XLOC_022328 (gene) - C. hemisphaerica

Overview
NameXLOC_022328
Unique NameXLOC_022328
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001656:1755..12264+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022328 ID=XLOC_022328|Name=XLOC_022328|organism=Clytia hemisphaerica|type=gene|length=10510bp|location=Sequence derived from alignment at sc0001656:1755..12264+ (Clytia hemisphaerica)
aggcaaaaatattttaagattttgtgcAGGACGAAGAATGGACGAAGGAT TCCATATATGTCAAATATTCCCAACCACCTGATTattccttttcttttct tttcctgttctaaataataaatcaaagtcTCTTTATTTTAAATAATTGGA ACAAAAATATATGTGTGTGCGTTTGACCAAAATCTTTCATATTTGTGAAA TATCAAAACACAAGCGTGTGTGGTTAAAGTAAACTTTTTTGGATACTTCA TTTCACGCATGTGATATCAAATTTTACAGTCCAGAAAAATATGTTTGGGT TTTTAGTATTTCCCACTCGTGTGAAAGTTTGcaaaatcacatgcgtgtga ttCGCATGGGAAATAGCAATCTCATAATTTGTGATTATTGAATTTCACAC GCGTGTGATTTGACGAgtgatttgatgattttttcctatGCAGGTGGTGT ATTTTCAGCAGACTGGGGGTGTGTATTTGAACACCAGTGAGTCCGAAGAg gaatcttctttttcaaaataaatctcaAGCAACCTTTTTCCTCTACCATA ATCCGTACCATTGTGAACGAAAGATCCTTTACAAGACAAATCAAGTTTGT CaactaaatctttaattttgccAATAGTCTCATACCCATCCCTAACTTTC AGCTCTTtcgttttttgattttcaaaatgaacAACAACTCTTTGAAGGTA ATTAACTTTGTTCTTGGAACAAAAAGCATTAACAATGGCAATATCATCAT CACCAACCAAAACACTGGCCATGTCAAGACAAACAAAGATATCAATATTT TCGTTGTAGCATTTTGTCTCCTCATCAAAAAACAAGGATGCCAATGATAT TTTCCAATGAAACTGCATTTGATTCTTCAAATAATCGTTCTTGAAAAACA GAACAGGAGGGAAAACACCAAAATGAGCACGTAACTTCATGCTCAACTCA TCAAGAGTTGGGATATCAGAAACGGAATATTTCTCAACAAGGGTGCTTTT GTTGTGGTAAAACACTGTGACGGTTTTCAAAGCTTTGATACCCTTGCTCA AATATAATTTATTCATCAAATTCTCCGACAGTCCCTTCACTGCTATATAT ATGCCAACATTTTTAAGGATAATTCTTTTACtataaaaatattcttgatC CGTGATATCAAAGATATTAGCAATCTTTGTATCCATACTTCTAAGTTCCT GACCATGAGCTATGAGAACAAAATGAGGTGCGGGAATTCCAAGTTCTTTG GCGATACACAAAANTTATCCATATTTCTAAGTTCCTGACCATCAGCTATG AGAACAAAATGAGGTGCGGGAATTCCAAGTTCTTTGGCGATACACAAAAA CAAATCTTCAACAGTTGAATTCAATCCGAAACTGTAATCAAATAGCGTAC CATTCCCACTAATAACAGGAAGAGGATCAAAaacgaaaatgttattttct gtGCAGATTTTTTGAACTAGGGTATCTTCTGttggaaagatgaaaaaatt gatttcaaaaaacCCATTGATCAAACTATCACAATAGGATGAAAACTTGT ACACCAAATGACATTCTTCCCAAAAGAAATCATCCAAATAAAAGACTTGT AATTCAATAGGAATTCCCAATTTTTCATTCACCTTTCTCTTCAATGTAAG TGTATCAATAATATCATGACCATCAAATTCAAGTACTACGGTATTATCAG ATAAGTTTTTCAGGCGTATTCCAGGAATGGTCAGTGTGTCCCTCATTCTT GCCCAATCATCATCTTTGTTGTATTTAAACAACACCTGAACACTTGCACC CGCATAAAATTCCCCACCCTTGAAAAAGAGATCAACCAGGAATGAATCCT CTTCTATAGGTTTTAAAGGTAATTCCTCAGTTTCGTCAAAATCTTGATGG