TCONS_00037298 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037298
Unique NameTCONS_00037298
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length122

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037298 ID=TCONS_00037298|Name=TCONS_00037298|organism=Clytia hemisphaerica|type=transcript|length=122bp
ACTTGGAATTGCTTCATTCTCGAGCAAACTTGAGCTTACCTCATCTTGAC
GGTTCTTAATTTTCATGACCTCAAAACAGTCATCTTTTTGCTTTGAACAA
TGTTCAATGGTGACTGctttct
Run BLAST on NCBI

transcript from alignment at sc0001611:12422..12600+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037298 ID=TCONS_00037298|Name=TCONS_00037298|organism=Clytia hemisphaerica|type=transcript|length=179bp|location=Sequence derived from alignment at sc0001611:12422..12600+ (Clytia hemisphaerica)
ACTTGGAATTGCTTCATTCTCGAGCATACTTGAGCTTGTCTCATTCTTGT
GCACCAAACTTGAGCTTGCCTCGTTCTTGCACAAACTTGAGCTTACCTCA
TCTTGACGGTTCTTAATTTTCATGACCTCAAAACAGTCATCTTTTTGCTT
TGAACAATGTTCAATGGTGACTGctttct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022086XLOC_022086Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037298-exon-sc0001611-1491911889:12422..12446TCONS_00037298-exon-sc0001611-1491911889:12422..12446Clytia hemisphaericaexon
TCONS_00037298-exon-sc0001611-1510915933:12422..12446TCONS_00037298-exon-sc0001611-1510915933:12422..12446Clytia hemisphaericaexon
TCONS_00037298-exon-sc0001611-1575043694:12422..12446TCONS_00037298-exon-sc0001611-1575043694:12422..12446Clytia hemisphaericaexon
TCONS_00037298-exon-sc0001611-1491911889:12504..12600TCONS_00037298-exon-sc0001611-1491911889:12504..12600Clytia hemisphaericaexon
TCONS_00037298-exon-sc0001611-1510915933:12504..12600TCONS_00037298-exon-sc0001611-1510915933:12504..12600Clytia hemisphaericaexon
TCONS_00037298-exon-sc0001611-1575043694:12504..12600TCONS_00037298-exon-sc0001611-1575043694:12504..12600Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001611supercontigsc0001611:12422..12600 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037298 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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