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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037217 ID=TCONS_00037217|Name=TCONS_00037217|organism=Clytia hemisphaerica|type=transcript|length=1502bp
ATGAAATTTTCGTGATTGATGAAATAGTAATGGATAAAGAATTCCATCGC
TCAAACAGACCATGATCGAtcgaaatttacaaaaattgaaTGGAGTAAGG
GCAGGGGCGGAATCGATAAACCCTCGATTAGCCCCTCTATACCTACCATC
AAATTTAGGGTAGCGGGCGACTTACGAGGGTTATTATTATAAATcacatt
tcattttcttttacatAATTCATTTTTTCTCCAGATAGCAATAACTCCAa
agccaaaaaaaatgaaagcgACAAGACAAAAGTGACAACTTCTTGATGAC
GTAAGCAAAAACAGTTGAAATTCATGCAAGCAACAAAAGTGTAAAGAGTG
AAAATTCTTGCTGAAAAATACCTTCAACCGATATGAtcgatttgaaaaat
aagaatggAAGGTCGACAGAAAAGTCAAACAGCCGTTGAAGGGCATTTAT
GATTTTTACTTAAGATTTATTCATTTTGCACGTGAAATTAGTAAATCCTA
TTTTTGTTTCAGGACTTCAACTGCAAATGTGGAAAACGATATTACGACCT
AAAAATGCTCAATAGACacataaaaacgcaaaaaacgaaaaatagcccaa
caaaacatgaaaaaaccgGTTAGTAATATTTTACAAATGCTTACGATAAT
TACAATTCTCCTCCTTTACATTGCTGTACTACAAACATGTTTACATGATA
CATGCATGCAACTTGGTATGGTATGCTGCTATACGTgacattgatttttt
ttgttatataGATGCCCGACTTCCAAGGCTCTACAAAAGGCTTTAAAGAA
GCAAAGATGACTATTTGGAGGTGAGATACTGTTAAAGGGGAACTCATTCG
ATTTCGTCAGCAGGAGGAGGGTAAGAATTTTATTTGGTTAAACTTTTTTG
GTTGCTACTTTATACGTCTATTAGATTTTTCAGGGTCCATGTCACGGGGC
AGGGGCAGGGgaccatttttttgcaaaacgaaaatattttggttgCGTGT
TCTTAGACTCTATATtcattgcccccccccctcaatTCATGGTGTGGGAc
ctgttgttttgattttgctcaACTATCGtgaatttcattttgttttttca
actTGTGAGGGCAGGTTGTAGTAATTTTTTGAACAATGAATTACACAATA
TTTAATGAAAAGCGAATTTCTCTGCAAAATATTTAACACAACAATGGATT
TTTAATTACTCTAATTTACTTTTGGAACGTAGAGTATCAAATCTAAGTTT
TGACATTAAACTTAAGACTGAGAATATAACCAAGAGGTCAGTGACCCTGG
AGGCAGTTTTTCAATCTTGGCCAAGCTAAATATTTTGATCTGAGTTAATT
TTTTAAGtagcattttcttgaaattcagTTCCATTTTTCAAGGACAAATG
GCTAGTATTTAACGTATTTGGTGTCacttttgtcaaattttcaaaaaatg
caggtGCTTCAAAATGTCTTTCATTGGGTTTTGACACAATTTTCAGGATA
AT Run BLAST on NCBI transcript from alignment at sc0001590:16254..17755 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037217 ID=TCONS_00037217|Name=TCONS_00037217|organism=Clytia hemisphaerica|type=transcript|length=1502bp|location=Sequence derived from alignment at sc0001590:16254..17755 (Clytia hemisphaerica)
ATTATCCTGAAAATTGTGTCAAAACCCAATGAAAGACATTTTGAAGCacc
tgcattttttgaaaatttgacaaaagtGACACCAAATACGTTAAATACTA
GCCATTTGTCCTTGAAAAATGGAActgaatttcaagaaaatgctaCTTAA
AAAATTAACTCAGATCAAAATATTTAGCTTGGCCAAGATTGAAAAACTGC
CTCCAGGGTCACTGACCTCTTGGTTATATTCTCAGTCTTAAGTTTAATGT
CAAAACTTAGATTTGATACTCTACGTTCCAAAAGTAAATTAGAGTAATTA
AAAATCCATTGTTGTGTTAAATATTTTGCAGAGAAATTCGCTTTTCATTA
AATATTGTGTAATTCATTGTTCAAAAAATTACTACAACCTGCCCTCACAa
gttgaaaaaacaaaatgaaattcaCGATAGTtgagcaaaatcaaaacaac
aggTCCCACACCATGAattgaggggggggggcaatgaATATAGAGTCTAA
GAACACGcaaccaaaatattttcgttttgcaaaaaaatggtcCCCTGCCC
CTGCCCCGTGACATGGACCCTGAAAAATCTAATAGACGTATAAAGTAGCA
ACCAAAAAAGTTTAACCAAATAAAATTCTTACCCTCCTCCTGCTGACGAA
ATCGAATGAGTTCCCCTTTAACAGTATCTCACCTCCAAATAGTCATCTTT
GCTTCTTTAAAGCCTTTTGTAGAGCCTTGGAAGTCGGGCATCtatataac
aaaaaaaatcaatgtcACGTATAGCAGCATACCATACCAAGTTGCATGCA
TGTATCATGTAAACATGTTTGTAGTACAGCAATGTAAAGGAGGAGAATTG
TAATTATCGTAAGCATTTGTAAAATATTACTAACcggttttttcatgttt
tgttgggctatttttcgttttttgcgtttttatgtGTCTATTGAGCATTT
TTAGGTCGTAATATCGTTTTCCACATTTGCAGTTGAAGTCCTGAAACAAA
AATAGGATTTACTAATTTCACGTGCAAAATGAATAAATCTTAAGTAAAAA
TCATAAATGCCCTTCAACGGCTGTTTGACTTTTCTGTCGACCTTccattc
ttatttttcaaatcgaTCATATCGGTTGAAGGTATTTTTCAGCAAGAATT
TTCACTCTTTACACTTTTGTTGCTTGCATGAATTTCAACTGTTTTTGCTT
ACGTCATCAAGAAGTTGTCACTTTTGTCTTGTcgctttcattttttttgg
cttTGGAGTTATTGCTATCTGGAGAAAAAATGAATTatgtaaaagaaaat
gaaatgtgATTTATAATAATAACCCTCGTAAGTCGCCCGCTACCCTAAAT
TTGATGGTAGGTATAGAGGGGCTAATCGAGGGTTTATCGATTCCGCCCCT
GCCCTTACTCCAttcaatttttgtaaatttcgaTCGATCATGGTCTGTTT
GAGCGATGGAATTCTTTATCCATTACTATTTCATCAATCACGAAAATTTC
AT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037217-exon-sc0001590-1491911889:16254..17755 | TCONS_00037217-exon-sc0001590-1491911889:16254..17755 | Clytia hemisphaerica | exon |
| TCONS_00037217-exon-sc0001590-1510915933:16254..17755 | TCONS_00037217-exon-sc0001590-1510915933:16254..17755 | Clytia hemisphaerica | exon |
| TCONS_00037217-exon-sc0001590-1575043694:16254..17755 | TCONS_00037217-exon-sc0001590-1575043694:16254..17755 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001590 | supercontig | sc0001590:16254..17755 . |
Blast
The following BLAST results are available for this feature:
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