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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037299 ID=TCONS_00037299|Name=TCONS_00037299|organism=Clytia hemisphaerica|type=transcript|length=169bp
AGGAAAGAGAAGTCCCCGTTTTACAGTTTTTATTTGTTATTTAAACTTGT
TCTTTTCGCACTGGGAGCTATAATTATTAAGCATATGCACAATCTTCCGA
TTATTGATGTTTACAAAAGTCTTTGAATTCAACAAAATGgaTCGAATCCG
AGGAAAATACGCAGATAAC Run BLAST on NCBI transcript from alignment at sc0001611:34588..36990- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037299 ID=TCONS_00037299|Name=TCONS_00037299|organism=Clytia hemisphaerica|type=transcript|length=2403bp|location=Sequence derived from alignment at sc0001611:34588..36990- (Clytia hemisphaerica)
AGGAAAGAGAAGTCCCCGTTTTACAGTTTTTATTTGTTATTTAAACTTGT
TCTTTTCGCACTGGGAGCTATAATTATTAAGCATATGCACAATCTTCCGA
TTATTGATGTTTACAAAAGTCTTTGAATTCAACAAAATGGTATGTGAATT
ATTAAAACCTTTGCAAAAAGAACACACAAGAGAGATACACAATACAGGCT
GTAGGCTTGGGTTGTTTTGTTTTTACCAAAGTCAGCAATTTTTTTTTTCA
ACACTCTTTAATTATGCGAATTAATTATTGTGTAATTATTTTGAAAATGA
TTGAAGTGTCAAAAAAAGTGATAGTTGAAAAATTCAAACTTCTCTACTGG
ACCTGGCTACTATTTCAGCTATCAGTGGTAAGATAGTGAAATATTAAGCA
GTGTTTCCTGGCTAGGCATTCCTATGTTTAGCAATAAAGATATAGAAATT
TTAAGTTGTGTAAAGGACATTTTGGTACTGTTACTTTACTGAAGCTTAAA
AAGCTAAACCAGGTTGTTGCATGCAAAACATTTGGAGAAACATTTTCTAA
AAAGGAAGTTTTATTCGAGGTTATCACTGATTGACTGTCGCAAGGTCAAA
GCTATTTTCCTTTTGTGTTTAGAATGCTTAGTGAAAAACGCAATTGTGAT
GGAATATTTTGGTGATAAACTGGACGTGGAAAATACAATGCCTAATTTGA
AAGCAAAGTTCAAAGCCGAGTCTCTTAAGAATGATCCAGTCAAATCCCCT
GATTTCAAAAAATCCTTTTTTACGTGCTCAGCGCTGTTAATACCCACACA
TCTTTAAAATCTTGCACAACGATATTAAGGCTGATAATTTCATCTATGCA
AAATATTGTGTTAAACTAATCGATTTTGGCAAGGCAACATTGTCTGTGGA
AACAAGGTTTGGAACATATATCAAGGAAGTGAAACCGCAGAGAGATATAA
TACATATCATCGCCATTTGGCTAATGAGTTGAAGCAAAGTGAAATCACAG
ATGTCTATTCCGTCGGATATATGTTTAAAAATATTTATGCAATTATTAAA
TGCAAAGATGTTATTTCTCTTGAAAAGAGTATGGAAATTAGAAAACCAGA
TTTCAGGATATCGGTTAAGAAAGCATTAACTGCTTTAGAAAAAATTGTTA
TTTTATTAAAGTAAACAGTTATGCTTGATAGTTTCATAGGATACATACGA
AGATTTTTCTACGTTATTGCAGATAAGTAAATATGCATGTGAAATTTTAC
AAACACCAGTTCCTTTAATTTTGTCAGATTTTTTATTAAAAAAGCTGATC
ATTCAGATTAATCTGACGACTTTTCATGCAGTACCATTTTTCTTTTTTCA
GATCAATATCTAACTTGAAGGATCTTTTTCAAAAAAAACTCGAAGAGATT
GAAGAAAAGCTAGGAAGGCAAGCGATTTCGATTGAACAAATGTCCAAAAT
ACTTATGGACTTGAAAGATACAAATACAAAAGCTTTGGAAGCAACCCCCA
AAGGAAAGAAGATTATAGTCCAGCTTAGTGTTAAGGTAATTAATTCATAT
ATATTAATTAAAAGTTGATACCTTAAGGGAATTAATTTAATTTTCGCGGC
ACTTATTTTCGCGACTAACTTCGACTGTAAATTTTTGCGAGGATTTTATT
CCGCGAATTTGTGATTTTTTTCAGATTTTCACATCAATTACGAGATTTTG
TGTAAATAGTAGTCTCTATAAGTCGAATGGCTACGAGGAATGAGCATTTA
TTCAAATTATAGAGACTTTCGAGTGATGAAGACTCGTTTAAAAGAGCTTC
TTAGCTGGAAGAATTTTTAGCGCAAAAAAACTAAATTTTAGCGAATTTAG
CGAGAGATGAGAGTTTGAAAATTTTCGCGAAGGACTATATTTCGCGAAAT
ATAATCCCCGCGAAAATTTATACCCTTAAGGTATTATTTAAACCTTGTCA
AATAACCAAGGCTTCATTGAAAAAACTTCCTATTAGTTCCTAGCTGGTGT
AGAAAATTATAAATAGACATTATACTATTAATTTAGCATACTTTCAATGA
AGCTTGGTAAAAGATACGAGCCTGGAAGTTTTAAGTTTTCAATCATTGAT
ATCATTTTTATCTGATTATTAACATAAAAACGATTACAGTGACATTAAGG
ATGAATCACGATTTCTCTTATTGTTTAGAAAAGGTTGCGGCATTTGTACA
AACTATTACCAGAAGATGAAAAGTGGAACTTTGATGAATGGTATAATATT
TTCACCCTCGTTACTTTCCAAGCAATTTTTTCTTAAGCACAACATTTATC
CATGCATTTTTTGCTACTTAAAAAAAAAAATTACAAGCAAAAGCTTAACT
TTAAATCTTTTTTCAAAATTCAGGATCGAATCCGAGGAAAATACGCAGAT
AAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037299-exon-sc0001611-1575043694:36852..36990 | TCONS_00037299-exon-sc0001611-1575043694:36852..36990 | Clytia hemisphaerica | exon |
| TCONS_00037299-exon-sc0001611-1575043694:34588..34617 | TCONS_00037299-exon-sc0001611-1575043694:34588..34617 | Clytia hemisphaerica | exon |
| TCONS_00037299-exon-sc0001611-1510915933:36852..36990 | TCONS_00037299-exon-sc0001611-1510915933:36852..36990 | Clytia hemisphaerica | exon |
| TCONS_00037299-exon-sc0001611-1510915933:34588..34617 | TCONS_00037299-exon-sc0001611-1510915933:34588..34617 | Clytia hemisphaerica | exon |
| TCONS_00037299-exon-sc0001611-1491911889:36852..36990 | TCONS_00037299-exon-sc0001611-1491911889:36852..36990 | Clytia hemisphaerica | exon |
| TCONS_00037299-exon-sc0001611-1491911889:34588..34617 | TCONS_00037299-exon-sc0001611-1491911889:34588..34617 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001611 | supercontig | sc0001611:34588..36990 - |
Blast
The following BLAST results are available for this feature:
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