TAAAGGAAAAACGACTCCTTGTTCATTGCATACTCTTCATCAAGTTCGTT CTTGATATCAGAAACTTTACTTCCAAGAGAAACTTGGACACTATCAAGGA TAGATTGTTGTGAGGCGAAGACATGGATATCAACCTCCTCGATCTCACTA TTGATACCAATTTCCTTACAAATAGCACCTATTTCCAGATCATCAGAAcc tttaacaaaaaatttcagAGATATATCATCTTTTCCCTGTTGCAGCAATT CTGCAAATCCACTATCTGATAAAACCAGATGATCTTTGTTAACAAGTATT TGTAAATGTTCAGGTATGCCAAtctcatttttgatttgttCCTTCAGATC TTTCAATGTTGACACATCTTTTTGGGATAGAGCAATAGACTTTTTTTGAG ACACTACTATAGTGATCGTCATCTTCTATATCACAATAATTTGATAATGT CCCTGAGATAAACGCAAATGTGAAAGAAATTACACAACGAAAAGGTTCAA CACTGTGAATTTAATTTTACCAAGTTCTATAAATGAagcaaaatgaagca aaatccttttgctaattttttttgttggaCCAGATAAATGGAAAGTAATA GAACAAGCGCTTCTCTGATTACCAAAAGTATTCTGATCGTTTCTATTGAA AACTTCTTCGATTTGGCTTTAATTAGGTCATTAGAAAAGGTTCAcaaaaa acggctcgtcatgcGAAGAGTGCTGGTTTTCTatacgtcgatcaaattta aaattcctctcaaatctagaggaaaagacgttttacaaaaagtgttactg catgaaaaactgtaacatctctactttatttcccagaagttctttttcaa aattttcaatttcaacaatttttttcaatcgcttaaaaatgagtagcttt tttctaatggcccccaaaacgtaggttttcaattttagcgatttttcgat tgtttttttctttgagatacgaatacaaaattttgaccatagtttggaat TGTGATTTAGCGGGTTTCGGGGATAagtttgtttgataaaaaattttgaa agttaaaatcaaattaataagcccagtggtaatagagggagaaactatga acatattatttgttgttttcccttaaatttacgacccgatggatgtaaaa tttatgattttcatgaaatattccaagatttttgatgataaaaagtccaa actgaaaattcagaaattttcaaactgaaaattttgatttaagaaCGTTT tcatcaagtttctgaaaaccaatctcttttgaaaatagttccattcatgt atggaatatgctgcgaaaattttaggaaaaaaacCTTAACagaaactgaa aataattaagCTTTATTacaggtatttttctcctataccgaattacttcg aataaacgcccccttcttttaaacgcccctcctaaaaggaGAATTATTTA ACAAACGCCaaatcaaataaacgccccctctaagggaggggcgtttatta gaaacttgtgacttaAATACTTTGAtacaaaatttcgaaaaggattgaaa aggaagattttagtctTTTTTGTAACCAGATCAGTTTTGATGCAATTTTA GTTGCTGACCCAAAGaaatttgcactaaaatcctgGTATAGAACTAAAAG TAAGAGTAGATTTGCTCTAAGCATTCAACATTAGActcaaataatttaat aaacgccccctacTTCGAGAAGATTtgcaagaaattcatcaaaaacagat ttaatttcttttttctcgcACTTTAGCTTTTTATCTAATTATGCCGTCGT GATGCCGTTATATCATTAGAATCGCTAGAATATTCCGAGCAAGAAATATA GGTATCTTTTGGTATGAAAGAGGTGttcccaaaatataagcccctaaAGT TCTCACATAATTTgacctgaaacaaaagaatttcgtcaCACCACGCTGAT TATACAAAGTTTTTAGAgtgacaacaaaagaaatccatcaactcgaaaca aactcccttaagggcaaaggacctggtatatgacaAGTCGTGGTTTCATT GTTTTCGAGAAGCACTTTTTTTATTCCTTTCCATTACTCTGGTTAGACAG AAGATTTGATGGGTTTTGTTTTAGACCAATAtgctttatcattttttttt aaatagctcATATACATTTGCAGAAATACTTACataaaaaacaaagtcaa tGTCATCTGAAATTTCTTTGATCAGTTTGTTATTAGAAATCTTTGTGTCC