TCONS_00037386 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037386
Unique NameTCONS_00037386
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length919

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037386 ID=TCONS_00037386|Name=TCONS_00037386|organism=Clytia hemisphaerica|type=transcript|length=919bp
TTGAAATGGTGCGATCTAAGGGAGCCAATGAGAAACCGTTTAGACCTACC
ATTATGGAAGGGAATGGGGCACCTGGTGATTACAACAATTTGATGAGAAG
ATGTTGGGAACAAGATCCCGAGGAGAGATGTCAAATCAAAGATATCAACA
AAACTGTTCACAAACTCAATCGAGATTTTGGAATGAAAGGATCCTTGATA
GACCATATGTTAATGATGATGGAAAAATATACAAACAACTTGGAAGATAT
TGTTGCCGATCGAACTCGACAactagaagaagaaaaaatcaaaacagaaa
CACTTTTGTACAAAATGCTACCCGTGACCGTAGCAAACAAATTGAAAGAA
GGACAACCGGTATTAGCGGAACAATTCGATTCAGTGACCATTTTCTTTTC
TGATATTGTTGGCTTCACAGCATTATGTTCAGAAAGTACTCCAATACAGG
TGGTCGAAATGTTGAATGATCTATACAGTTGTTTTGATAATATCATCGAC
TCGCATGATGTTTACAAGGTTGAGACTATAGGGGATGCTTACATGGTCGT
CAGCGGTTTGCCTGTTCGAAATGGTTCGCGTCACGCAGGCGAAATCGCTA
CAATGTCTCTCGACCTCTTGTCTTCCGTACGAACATTCAGAGTGAAACAT
AAACCCGAATTACAGATGCAACTCCGAATCGGATTACACACAGGCCCTTG
CGTCGCTGGAGTGGTCGGCCTCAAAATGCCAAGATACTGTTTATTCGGGG
ATACAGTGAATTATGCGAGTCGTATGGAATCCAGTGGATTGGCATTGAGA
ATACACGTTAGTCCTGAGTGTAAAGAAATCCTGGATTTGTTGAGTGGCTA
TGAGCTGGAGGAGCGTGGACCGGTCCCTATGAAGGGTAAAGGAACAATCG
TTACCTTTTTCTTGACTGG
Run BLAST on NCBI

protein sequence of TCONS_00037386-protein

>TCONS_00037386-protein ID=TCONS_00037386-protein|Name=TCONS_00037386-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
EMVRSKGANEKPFRPTIMEGNGAPGDYNNLMRRCWEQDPEERCQIKDINK
TVHKLNRDFGMKGSLIDHMLMMMEKYTNNLEDIVADRTRQLEEEKIKTET
LLYKMLPVTVANKLKEGQPVLAEQFDSVTIFFSDIVGFTALCSESTPIQV
VEMLNDLYSCFDNIIDSHDVYKVETIGDAYMVVSGLPVRNGSRHAGEIAT
MSLDLLSSVRTFRVKHKPELQMQLRIGLHTGPCVAGVVGLKMPRYCLFGD
TVNYASRMESSGLALRIHVSPECKEILDLLSGYELEERGPVPMKGKGTIV
TFFLT
Run BLAST on NCBI

transcript from alignment at sc0001621:405..4679-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037386 ID=TCONS_00037386|Name=TCONS_00037386|organism=Clytia hemisphaerica|type=transcript|length=4275bp|location=Sequence derived from alignment at sc0001621:405..4679- (Clytia hemisphaerica)
TTGAAATGGTGCGATCTAAGGGAGCCAATGAGAAACCGTTTAGACCTACC
ATTATGGAAGGGAATGGGGCACCTGGTGATTACAACAATTTGATGAGAAG
ATGTTGGGAACAAGATCCCGAGGAGAGATGTCAAATCAAAGATATCAACA
AAACTGTTCACAAACTCAATCGAGATTTTGGAATGTAAGCGCAAACTTGT
ATCCAGTCCCTTAGCTCGCTTTTTGATAATTTTGATAGCGCTCACGATTG
GGCTTTCCCAGAAAAAAAACGTAAAGCCCCTGTTGAGGAGGTCCATTTCC
ATTCCAAGAGTGTAAAGTTTGATATGTGGCGGATTTCCATAGGAAGATAC
AAAAATCTGTCAAAAATAACTGGAATTCCATGGTGGTAGCTTTTTAAATC
