC
CTGAAATAAATGCAATGTGAAATTAAGTTCACATCAGGTTTTTTTAATTA
GAGGAGGGGGTGACatgtgccaactctcacgcattgggcGTGAGACTCAC
AAACTGATTTTCTGAATTTTGGTAAAAAGTATTTTTACATTCcatatttg
gaaaatatttccGATTTTCTAATTcctgaaaatcagaaaaacggAGCTAC
TGTAAGATCAAAGGAGAACAATGCTTTAAAGGTAACAATAAATCCTTTAC
CAGGAAACTTCTTTATGATtccaaaaagtccaaaaagaaACAGCT Run BLAST on NCBI transcript from alignment at sc0001656:9558..12264+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037570 ID=TCONS_00037570|Name=TCONS_00037570|organism=Clytia hemisphaerica|type=transcript|length=2707bp|location=Sequence derived from alignment at sc0001656:9558..12264+ (Clytia hemisphaerica)
GGACGAAGAATGGACGAAGGATTCCACATATCCCAAATATCCCAAACCAC
CTGATTATTCATTTAAAGttctaaataataaatcaaagtcTCTTTATTTT
ACATAATTGGAACAAAAATCTTTTGCGATACTTAATTTCACATTTgggga
aaaaacaaaacatatgaGTGTGCGTTTGACCAAAATCTTTTGGGATACTC
GATTTCACATTTGTGAAATAGCAAAACACAAGCGTGTGTGGTTAAAGTAA
ACTTTTTTGGATACTTGATTTCACGCATGTGATTTCAAATTTCACAGTTC
AGAAAAATGTTTGGGTTtattttttgggtatttcccaCTCGTCTGAAAGT
TTGcaaaatcacatgcgtgtgatNGGATACTTGATTTCACGCATGTGATT
TCAAATTTCACAGTTCAGAAAAATATGTTTGAGTTTTTAGTATTTCCCAC
TCGtctgaaagttttcaaaatcacatgcgtgtgattGGCGTGGGAAATAG
CATTCTCATAATTTATGATTATTGAATTTCACACGCGTGTGATTTGACGA
GTggtttgatgattttttcctatGTAGGTGGTGTCCATTCAGCAGACTGG
GGGTGTGTATTTGAACACCAGTGAGTCCGAAGAggaatcttctttttcaa
aataaatctcaAGCAACCTTTTTCCTCTACCATAATAATTCGTACCATTG
TGAACAAAAGATCCTTTACGAGACAAATCAAGTTTGTCgattaaatcttt
aattttgccAATAGTCTCTAATCCATCCCTAACTTTCAGCTCTTTCGttt
cttgattttcaaaatgaacAACAACTCTTTGAAGGTAATTAACTTTGTGT
TTGGAACAAAAGGCATTAACAATTGCAATATCATCATCACCAACCAAAAC
ACTGGCCATGTTAAGACAAACAAAGATATCAATATTTTCGTTGTAGCATT
TTGTTTCCTCATCAAAAAACAAGGATGCCAATGATTTTTTCCAATGAAAC
AGACTTTGATCCTTCAAATAATCGTTCTTGAAAAACAGAACAGGAGGGAA
AAAACCAAAATGAGCACGTAACTTCATGCTCAACTCATCAAGAGTTGGGA
TATCAGAAACAGAATACTTCTCAACAAGGGTGCTTTTGTTGTGGTAATAC
ACTGTGACGGTTTTCAAAGCTTTGATACCCTTGCTCAAATATAATTCATT
CATCAAATTCTCCGACAGTCCCTTCACTGCTATATATATGCCAACATTTT
TAAGGATAATTCTTTTACtataaaaatattcttgatCCGTGATATCAAAG
ATATTAGCAATCTTTGTATCCATACTTCTAAGTTCCTGACCATGAGCTAT
GAGAACAAAATGAGGTGCGGGAATTCCAAGTTCTTTGGCGATACACAAAA
ACAAATCTTCAACAGTTGAATTCAATCCGAAACTGTAATCAAATAGCGTA
CCATTCCCACTAATAACAGGAAGAGGATCAAAaacgaaaatgttattttt
tgtgCAGATTTTTTGAACCAGGGTATCTTCTGttggaaagatgaaaaaat
tgatttcaaaaaacCCATTGATCAAACTATCACAATAGGATGAAAACTTG