AATGTGCTAAAGTCAAAAGAAGTTTGCTtaggctgggcttaaaaaattgt tggtttgccgtcacccgaccctagattttggaggtcggtcggtcggtcgg aatttttttttattttggcgatttgtTAACTGTTtggttaacagtttgtt tacatttaggtaattttgaataataaaaagaagtgctagcagggaattta cgattcttatgcttgagacaaacaagatacgacTTTTGATTtgttattgt ttgaagtttttgaaggaaaaaaatcttctttaaaatggcaataaaatttt ttgggtcggcatgTTTCGAGGTAGGGTGACTGCAANCATCAAAAAcagat ttaatttcttttttcttgcaCTTTAGCTTTTTATCTAATTATGCCGTCGT GATGCCGTTATATCATTAGAATCGCTGGAATATTCCGAGCAAGAAATATA GGTATCTTTTGGTATGAAAGAGGTGttcccaaaatataagcccctaaAGT TCTCACATAATTTgacctgaaacaaaagaatttcgtcaCACCACGCTGAT TATACAAAGTTTTTAGAgtgacaacaaaagaaatccatcaactcgaaaca aactcccttaagagccagtttttttaagagcggggcaggtccaatagttt gaaacttagatttttttcatttttggatatgttattaagtacaatgaact gagtaaaatcccaaaatattttggtctgaaaatccataatggcggattta tgccaatttgaaNGACCTCCTTCAAAATTACTTTAACAAAGAAAcattaa caaagaaaaattaacaaataatAAGCAGCTTTATTAGTTGGAAAAATATA GAATTGGTGAGTACAGTGAACATCCATAACGTTTGTCCAGtacaaagctt tttttatatattcaGTATTCGTCTTTTGAGATGCAAACATGTCATCAAAC TGCTTCACCAACTCAATTAATGGAAgtttgcatttttcaaagattgcatC ATCTGACACATGGATTTTCTCAGGGGAAGGACTGAGGACCAGTCGAAGCC ACGCATCTCACATATTTTAGGTACATgtttcttaaccctattcggcctaa gggggctgtttctgttcagaggtcaaattattggtaatagctcctgaaaa aataaagcttttggcatgaaattttctgtaaattcctaattttcatttaa cttaaaaaaaaaattccaatacaaatatattttttatgtcaaatatatcg tttaaaccgtaatttattgaatagtTAGGACAAAATAAGCTTTttaactc aggcaactttttctaaagcctttgttagaatacaatagctattcataaga acaaaggaaattttcggttttttctCACTTtaggcatgatgagtgacgtc atcaaaaaaatcttttgtcaaaagttatcttacgtgacaaggatcttgtg tgccgaatttcattcaaaaagacccactagatcaaaagttaaggggtggt acaggaaaagccccctagttttgaaccacCCCTAagagcctaggttgaat agggttaaattaATGTAATGGAGACCAAAAATTATTTGAGTTTTAGGGGG GGACGGGCACgatcaaaacaacaacaaatattCATTCCTATAGCTTCCAA GGAAGTAAGTTTGAAGTACTTTCCATATCAAAGGATTTTAAATGTTTCTG TTAAGAAAGAAATGTATTTACTATTAGAGGAGCTACCACTGGTTGCAAAC TTGCTGTAATCGGTCTTCTTGACAGACCTGtaaagatatatttttcaaaa aggaaagacttcttgaaacttgaaatattCCTTGAAAAACGTTTAGGCAC AAGAAAAATCGGTGCTTTGAACTAAATTGATGATAATTTCAATAATAACA ATTTGTACCTTCCAGTATTTTCAGGGAAACTTGCTCCTCCTCACATCACG GtgtttcatttgttttgttttttatatcaTAAATCCTAGAAAAAATATGC AGATAgtatcaaaaaaatgaaaatcaaggaaaatatttttctttattaag aCTATTTATATAGAcaatatttttcgaaaagaCAATAATTTTCCATGAAC TTGtccatgaaattttcaaaaaggttaATGGTGGATTGAACGTTAAACTT AATGATCAAGGATAATATAGACCATTGAAAAGCTAATTATAATCTCCGCA CCCCTTACGTggacttttttctggaaaatttcatTCTGTTTATTACATTA TTATCACATGTCTGGGTACACATAAAAACATGTTgagaatttatattttt