CTACTAAAATTCAGAATTCCAGAGGGGTTTAAACCTGAAATTACCTGGAA
TTCTAGGGGTTTACAGCATTTCCAGCCACAGAGGGATGGACCTCCTCATA
CGGTTTTTTGGAAAAGCCCATTGTATCACGTCCATCATTAAAATCAGAAA
GTAATGCAGGTGGCTCTGGATATGAGATTGATGTAAGCGATGTAATTTAT
ATCATTCAAAAAGAAATCACCTTGTAATCACAAATATTAACCAAGTTTTT
GATCATATTTGAGGGCGGCTATCTTTTGTTGGGTGTGAGACGTGGACGCC
ACTCCTTTCTGGCTTTTTACAATTACCCCTGACCAATATCCTCAGTTGTT
GAGGACCAAGCAGAAATACATCAAATACCATTTATCAAGCTAGATCTTTG
ATCTTAGATCTTACTCGACTGGAGTCGTGCCCAGAAACTTACACATTGTA
GGGAGCTCTACCTTCAAACTAGGGTCAATTTTATCTCTTACCATGACCTC
ATAAAATAAGGTTGTTTGATAGACCTTTTGTATCATTCTTTTCGTCAATT
ATATGTTGAATTTGATTTTATCTCCCAAAGAAGGCTTTGATCTCCAAGAT
TTTGCGTTTCATCCGTCTAAAATCGAAACTTGGGAAAGGTCTTAGGTAGA
ACTATCTAAGATACTTTTGAATTTAACATTTGATAAAAGATTTTATGAAA
GATTTTTTTATCTCCCTAGCATTACACAATATAGGAAACGATCTTTTATA
GACCATGTGTTAATGATGATGGAAAATATCTTATCTCTCTAATATTGTTC
AATTATGTCTATGGCATTCGGGAAAGGATCATTGATAGACCATATGCCAA
TGATGATGGAGAATACCTTATCTCTCTAATATTACTCATGTATCTTCCTA
ACATTATACCATTCAGGAAAGGATCCTTGATAGACCATATGTTAATGATG
ATGGAAAAATATACAAACAACTTGGAAGATATTGTTGCCGATCGAACTCG
ACAACTAGAAGAAGAAAAAATCAAAACAGAAACACTTTTGTACAAAATGC
TACCCGTGTAAGTAGGGCTTTACGAGTACCAAAATACGTTAACGCAAGGC
TATATCTACATTCAATAACACTTCATTTCCTAATTAGAAACAAAACAATC
CCTGTGTATGTGTACCTCCGTATTAACCAATTTGTATTTTTCTTAGCTAG
AATACTAGTAAAGGTATTCCAAAAGACATTCTGACCAATATTGAAAAACT
GTACTGAAACTGGTTAAAAACATACTTCTTTTTATTTGCTAAGGTTCAGG
GCCAAAATACGCTCTCCATGGAATGATTAAAATCGGTTGGTTTTCCAGCC
AAGGTGTGTCCGCTGAAAATGTTATAGGAACAAACAAGTATTATTTTTAA
CAACGTAAAATGAAACTATACAAGAACATAAGACTTCGATGACCTAAATA
TTCAGAACAGAGTATTTTAAGTTTTAAGGCTTTTCGGACTCCAAAACACC
TAATTTCTTAAAGGAAAATGAAAAGAAAATACTAACAAAACTTTAAAAAA
TAAGCACATTTTAATAACACTTTTAGGCTTAAAACTTTATATTGTATCGT
GAATTAGATACATGTGTGCCCAACCAATCTTTATAAGACAAGTCTATCTT
TCTTTATTCTAAAGGACCGTAGCAAACAAATTGAAAGAAGGACAACCGGT
ATTAGCGGAACAATTCGATTCAGTGACCATTTTCTTTTCTGATATTGTTG
GCTTCACAGCATTATGTTCAGAAAGTACTCCAATACAGGTGGTCGAAATG
TTGAATGATCTATACAGTTGTTTTGATAATATCATCGACTCGCATGATGT
TTACAAGGTAGAATATACCTTAATTCAAGAAATTTTTGCAGGAAGAAATT
CTGGCGAACAACTCATTTTTGTTCAATATTTTAGCTGAAAAAAGAGGAAA
AAAAGGGGCTTTGAAGAGAAATAGAAACTAAATTGAAAAAAAATAAATTT
AGCGAGAATTTATTTAGGCGATTGACCTATAAACTTCTTTCCAGCAAAAT
TTCTTCCTTTGCGGTATTTCAACTTGACAGTTTAATTCTCTTTAGATGAA
ATTTTGGAGATTTTTATATTTTTGTTAAATCAGAATCGGCGGCGACTGAT
CAAAGCATTAGCAACTCAAAGGAAAATTATTTCATGTACTCCTTAAGTAG
ATTAATTTTTTGCGTAGACTTTTTATTTTCGAATTGATTGAGAATTCGGA
AATTTTCACAAGGGTAAAATTTCGCAAATTGGCCTCTTTTATAACTCACT
TTTTCATTTTCAAAAGAGTTTTTGGCCAAAATTTTAGATTTTCTTATAAA
AAAACGTGTATTCCTCCTTTATATTCTAGGTTGAGACTATAGGGGATGCT
