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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037328 ID=TCONS_00037328|Name=TCONS_00037328|organism=Clytia hemisphaerica|type=transcript|length=1209bp
GTCATCTTGGCCAATAGTATGACATGAGTATTTTGCATCATAGCAATCGT
TATATTCATTGTTTGGGTCCAAAGCCACGTCAAAGTCGTCTTGATATCGT
AACTGGTTGTTCCTGTTGTTAATTCTGGAACGATGTTTTCTTGCTGCCTC
CCTACTTTGTCTATTACGTAtcatattgattgattgatttctgTTGAAAT
TGGTTGTTGCTGGAAGGGCTGGAAATCTTGGAGTAGTTGATCTTTGTTGC
TGCCCTGGTAGTCTAAACTGCACTTGTCTGTGTACTGGTGTTTGAATTCG
AACTGGCCATCTTTGGCTCTGAAATGGTGCATTTCCTGGTCCGTTTCTGT
TAGGATATCGTCGAGGGTTTGTATCTCGGCCTCCATTTCTGCAGTCTCGT
GCAAAGTGTCCGTACTTTCCACAGTTGTAGCAACCATCTTGGCGGAAGGA
TCCTTGCTTATTCTGAGAAATTGGTCTTTGGTGACGATTATCTCCTGATT
CTAGTTTTGATAGTCTTTGCTTAACTCTTTGTATCTCATTAGTACTGTCA
TTCtttgtaaaatttattttctggttACTTGTTTTACTCTCCGCTAGATT
CTTTGCTAATGAGCTGAGGACTGGTATCAGTTTATCAACTTCGCTAGACT
TTTCTTCTTCTGATGTAGAAATCAAGGCTGATTCTTTTGCTAGCGCAGCT
GTGTATGCTTCTTCTAAAGTCTCTGGAGTTTGGGTtataacatgtttttt
tatctttttaggtAGGCCTTCCATAAAGATTTGTAGTATATCATCGTCAC
TAACTTTAAGTTTCTTTGCTTCGTTTTGGATTGCTCGCTTGAATTCTTGA
ATGGTTTCGCTGTCTTTCTTTTTACGTCGAGTGAGTTGCTGTCTCTTATA
GAATTTGTGATTGACTGGATTGTATTCTGTAGTAAATCTATCTTTAACTG
TGTTAAAGTCATCCCTTACTTCTGCCTCTAGTCCATTGTAGAATCTTAAC
GGTTCCTGGCCTAAGAAGCTTGAAAAAAGTACTGATTTCTGACCATCGGC
AACCCCATTGAAGTCACAATACTTGTCaaactgatttaaaaaatcattta
tatCATAATTTTCCTCGCCTTTAAATTCCTTGGGCTCTTTTAATCTTACT
TTTCGATTATCCTTTAAGAGTGTTTCCATTCTCGTGTCTGTTGCCTGTCT
GTCTGCGGC Run BLAST on NCBI protein sequence of TCONS_00037328-protein >TCONS_00037328-protein ID=TCONS_00037328-protein|Name=TCONS_00037328-protein|organism=Clytia hemisphaerica|type=polypeptide|length=403bp
AADRQATDTRMETLLKDNRKVRLKEPKEFKGEENYDINDFLNQFDKYCDF
NGVADGQKSVLFSSFLGQEPLRFYNGLEAEVRDDFNTVKDRFTTEYNPVN
HKFYKRQQLTRRKKKDSETIQEFKRAIQNEAKKLKVSDDDILQIFMEGLP
KKIKKHVITQTPETLEEAYTAALAKESALISTSEEEKSSEVDKLIPVLSS
LAKNLAESKTSNQKINFTKNDSTNEIQRVKQRLSKLESGDNRHQRPISQN
KQGSFRQDGCYNCGKYGHFARDCRNGGRDTNPRRYPNRNGPGNAPFQSQR
WPVRIQTPVHRQVQFRLPGQQQRSTTPRFPALPATTNFNRNQSINMIRNR
QSREAARKHRSRINNRNNQLRYQDDFDVALDPNNEYNDCYDAKYSCHTIG
QDD Run BLAST on NCBI transcript from alignment at sc0001613:27578..28786 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037328 ID=TCONS_00037328|Name=TCONS_00037328|organism=Clytia hemisphaerica|type=transcript|length=1209bp|location=Sequence derived from alignment at sc0001613:27578..28786 (Clytia hemisphaerica)
GCCGCAGACAGACAGGCAACAGACACGAGAATGGAAACACTCTTAAAGGA
TAATCGAAAAGTAAGATTAAAAGAGCCCAAGGAATTTAAAGGCGAGGAAA
ATTATGatataaatgattttttaaatcagtttGACAAGTATTGTGACTTC
AATGGGGTTGCCGATGGTCAGAAATCAGTACTTTTTTCAAGCTTCTTAGG
CCAGGAACCGTTAAGATTCTACAATGGACTAGAGGCAGAAGTAAGGGATG
ACTTTAACACAGTTAAAGATAGATTTACTACAGAATACAATCCAGTCAAT
CACAAATTCTATAAGAGACAGCAACTCACTCGACGTAAAAAGAAAGACAG
CGAAACCATTCAAGAATTCAAGCGAGCAATCCAAAACGAAGCAAAGAAAC
TTAAAGTTAGTGACGATGATATACTACAAATCTTTATGGAAGGCCTacct
aaaaagataaaaaaacatgttataACCCAAACTCCAGAGACTTTAGAAGA