atgtttttgaaatacaaaaaaaataaagatttgtgTCGAAGGCGTTACAA TCTAAATCTAATAATTTAAATAGAAATATGCTTTGATAATATATACAGAA ATATATTATGAAAATAATTGTAAAGTTAACAGAAGgcaaattttacaaat gaaaaattgatcaaaaaataattcaagaaaataattatGTAAAAGATTTG TATTAAATATAAGggagaggtcgatagacctgtgaaatataatacTATGA ATGAATAAATTATTATAATTGACATTGATAATTGACAAATATGCATCATC TAAAAAATTGGCGTCAGAATTTTAAACGAAGAAGCCATTGTATATGCAGG GGGGTCCATGTACGAAACAGCGGCATGTATCAGTACTTTGtagcaaattt cgattttaaacacccacccacccctatagtacaaactgtacaaaatacta tccagcaaactcccaaaaacaccccagcaccccctatattttacaatata ctatccagtacTATCAAGCAAACTGCCAAATATACCCCAACTCGGGGGGA GTTACATAGTACAACATACTATCCAGAAAACTACCAAATATACCCCTACA CCtcttcataatataaaaattttaagcaaaaaaacttgaaactttggggc aagttttttattcttcccataaaaagattttcaaaaagttttctcgaaaa ttgacaaaaacaattgagaatttaaaaaaaatttcgacaaaaatctaaaa taaatcacaatttgatttgatcttggctttttagtacacaaatactaagc agaaaatccgaaatttgaccctgacaccccctgtatagtacacgtatact aaacagcaaatcagaaatttgaccctgacaccccctgtatagtacacgta tactaaacagcaaatcagaaatttgaccctgacacccccatGTATTGTAA CAAGTACTAAAcagcaaaacttttttgaaaacaccCACCCAATGATACAT GCCACTTTTTTGTACATGGAGCCTCCCCTGGTATATGAAGATTTCTCAGA TGATTTTAGCTGATGATTGTCCTCCATACGGACAGCATGaaacttaaagg gataatcagatagtttgagattttttgcctgaagaaaaccTCGTTGTTTT GAGTAAAATCGCGAAGTATTTTTGTCTAACTATATTTTAAAGTCAAGATA TTATCACAatctaaaatttctgaaaatgggttCACACAAGGTTCTTATGT TGAAAttcatttgatttttactaaaagtcaaaaacttgtaacttaatTAT CTCGACTTTGCTTTGGGAAATATTagggcaaaaatattttaagattttgt gcAGGACGAAGAATGGACGAAGGATTCCACATATCCCAAATATCCCAAAC CACCTGATTATTCATTTAAAGttctaaataataaatcaaagtcTCTTTAT TTTACATAATTGGAACAAAAATCTTTTGCGATACTTAATTTCACATTTgg ggaaaaaacaaaacatatgaGTGTGCGTTTGACCAAAATCTTTTGGGATA CTCGATTTCACATTTGTGAAATAGCAAAACACAAGCGTGTGTGGTTAAAG TAAACTTTTTTGGATACTTGATTTCACGCATGTGATTTCAAATTTCACAG TTCAGAAAAATGTTTGGGTTtattttttgggtatttcccaCTCGTCTGAA AGTTTGcaaaatcacatgcgtgtgatNGGATACTTGATTTCACGCATGTG ATTTCAAATTTCACAGTTCAGAAAAATATGTTTGAGTTTTTAGTATTTCC CACTCGtctgaaagttttcaaaatcacatgcgtgtgattGGCGTGGGAAA TAGCATTCTCATAATTTATGATTATTGAATTTCACACGCGTGTGATTTGA CGAGTggtttgatgattttttcctatGTAGGTGGTGTCCATTCAGCAGAC TGGGGGTGTGTATTTGAACACCAGTGAGTCCGAAGAggaatcttcttttt caaaataaatctcaAGCAACCTTTTTCCTCTACCATAATAATTCGTACCA TTGTGAACAAAAGATCCTTTACGAGACAAATCAAGTTTGTCgattaaatc tttaattttgccAATAGTCTCTAATCCATCCCTAACTTTCAGCTCTTTCG tttcttgattttcaaaatgaacAACAACTCTTTGAAGGTAATTAACTTTG TGTTTGGAACAAAAGGCATTAACAATTGCAATATCATCATCACCAACCAA