TACATGGTCGTCAGCGGTTTGCCTGTTCGAAATGGTTCGCGTCACGCAGG
CGAAATCGCTACAATGTCTCTCGACCTCTTGTCTTCCGTACGAACATTCA
GAGTGAAACATAAACCCGAATTACAGATGCAACTCCGAATCGGATTACAC
ACAGGTGAGTGTAGAGATTTTTCATGTTTTGTTAAGTGACGTGTAACTTC
TGCCATTATGAAAGCAAACATTCGAATCTGTAATGGTTATTCTACGCAAA
TTAACGAGGATCGGTAATTCGTTCGAATTATATAACTTCGAATAGACCTT
TTCACAAATTACGTCACTAGCAACGCGTTTTACCTCATTTTTAAAATATT
GCTACGGTAATTGATTCTCAGAGTTCATAAAAATTTTATTTTATTTATAA
AATAACACAGACTCTGGAAATTTAATCACCTTGGCAATGGTTTCAAAACG
AGGCACTCGTTGCACTCGAAAAAATTTATAAAAAAGGCCTAATCAAGAGT
GCTATTGTACCCTAGAATTTGAAAGAAAAACAAAAAGAGAAACAAAATCA
CATACCGAAACAACCATTGATTCTTTATTATTCGTTGCAGGCCCTTGCGT
CGCTGGAGTGGTCGGCCTCAAAATGCCAAGATACTGTTTATTCGGGGATA
CAGTGAATTATGCGAGTCGTATGGAATCCAGTGGATTGGCATTGAGAATA
CACGTTAGTCCTGAGTGTAAAGAAATCCTGGATTTGTTGAGTGGCTATGA
GCTGGAGGAGCGTGGACCGGTCCCTATGAAGGTTTGTCTCTAGAGTTCTG
GCGGGAGTCCGCTTAGTTTGATTAAAAATGCCGTGCACCGAGAGAAATTT
TCCTTGTAAATTCAATTCCCCTCAAAAGCCGACCTTATCGTTAAGGGTTG
TCTGTTACAGACCCGATATATCTACGGGTAATTTCAAAATTCATTGCCGT
AGAGGGTCTGTTGTCATTGTATTTTCTAATTTGAGATTTTTCAAACCGAC
CGCTGTATTAGTATAGAGTACGGCTGAGAGAGGGGAGACGACGAGGGAAG
TGTTGCTATTTATAAATTATACTTTATCAAAATCGTAAGGACCGCGCTCG
TCTAAAATAACTAAGAATGACAACAAAGTTGCGTGATTATGCTTAAAAAT
AGGGCACCATATCAGGAAAATTTAGTTTTTTGACTTTCCAGCGCACAACA
AGACTCTTGTTGTAGAATTTTCTGCGGGATGGCTATTTTCCTCAAATGTT
TAATTTTCAAGTGCTTTCAGAAGTTTACCGTGCACGTAAGAAAATTATGA
ACAGCTGTTATCAGGTTACTAATTAGAAGCTCGACTATCCGATACGCTCC
CTTACTTGATGAAAATCCGATCCCCCTTGAAAACGGAAATGAAGAGCGTC
AACGCTATAAATCCATTTTCTCTCACTACAAATTTTACAGGGTAAAGGAA
CAATCGTTACCTTTTTCTTGACTGG

Coding sequence (CDS) from alignment at sc0001621:405..4679-

>TCONS_00037386 ID=TCONS_00037386|Name=TCONS_00037386|organism=Clytia hemisphaerica|type=CDS|length=5490bp|location=Sequence derived from alignment at sc0001621:405..4679- (Clytia hemisphaerica)
GGTAAAGGAACAATCGTTACCTTTTTCTTGACTGCCCTTGCGTCGCTGGA
GTGGTCGGCCTCAAAATGCCAAGATACTGTTTATTCGGGGATACAGTGAA
TTATGCGAGTCGTATGGAATCCAGTGGATTGGCATTGAGAATACACGTTA
GTCCTGAGTGTAAAGAAATCCTGGATTTGTTGAGTGGCTATGAGCTGGAG
GAGCGTGGACCGGTCCCTATGAAGGTTGAGACTATAGGGGATGCTTACAT
GGTCGTCAGCGGTTTGCCTGTTCGAAATGGTTCGCGTCACGCAGGCGAAA
TCGCTACAATGTCTCTCGACCTCTTGTCTTCCGTACGAACATTCAGAGTG
AAACATAAACCCGAATTACAGATGCAACTCCGAATCGGATTACACACAGG
ACCGTAGCAAACAAATTGAAAGAAGGACAACCGGTATTAGCGGAACAATT
CGATTCAGTGACCATTTTCTTTTCTGATATTGTTGGCTTCACAGCATTAT
GTTCAGAAAGTACTCCAATACAGGTGGTCGAAATGTTGAATGATCTATAC
AGTTGTTTTGATAATATCATCGACTCGCATGATGTTTACAAGGAAAGGAT
CCTTGATAGACCATATGTTAATGATGATGGAAAAATATACAAACAACTTG
GAAGATATTGTTGCCGATCGAACTCGACAACTAGAAGAAGAAAAAATCAA
