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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037292 ID=TCONS_00037292|Name=TCONS_00037292|organism=Clytia hemisphaerica|type=transcript|length=560bp
TACGAGTTATTGAAAATGGAATCAATGAAAGATAtagaatGTATCGTATA
TGACGACGCGTGTCACCTCAAAAAATATTCCATGAACCGAAGAGAAAAAT
CAGAGAAATTGGCTGACATGGATTATAGGTCTGATAGGtttcattttaaa
aaccatATCGATACTTGGTGCCGTGCAAATTGCAACCCAGATAACAGCGA
CTCGTTGAAAGATgTGAATACGGAAATATGCGAACAATTGTTTTCATGGT
TCTCGAAATATAAGCACATGACGAAACATATGAATCGGGAAAGGTACACT
TTCATGGTGTTATATTTGATGCATTTACATAATGAGAGGATCACCAAGTA
ACTTTAACACAAAAgcaaaaaagcaaaatattGATTAAGCCTTAACTCCT
AACCCTCCTCCAATCATGACTAGCTGGTagttgaaatatttattttacac
gtttttttataaagaactttAACCTTCCTCTAAGGTTAGAGCTGCTAatt
ttacctcaacatacaaagttctaaaattatagagcttggtacaactagag
aatgaaagtg Run BLAST on NCBI transcript from alignment at sc0001610:36898..38778+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037292 ID=TCONS_00037292|Name=TCONS_00037292|organism=Clytia hemisphaerica|type=transcript|length=1881bp|location=Sequence derived from alignment at sc0001610:36898..38778+ (Clytia hemisphaerica)
TACGAGTTATTGAAAATGGAATCAATGAAAGATAtaggtaaatattttga
aaattagtagTACTAAAAACACATGTGCCTTGGCAAATAAAAAAACTCAA
TTCAAGTGTATTCCAAAAAGGTAAAACTCTTTATAGCCGGTCTACTTTTG
GGTGGTATtgttaaattttataaaattaaaCTGTTTTAAAGTTCATTGAA
GCcctgttttcttttattttgttgaccCAGCGCGCAGCGGAATAAGCTTT
TTAAAAGGAAATGGTCGATAGCACGCTATTATGAATTGACCATGTTAAAA
AGCGTTTACTATTTTGCCAACAAGGTACCGGTTGTAAAAAATGAACCTAA
TAAGCTCAGGGCTGATTTACCatgttttgtaaattttgattttttagaat
GTATCGTATATGACGACGCGTGTCACCTCAAAAAATATTCCATGAACCGA
AGAGAAAAATCAGAGAAATTGGCTGACATGGATTATAGGTCTGATAGGtt
tcattttaaaaaccatATCGATACTTGGTGCCGTGCAAATTGCAACCCAG
ATAACAGCGACTCGTTGAAAGATGTATGTAgcagagattttttttggtaa
aCTATTTGCGCTAAACAAATTTGTAAGAAATATATAATGAGTATATCGAG
GGTGATGAATTTTAATTGGTAAAAGGGTGGGTTTACATCAAGGGGAGAAT
CGATTAAAGAATTgaccattttgatttgttttgcacattgtgtcgacaGG
CTCATTTCCAGACTTCAGCAAAATAAGTTGAGACATCAATGTAAGGGTCA
GGACTTTCAGTAAAATGTACTGTAGGGTAGGTCTTCACTCCTCATAAGCT
GCACGAGGGTTCAATTTTGAAAGGCAATTTTTATGCCGACGTTAGACATT
TTTGTAAGGCATAATTAACTCTGTAAAtcatactttaggcgtagaaactt
tcacaagcagaaactttcgcgaggtcgaaaaatcgcgaaattcacaacat
ctactttcgcgaatttgaggaagaaatatttttcgcgagcattaactttc
gcgaatcattGGGAAAAAACAGAGAAATTTTAAGCGAAAATCGACTAAAA
AGTTACAAATGGTCCTTGAATCCAATAAAAACGGTTATTCTTTGACTGTG
AAAAGGCGTTAAAGGCTAGAAATATGCTAAAGACTTTATATTTATTACAA
TTTTGAAGTTTTgtagattttcaatttttcaaagaaaatttcgcAAACAT
AAACTTTCACAAATTACCctgtcaagaattttcaaagacatttactttcg
cgaaataggccaaaattcgcgaaactcgcgaaagtttctacgcgcgaaag
tttgtacgcctaaagtaattaaTTTTCGCTTTCTGattaatttgaaaagt
tattaaCTCCCATAAAAGAATTCGTAAAAGTGATTTTGAGCCTTTTGTTA
ATGTTCTGATTGTTATCGACAAAGGAAAGGTAATCGATTCTCCCTACAGA
TGTAAACCCACCTAAAggttattttctatttcaggTGAATACGGAAATAT
GCGAACAATTGTTTTCATGGTTCTCGAAATATAAGCACATGACGAAACAT
ATGAATCGGGAAAGGTACACTTTCATGGTGTTATATTTGATGCATTTACA
TAATGAGAGGATCACCAAGTAACTTTAACACAAAAgcaaaaaagcaaaat
attGATTAAGCCTTAACTCCTAACCCTCCTCCAATCATGACTAGCTGGTa
gttgaaatatttattttacacgtttttttataaagaactttAACCTTCCT
CTAAGGTTAGAGCTGCTAattttacctcaacatacaaagttctaaaatta
tagagcttggtacaactagagaatgaaagtg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037292-exon-sc0001610-1491911889:36898..36934 | TCONS_00037292-exon-sc0001610-1491911889:36898..36934 | Clytia hemisphaerica | exon |
| TCONS_00037292-exon-sc0001610-1510915933:36898..36934 | TCONS_00037292-exon-sc0001610-1510915933:36898..36934 | Clytia hemisphaerica | exon |
| TCONS_00037292-exon-sc0001610-1575043694:36898..36934 | TCONS_00037292-exon-sc0001610-1575043694:36898..36934 | Clytia hemisphaerica | exon |
| TCONS_00037292-exon-sc0001610-1491911889:37295..37470 | TCONS_00037292-exon-sc0001610-1491911889:37295..37470 | Clytia hemisphaerica | exon |
| TCONS_00037292-exon-sc0001610-1510915933:37295..37470 | TCONS_00037292-exon-sc0001610-1510915933:37295..37470 | Clytia hemisphaerica | exon |
| TCONS_00037292-exon-sc0001610-1575043694:37295..37470 | TCONS_00037292-exon-sc0001610-1575043694:37295..37470 | Clytia hemisphaerica | exon |
| TCONS_00037292-exon-sc0001610-1491911889:38432..38778 | TCONS_00037292-exon-sc0001610-1491911889:38432..38778 | Clytia hemisphaerica | exon |
| TCONS_00037292-exon-sc0001610-1510915933:38432..38778 | TCONS_00037292-exon-sc0001610-1510915933:38432..38778 | Clytia hemisphaerica | exon |
| TCONS_00037292-exon-sc0001610-1575043694:38432..38778 | TCONS_00037292-exon-sc0001610-1575043694:38432..38778 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001610 | supercontig | sc0001610:36898..38778 + |
Blast
The following BLAST results are available for this feature:
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