AACACTGGCCATGTTAAGACAAACAAAGATATCAATATTTTCGTTGTAGC ATTTTGTTTCCTCATCAAAAAACAAGGATGCCAATGATTTTTTCCAATGA AACAGACTTTGATCCTTCAAATAATCGTTCTTGAAAAACAGAACAGGAGG GAAAAAACCAAAATGAGCACGTAACTTCATGCTCAACTCATCAAGAGTTG GGATATCAGAAACAGAATACTTCTCAACAAGGGTGCTTTTGTTGTGGTAA TACACTGTGACGGTTTTCAAAGCTTTGATACCCTTGCTCAAATATAATTC ATTCATCAAATTCTCCGACAGTCCCTTCACTGCTATATATATGCCAACAT TTTTAAGGATAATTCTTTTACtataaaaatattcttgatCCGTGATATCA AAGATATTAGCAATCTTTGTATCCATACTTCTAAGTTCCTGACCATGAGC TATGAGAACAAAATGAGGTGCGGGAATTCCAAGTTCTTTGGCGATACACA AAAACAAATCTTCAACAGTTGAATTCAATCCGAAACTGTAATCAAATAGC GTACCATTCCCACTAATAACAGGAAGAGGATCAAAaacgaaaatgttatt ttttgtgCAGATTTTTTGAACCAGGGTATCTTCTGttggaaagatgaaaa aattgatttcaaaaaacCCATTGATCAAACTATCACAATAGGATGAAAAC TTGTACATCAAAtgacattcttccaaaaagaaATCATCCAAATAAAAGAC TTGCAATTCAATAGGAAttcccaatttttcatttaCCTTTCTCTTCAATG TAAGTGTATCAATAATATCATGACCATCAAATTCAAGTACTACGGTATTA TCAGATAAGTTTTTCAGGCGTATTCCAGGAATAGTCAGTGTGTCCCTCAT ACTTGCCCAATGATCATCTTCGTTGTCTTTAAACATTACCTGAACACTTG CACCCGCATAAAATTCCCCACCCTTGAAAAAGAGATCAACCAGGAATGAA TCGTCTTCTATAGGTTTCAAAGGTAATTCCTCAATTTCGTCAAAATCTTC ATGATGATCATGGTAAAGGAAAAACGACTCCTTGTTCATTGCATACTCTT CATCAAGTTGGTTCTTGATATCAGAAACTTTACTTCCAAGAGAAACTTGG ACACTATCAAGGATAGATTGTCGTGAGGTGAAGACATGGATATGAACCTC CTCGATCTCACTATTGATACCAATTTCCTTACAAATAGCACCTATTTCCA GATCATCAGAACCCTTAACAAAAAATTTCAGAGATATATCATCTTTTCCC TGTTGCAGCAATTCTTTAAATCCCCTATCTGACAAAACCAGATGATCTTT GTTAACAAGTATTTGTAAATGTTCAGGTATGCCAAtctcatttttaattt gttcctTCAGATCTTTCAATGTTGACACATCTTTTTGGGATAGAGCAATA GACTTTTGTTGAGACACTACTATAGTGATCGTCATCTTCTATAACACAAT AATTTGATAATTTGCCTGAAATAAATGCAATGTGAAATTAAGTTCACATC AGGTTTTTTTAATTAGAGGAGGGGGTGACatgtgccaactctcacgcatt gggcGTGAGACTCACAAACTGATTTTCTGAATTTTGGTAAAAAGTATTTT TACATTCcatatttggaaaatatttccGATTTTCTAATTcctgaaaatca gaaaaacggAGCTACTGTAAGATCAAAGGAGAACAATGCTTTAAAGGTAA CAATAAATCCTTTACCAGGAAACTTCTTTATGATtccaaaaagtccaaaa agaaACAGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037568TCONS_00037568Clytia hemisphaericatranscript
TCONS_00037569TCONS_00037569Clytia hemisphaericatranscript
TCONS_00037570TCONS_00037570Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001656supercontigsc0001656:1755..12264 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.5 3.8 0.59 0.51 10.32 8.32 10.07 10.1 7.86 6.57 4.2 7.11 8.28 7.63 1.55 2.02 2.22 3.85 4.21 7.96 3.5 2.74 4.33 4.22 7.3 10 2.37 1.51 3.84 3.3