AACAGAAACACTTTTGTACAAAATGCTACCCGTGAAATGGTGCGATCTAA
GGGAGCCAATGAGAAACCGTTTAGACCTACCATTATGGAAGGGAATGGGG
CACCTGGTGATTACAACAATTTGATGAGAAGATGTTGGGAACAAGATCCC
GAGGAGAGATGTCAAATCAAAGATATCAACAAAACTGTTCACAAACTCAA
TCGAGATTTTGGAATGGTAAAGGAACAATCGTTACCTTTTTCTTGACTGC
CCTTGCGTCGCTGGAGTGGTCGGCCTCAAAATGCCAAGATACTGTTTATT
CGGGGATACAGTGAATTATGCGAGTCGTATGGAATCCAGTGGATTGGCAT
TGAGAATACACGTTAGTCCTGAGTGTAAAGAAATCCTGGATTTGTTGAGT
GGCTATGAGCTGGAGGAGCGTGGACCGGTCCCTATGAAGGTTGAGACTAT
AGGGGATGCTTACATGGTCGTCAGCGGTTTGCCTGTTCGAAATGGTTCGC
GTCACGCAGGCGAAATCGCTACAATGTCTCTCGACCTCTTGTCTTCCGTA
CGAACATTCAGAGTGAAACATAAACCCGAATTACAGATGCAACTCCGAAT
CGGATTACACACAGGACCGTAGCAAACAAATTGAAAGAAGGACAACCGGT
ATTAGCGGAACAATTCGATTCAGTGACCATTTTCTTTTCTGATATTGTTG
GCTTCACAGCATTATGTTCAGAAAGTACTCCAATACAGGTGGTCGAAATG
TTGAATGATCTATACAGTTGTTTTGATAATATCATCGACTCGCATGATGT
TTACAAGGAAAGGATCCTTGATAGACCATATGTTAATGATGATGGAAAAA
TATACAAACAACTTGGAAGATATTGTTGCCGATCGAACTCGACAACTAGA
AGAAGAAAAAATCAAAACAGAAACACTTTTGTACAAAATGCTACCCGTGA
AATGGTGCGATCTAAGGGAGCCAATGAGAAACCGTTTAGACCTACCATTA
TGGAAGGGAATGGGGCACCTGGTGATTACAACAATTTGATGAGAAGATGT
TGGGAACAAGATCCCGAGGAGAGATGTCAAATCAAAGATATCAACAAAAC
TGTTCACAAACTCAATCGAGATTTTGGAATGGTAAAGGAACAATCGTTAC
CTTTTTCTTGACTGCCCTTGCGTCGCTGGAGTGGTCGGCCTCAAAATGCC
AAGATACTGTTTATTCGGGGATACAGTGAATTATGCGAGTCGTATGGAAT
CCAGTGGATTGGCATTGAGAATACACGTTAGTCCTGAGTGTAAAGAAATC
CTGGATTTGTTGAGTGGCTATGAGCTGGAGGAGCGTGGACCGGTCCCTAT
GAAGGTTGAGACTATAGGGGATGCTTACATGGTCGTCAGCGGTTTGCCTG
TTCGAAATGGTTCGCGTCACGCAGGCGAAATCGCTACAATGTCTCTCGAC
CTCTTGTCTTCCGTACGAACATTCAGAGTGAAACATAAACCCGAATTACA
GATGCAACTCCGAATCGGATTACACACAGGACCGTAGCAAACAAATTGAA
AGAAGGACAACCGGTATTAGCGGAACAATTCGATTCAGTGACCATTTTCT
TTTCTGATATTGTTGGCTTCACAGCATTATGTTCAGAAAGTACTCCAATA
CAGGTGGTCGAAATGTTGAATGATCTATACAGTTGTTTTGATAATATCAT
CGACTCGCATGATGTTTACAAGGAAAGGATCCTTGATAGACCATATGTTA
ATGATGATGGAAAAATATACAAACAACTTGGAAGATATTGTTGCCGATCG
AACTCGACAACTAGAAGAAGAAAAAATCAAAACAGAAACACTTTTGTACA
AAATGCTACCCGTGAAATGGTGCGATCTAAGGGAGCCAATGAGAAACCGT
TTAGACCTACCATTATGGAAGGGAATGGGGCACCTGGTGATTACAACAAT
TTGATGAGAAGATGTTGGGAACAAGATCCCGAGGAGAGATGTCAAATCAA
AGATATCAACAAAACTGTTCACAAACTCAATCGAGATTTTGGAATGGTAA
AGGAACAATCGTTACCTTTTTCTTGACTGCCCTTGCGTCGCTGGAGTGGT
CGGCCTCAAAATGCCAAGATACTGTTTATTCGGGGATACAGTGAATTATG
CGAGTCGTATGGAATCCAGTGGATTGGCATTGAGAATACACGTTAGTCCT
GAGTGTAAAGAAATCCTGGATTTGTTGAGTGGCTATGAGCTGGAGGAGCG
TGGACCGGTCCCTATGAAGGTTGAGACTATAGGGGATGCTTACATGGTCG
TCAGCGGTTTGCCTGTTCGAAATGGTTCGCGTCACGCAGGCGAAATCGCT
ACAATGTCTCTCGACCTCTTGTCTTCCGTACGAACATTCAGAGTGAAACA
TAAACCCGAATTACAGATGCAACTCCGAATCGGATTACACACAGGACCGT