TACATCAAAtgacattcttccaaaaagaaATCATCCAAATAAAAGACTTG
CAATTCAATAGGAAttcccaatttttcatttaCCTTTCTCTTCAATGTAA
GTGTATCAATAATATCATGACCATCAAATTCAAGTACTACGGTATTATCA
GATAAGTTTTTCAGGCGTATTCCAGGAATAGTCAGTGTGTCCCTCATACT
TGCCCAATGATCATCTTCGTTGTCTTTAAACATTACCTGAACACTTGCAC
CCGCATAAAATTCCCCACCCTTGAAAAAGAGATCAACCAGGAATGAATCG
TCTTCTATAGGTTTCAAAGGTAATTCCTCAATTTCGTCAAAATCTTCATG
ATGATCATGGTAAAGGAAAAACGACTCCTTGTTCATTGCATACTCTTCAT
CAAGTTGGTTCTTGATATCAGAAACTTTACTTCCAAGAGAAACTTGGACA
CTATCAAGGATAGATTGTCGTGAGGTGAAGACATGGATATGAACCTCCTC
GATCTCACTATTGATACCAATTTCCTTACAAATAGCACCTATTTCCAGAT
CATCAGAACCCTTAACAAAAAATTTCAGAGATATATCATCTTTTCCCTGT
TGCAGCAATTCTTTAAATCCCCTATCTGACAAAACCAGATGATCTTTGTT
AACAAGTATTTGTAAATGTTCAGGTATGCCAAtctcatttttaatttgtt
cctTCAGATCTTTCAATGTTGACACATCTTTTTGGGATAGAGCAATAGAC
TTTTGTTGAGACACTACTATAGTGATCGTCATCTTCTATAACACAATAAT
TTGATAATTTGCCTGAAATAAATGCAATGTGAAATTAAGTTCACATCAGG
TTTTTTTAATTAGAGGAGGGGGTGACatgtgccaactctcacgcattggg
cGTGAGACTCACAAACTGATTTTCTGAATTTTGGTAAAAAGTATTTTTAC
ATTCcatatttggaaaatatttccGATTTTCTAATTcctgaaaatcagaa
aaacggAGCTACTGTAAGATCAAAGGAGAACAATGCTTTAAAGGTAACAA
TAAATCCTTTACCAGGAAACTTCTTTATGATtccaaaaagtccaaaaaga
aACAGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037570-exon-sc0001656-1491911889:9558..9919 | TCONS_00037570-exon-sc0001656-1491911889:9558..9919 | Clytia hemisphaerica | exon |
| TCONS_00037570-exon-sc0001656-1510915933:9558..9919 | TCONS_00037570-exon-sc0001656-1510915933:9558..9919 | Clytia hemisphaerica | exon |
| TCONS_00037570-exon-sc0001656-1575043694:9558..9919 | TCONS_00037570-exon-sc0001656-1575043694:9558..9919 | Clytia hemisphaerica | exon |
| TCONS_00037570-exon-sc0001656-1491911889:10032..12264 | TCONS_00037570-exon-sc0001656-1491911889:10032..12264 | Clytia hemisphaerica | exon |
| TCONS_00037570-exon-sc0001656-1510915933:10032..12264 | TCONS_00037570-exon-sc0001656-1510915933:10032..12264 | Clytia hemisphaerica | exon |
| TCONS_00037570-exon-sc0001656-1575043694:10032..12264 | TCONS_00037570-exon-sc0001656-1575043694:10032..12264 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001656 | supercontig | sc0001656:9558..12264 + |
Blast
The following BLAST results are available for this feature:
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