AGCATACACAGCTGCGCTAGCAAAAGAATCAGCCTTGATTTCTACATCAG
AAGAAGAAAAGTCTAGCGAAGTTGATAAACTGATACCAGTCCTCAGCTCA
TTAGCAAAGAATCTAGCGGAGAGTAAAACAAGTaaccagaaaataaattt
tacaaaGAATGACAGTACTAATGAGATACAAAGAGTTAAGCAAAGACTAT
CAAAACTAGAATCAGGAGATAATCGTCACCAAAGACCAATTTCTCAGAAT
AAGCAAGGATCCTTCCGCCAAGATGGTTGCTACAACTGTGGAAAGTACGG
ACACTTTGCACGAGACTGCAGAAATGGAGGCCGAGATACAAACCCTCGAC
GATATCCTAACAGAAACGGACCAGGAAATGCACCATTTCAGAGCCAAAGA
TGGCCAGTTCGAATTCAAACACCAGTACACAGACAAGTGCAGTTTAGACT
ACCAGGGCAGCAACAAAGATCAACTACTCCAAGATTTCCAGCCCTTCCAG
CAACAACCAATTTCAAcagaaatcaatcaatcaatatgaTACGTAATAGA
CAAAGTAGGGAGGCAGCAAGAAAACATCGTTCCAGAATTAACAACAGGAA
CAACCAGTTACGATATCAAGACGACTTTGACGTGGCTTTGGACCCAAACA
ATGAATATAACGATTGCTATGATGCAAAATACTCATGTCATACTATTGGC
CAAGATGAC Coding sequence (CDS) from alignment at sc0001613:27578..28786 >TCONS_00037328 ID=TCONS_00037328|Name=TCONS_00037328|organism=Clytia hemisphaerica|type=CDS|length=1209bp|location=Sequence derived from alignment at sc0001613:27578..28786 (Clytia hemisphaerica)
GCCGCAGACAGACAGGCAACAGACACGAGAATGGAAACACTCTTAAAGGA
TAATCGAAAAGTAAGATTAAAAGAGCCCAAGGAATTTAAAGGCGAGGAAA
ATTATGatataaatgattttttaaatcagtttGACAAGTATTGTGACTTC
AATGGGGTTGCCGATGGTCAGAAATCAGTACTTTTTTCAAGCTTCTTAGG
CCAGGAACCGTTAAGATTCTACAATGGACTAGAGGCAGAAGTAAGGGATG
ACTTTAACACAGTTAAAGATAGATTTACTACAGAATACAATCCAGTCAAT
CACAAATTCTATAAGAGACAGCAACTCACTCGACGTAAAAAGAAAGACAG
CGAAACCATTCAAGAATTCAAGCGAGCAATCCAAAACGAAGCAAAGAAAC
TTAAAGTTAGTGACGATGATATACTACAAATCTTTATGGAAGGCCTacct
aaaaagataaaaaaacatgttataACCCAAACTCCAGAGACTTTAGAAGA
AGCATACACAGCTGCGCTAGCAAAAGAATCAGCCTTGATTTCTACATCAG
AAGAAGAAAAGTCTAGCGAAGTTGATAAACTGATACCAGTCCTCAGCTCA
TTAGCAAAGAATCTAGCGGAGAGTAAAACAAGTaaccagaaaataaattt
tacaaaGAATGACAGTACTAATGAGATACAAAGAGTTAAGCAAAGACTAT
CAAAACTAGAATCAGGAGATAATCGTCACCAAAGACCAATTTCTCAGAAT
AAGCAAGGATCCTTCCGCCAAGATGGTTGCTACAACTGTGGAAAGTACGG
ACACTTTGCACGAGACTGCAGAAATGGAGGCCGAGATACAAACCCTCGAC
GATATCCTAACAGAAACGGACCAGGAAATGCACCATTTCAGAGCCAAAGA
TGGCCAGTTCGAATTCAAACACCAGTACACAGACAAGTGCAGTTTAGACT
ACCAGGGCAGCAACAAAGATCAACTACTCCAAGATTTCCAGCCCTTCCAG
CAACAACCAATTTCAAcagaaatcaatcaatcaatatgaTACGTAATAGA
CAAAGTAGGGAGGCAGCAAGAAAACATCGTTCCAGAATTAACAACAGGAA
CAACCAGTTACGATATCAAGACGACTTTGACGTGGCTTTGGACCCAAACA
ATGAATATAACGATTGCTATGATGCAAAATACTCATGTCATACTATTGGC
CAAGATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037328-exon-sc0001613-1491911889:27578..28786 | TCONS_00037328-exon-sc0001613-1491911889:27578..28786 | Clytia hemisphaerica | exon |
| TCONS_00037328-exon-sc0001613-1510915933:27578..28786 | TCONS_00037328-exon-sc0001613-1510915933:27578..28786 | Clytia hemisphaerica | exon |
| TCONS_00037328-exon-sc0001613-1575043694:27578..28786 | TCONS_00037328-exon-sc0001613-1575043694:27578..28786 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001613 | supercontig | sc0001613:27578..28786 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
Blast
The following BLAST results are available for this feature:
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