AGCAAACAAATTGAAAGAAGGACAACCGGTATTAGCGGAACAATTCGATT
CAGTGACCATTTTCTTTTCTGATATTGTTGGCTTCACAGCATTATGTTCA
GAAAGTACTCCAATACAGGTGGTCGAAATGTTGAATGATCTATACAGTTG
TTTTGATAATATCATCGACTCGCATGATGTTTACAAGGAAAGGATCCTTG
ATAGACCATATGTTAATGATGATGGAAAAATATACAAACAACTTGGAAGA
TATTGTTGCCGATCGAACTCGACAACTAGAAGAAGAAAAAATCAAAACAG
AAACACTTTTGTACAAAATGCTACCCGTGAAATGGTGCGATCTAAGGGAG
CCAATGAGAAACCGTTTAGACCTACCATTATGGAAGGGAATGGGGCACCT
GGTGATTACAACAATTTGATGAGAAGATGTTGGGAACAAGATCCCGAGGA
GAGATGTCAAATCAAAGATATCAACAAAACTGTTCACAAACTCAATCGAG
ATTTTGGAATGGTAAAGGAACAATCGTTACCTTTTTCTTGACTGCCCTTG
CGTCGCTGGAGTGGTCGGCCTCAAAATGCCAAGATACTGTTTATTCGGGG
ATACAGTGAATTATGCGAGTCGTATGGAATCCAGTGGATTGGCATTGAGA
ATACACGTTAGTCCTGAGTGTAAAGAAATCCTGGATTTGTTGAGTGGCTA
TGAGCTGGAGGAGCGTGGACCGGTCCCTATGAAGGTTGAGACTATAGGGG
ATGCTTACATGGTCGTCAGCGGTTTGCCTGTTCGAAATGGTTCGCGTCAC
GCAGGCGAAATCGCTACAATGTCTCTCGACCTCTTGTCTTCCGTACGAAC
ATTCAGAGTGAAACATAAACCCGAATTACAGATGCAACTCCGAATCGGAT
TACACACAGGACCGTAGCAAACAAATTGAAAGAAGGACAACCGGTATTAG
CGGAACAATTCGATTCAGTGACCATTTTCTTTTCTGATATTGTTGGCTTC
ACAGCATTATGTTCAGAAAGTACTCCAATACAGGTGGTCGAAATGTTGAA
TGATCTATACAGTTGTTTTGATAATATCATCGACTCGCATGATGTTTACA
AGGAAAGGATCCTTGATAGACCATATGTTAATGATGATGGAAAAATATAC
AAACAACTTGGAAGATATTGTTGCCGATCGAACTCGACAACTAGAAGAAG
AAAAAATCAAAACAGAAACACTTTTGTACAAAATGCTACCCGTGAAATGG
TGCGATCTAAGGGAGCCAATGAGAAACCGTTTAGACCTACCATTATGGAA
GGGAATGGGGCACCTGGTGATTACAACAATTTGATGAGAAGATGTTGGGA
ACAAGATCCCGAGGAGAGATGTCAAATCAAAGATATCAACAAAACTGTTC
ACAAACTCAATCGAGATTTTGGAATGGTAAAGGAACAATCGTTACCTTTT
TCTTGACTGCCCTTGCGTCGCTGGAGTGGTCGGCCTCAAAATGCCAAGAT
ACTGTTTATTCGGGGATACAGTGAATTATGCGAGTCGTATGGAATCCAGT
GGATTGGCATTGAGAATACACGTTAGTCCTGAGTGTAAAGAAATCCTGGA
TTTGTTGAGTGGCTATGAGCTGGAGGAGCGTGGACCGGTCCCTATGAAGG
TTGAGACTATAGGGGATGCTTACATGGTCGTCAGCGGTTTGCCTGTTCGA
AATGGTTCGCGTCACGCAGGCGAAATCGCTACAATGTCTCTCGACCTCTT
GTCTTCCGTACGAACATTCAGAGTGAAACATAAACCCGAATTACAGATGC
AACTCCGAATCGGATTACACACAGGACCGTAGCAAACAAATTGAAAGAAG
GACAACCGGTATTAGCGGAACAATTCGATTCAGTGACCATTTTCTTTTCT
GATATTGTTGGCTTCACAGCATTATGTTCAGAAAGTACTCCAATACAGGT
GGTCGAAATGTTGAATGATCTATACAGTTGTTTTGATAATATCATCGACT
CGCATGATGTTTACAAGGAAAGGATCCTTGATAGACCATATGTTAATGAT
GATGGAAAAATATACAAACAACTTGGAAGATATTGTTGCCGATCGAACTC
GACAACTAGAAGAAGAAAAAATCAAAACAGAAACACTTTTGTACAAAATG
CTACCCGTGAAATGGTGCGATCTAAGGGAGCCAATGAGAAACCGTTTAGA
CCTACCATTATGGAAGGGAATGGGGCACCTGGTGATTACAACAATTTGAT
GAGAAGATGTTGGGAACAAGATCCCGAGGAGAGATGTCAAATCAAAGATA
TCAACAAAACTGTTCACAAACTCAATCGAGATTTTGGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022163XLOC_022163Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037386-proteinTCONS_00037386-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037386-exon-sc0001621-1575043694:4496..4679TCONS_00037386-exon-sc0001621-1575043694:4496..4679Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1575043694:3223..3363TCONS_00037386-exon-sc0001621-1575043694:3223..3363Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1575043694:2423..2615TCONS_00037386-exon-sc0001621-1575043694:2423..2615Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1575043694:1726..1900TCONS_00037386-exon-sc0001621-1575043694:1726..1900Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1575043694:1099..1289TCONS_00037386-exon-sc0001621-1575043694:1099..1289Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1575043694:405..439TCONS_00037386-exon-sc0001621-1575043694:405..439Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1510915933:4496..4679TCONS_00037386-exon-sc0001621-1510915933:4496..4679Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1510915933:3223..3363TCONS_00037386-exon-sc0001621-1510915933:3223..3363Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1510915933:2423..2615TCONS_00037386-exon-sc0001621-1510915933:2423..2615Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1510915933:1726..1900TCONS_00037386-exon-sc0001621-1510915933:1726..1900Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1510915933:1099..1289TCONS_00037386-exon-sc0001621-1510915933:1099..1289Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1510915933:405..439TCONS_00037386-exon-sc0001621-1510915933:405..439Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1491911889:4496..4679TCONS_00037386-exon-sc0001621-1491911889:4496..4679Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1491911889:3223..3363TCONS_00037386-exon-sc0001621-1491911889:3223..3363Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1491911889:2423..2615TCONS_00037386-exon-sc0001621-1491911889:2423..2615Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1491911889:1726..1900TCONS_00037386-exon-sc0001621-1491911889:1726..1900Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1491911889:1099..1289TCONS_00037386-exon-sc0001621-1491911889:1099..1289Clytia hemisphaericaexon
TCONS_00037386-exon-sc0001621-1491911889:405..439TCONS_00037386-exon-sc0001621-1491911889:405..439Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001621supercontigsc0001621:405..4679 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0673855	0	0	0	0.113675	0	0	0.0332788	0.465029	0.558714	0.216198	0.105817	0.243375	0.801419	1.12795	0.940354	1.92096	1.76998	0.595166	1.00647	0.580655	0.966913	0	0	0.0554613	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001054A/G_cyclase
IPR011645HNOB_dom_associated
IPR018297A/G_cyclase_CS
IPR029787Nucleotide_cyclase
Vocabulary: Biological Process
TermDefinition
GO:0009190cyclic nucleotide biosynthetic process
GO:0035556intracellular signal transduction
GO:0006182cGMP biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016849phosphorus-oxygen lyase activity
GO:0004383guanylate cyclase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006182 cGMP biosynthetic process
biological_process GO:0009190 cyclic nucleotide biosynthetic process
biological_process GO:0035556 intracellular signal transduction
molecular_function GO:0004383 guanylate cyclase activity
molecular_function GO:0016849 phosphorus-oxygen lyase activity
Blast
[Close]
BLAST of TCONS_00037386 vs. Swiss-Prot (Human)
Match: ANPRA (Atrial natriuretic peptide receptor 1 OS=Homo sapiens GN=NPR1 PE=1 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 2.526e-110
Identity = 176/301 (58.47%), Postives = 229/301 (76.08%), Query Frame = 3 
Query:   12 RSKGANEKPFRPTIMEGNGAPGDYNNLMRRCWEQDPEERCQIKDINKTVHKLNRDFGMKGSLIDHMLMMMEKYTNNLEDIVADRTRQXXXXXXXXXXXXYKMLPVTVANKLKEGQPVLAEQFDSVTIFFSDIVGFTALCSESTPIQVVEMLNDLYSCFDNIIDSHDVYKVETIGDAYMVVSGLPVRNGSRHAGEIATMSLDLLSSVRTFRVKHKPELQMQLRIGLHTGPCVAGVVGLKMPRYCLFGDTVNYASRMESSGLALRIHVSPECKEILDLLSGYELEERGPVPMKGKGTIVTFFL 914
            R     + PFRP++   +    +   LM+RCW +DP+ER   + I  T+ K NR+     +++D++L  ME+Y NNLE++V +RT+   EEK K E LLY++LP +VA +LK G+ V AE FDSVTI+FSDIVGFTAL +ESTP+QVV +LNDLY+CFD +ID+ DVYKVETIGDAYMVVSGLPVRNG  HA E+A M+L LL +VR+FR++H+P+ Q++LRIG+HTGP  AGVVGLKMPRYCLFGDTVN ASRMES+G AL+IH+S E K +L+   G+ELE RG V MKGKG + T++L
Sbjct:  754 RVTRGEQPPFRPSLALQSHLE-ELGLLMQRCWAEDPQERPPFQQIRLTLRKFNRE--NSSNILDNLLSRMEQYANNLEELVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLYTCFDAVIDNFDVYKVETIGDAYMVVSGLPVRNGRLHACEVARMALALLDAVRSFRIRHRPQEQLRLRIGIHTGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGEALKIHLSSETKAVLEEFGGFELELRGDVEMKGKGKVRTYWL 1051
The following BLAST results are available for this feature:
BLAST of TCONS_00037386 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANPRA2.526e-11058.47Atrial natriuretic peptide receptor 1 OS=Homo sapi... [more]
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