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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036998 ID=TCONS_00036998|Name=TCONS_00036998|organism=Clytia hemisphaerica|type=transcript|length=1003bp
NAAACTCTCTCGAAAATTCAACTCAAACAAACCGTTAAGAAACAATTTAT
TGACTCCATGGCAAACTCCCTCCTACAAAAACCACTCCATGGCCAACATT
CCAGGCAACTCCAACAACCCCACATCGACCATACCAAATCAAACCTTTGG
CTCAAATCATCAACCCTTAAACGCTCCACCGAATCAACTATTTGCGCCAT
CCAGGAACAAGCAATCACCACCAATTACATCAAGAAGCATGTCCACCACA
CCACTAACGACGACTCCTGCCGTATTTGCCGATCATCCAAAGAAACCATC
CATCACATAGTTTCCGGTTGTACCGCCCTTGCCCCAACTAAATACCTGAA
AAGACATAACGACCTTGCCAAATACCTACACATTCTTCTCCTTCAAAAAC
ACCAACTAGACACCAACGACCACATATGGTACAATTACACACCTCCTCCA
GTGATCGAAAACCACCAAACCAAAATCCTTTGGGACTTCTCAATCCAAAC
AGATCATCACCTCCAACATAACAAACCGGACATCCTTATACTGCACAAAA
ACCAAAGGAGAGCCATAATCGTAGATATTGCCGTCCCCAACGACAGTAAT
ATTGCTAACAAACGAATCGAGAAAATAAGGAAATACACGGACCTCGCCAT
CGAGCTGAAAGCGATGTGGAATCTGGACAGGGTAGAGATCGTTCCCTTTG
TAATTGGTGCCACTGGTGTATTTTACaaagaatttgataaagacaTTGAG
AAACTTGAACTGAATGGTATGTTGAGGCATGAAATGTGCCAGAAAATTAT
ATTACTAGGTACTGCGCATATAGTCCGAGCATTTATGCAAATTCCGTAAA
ATTTCCGccaaattatttcttttctttcttttcattttttttttctaatc
tttttttcCAAGCCCGGGATCCACGTAAAGCAACTAGTATATATATTGCT
GAAAAGAGGAACCCATTTCCTTAAAGTCCAACCAATTCTCTCAGAAATCA
TTC Run BLAST on NCBI protein sequence of TCONS_00036998-protein >TCONS_00036998-protein ID=TCONS_00036998-protein|Name=TCONS_00036998-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
XTLSKIQLKQTVKKQFIDSMANSLLQKPLHGQHSRQLQQPHIDHTKSNLW
LKSSTLKRSTESTICAIQEQAITTNYIKKHVHHTTNDDSCRICRSSKETI
HHIVSGCTALAPTKYLKRHNDLAKYLHILLLQKHQLDTNDHIWYNYTPPP
VIENHQTKILWDFSIQTDHHLQHNKPDILILHKNQRRAIIVDIAVPNDSN
IANKRIEKIRKYTDLAIELKAMWNLDRVEIVPFVIGATGVFYKEFDKDIE
KLELNGMLRHEMCQKIILLGTAHIVRAFMQIP Run BLAST on NCBI transcript from alignment at sc0001550:48116..49118 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036998 ID=TCONS_00036998|Name=TCONS_00036998|organism=Clytia hemisphaerica|type=transcript|length=1003bp|location=Sequence derived from alignment at sc0001550:48116..49118 (Clytia hemisphaerica)
GAATGATTTCTGAGAGAATTGGTTGGACTTTAAGGAAATGGGTTCCTCTT
TTCAGCAATATATATACTAGTTGCTTTACGTGGATCCCGGGCTTGgaaaa
aaagattagaaaaaaaaaatgaaaagaaagaaaagaaataatttggCGGA
AATTTTACGGAATTTGCATAAATGCTCGGACTATATGCGCAGTACCTAGT
AATATAATTTTCTGGCACATTTCATGCCTCAACATACCATTCAGTTCAAG
TTTCTCAAtgtctttatcaaattctttGTAAAATACACCAGTGGCACCAA
TTACAAAGGGAACGATCTCTACCCTGTCCAGATTCCACATCGCTTTCAGC
TCGATGGCGAGGTCCGTGTATTTCCTTATTTTCTCGATTCGTTTGTTAGC
AATATTACTGTCGTTGGGGACGGCAATATCTACGATTATGGCTCTCCTTT
GGTTTTTGTGCAGTATAAGGATGTCCGGTTTGTTATGTTGGAGGTGATGA
TCTGTTTGGATTGAGAAGTCCCAAAGGATTTTGGTTTGGTGGTTTTCGAT
CACTGGAGGAGGTGTGTAATTGTACCATATGTGGTCGTTGGTGTCTAGTT
GGTGTTTTTGAAGGAGAAGAATGTGTAGGTATTTGGCAAGGTCGTTATGT
CTTTTCAGGTATTTAGTTGGGGCAAGGGCGGTACAACCGGAAACTATGTG
ATGGATGGTTTCTTTGGATGATCGGCAAATACGGCAGGAGTCGTCGTTAG
TGGTGTGGTGGACATGCTTCTTGATGTAATTGGTGGTGATTGCTTGTTCC
TGGATGGCGCAAATAGTTGATTCGGTGGAGCGTTTAAGGGTTGATGATTT
GAGCCAAAGGTTTGATTTGGTATGGTCGATGTGGGGTTGTTGGAGTTGCC
TGGAATGTTGGCCATGGAGTGGTTTTTGTAGGAGGGAGTTTGCCATGGAG
TCAATAAATTGTTTCTTAACGGTTTGTTTGAGTTGAATTTTCGAGAGAGT
TTN Coding sequence (CDS) from alignment at sc0001550:48116..49118 >TCONS_00036998 ID=TCONS_00036998|Name=TCONS_00036998|organism=Clytia hemisphaerica|type=CDS|length=849bp|location=Sequence derived from alignment at sc0001550:48116..49118 (Clytia hemisphaerica)
TTACGGAATTTGCATAAATGCTCGGACTATATGCGCAGTACCTAGTAATA
TAATTTTCTGGCACATTTCATGCCTCAACATACCATTCAGTTCAAGTTTC
TCAAtgtctttatcaaattctttGTAAAATACACCAGTGGCACCAATTAC
AAAGGGAACGATCTCTACCCTGTCCAGATTCCACATCGCTTTCAGCTCGA
TGGCGAGGTCCGTGTATTTCCTTATTTTCTCGATTCGTTTGTTAGCAATA
TTACTGTCGTTGGGGACGGCAATATCTACGATTATGGCTCTCCTTTGGTT
TTTGTGCAGTATAAGGATGTCCGGTTTGTTATGTTGGAGGTGATGATCTG
TTTGGATTGAGAAGTCCCAAAGGATTTTGGTTTGGTGGTTTTCGATCACT
GGAGGAGGTGTGTAATTGTACCATATGTGGTCGTTGGTGTCTAGTTGGTG
TTTTTGAAGGAGAAGAATGTGTAGGTATTTGGCAAGGTCGTTATGTCTTT
TCAGGTATTTAGTTGGGGCAAGGGCGGTACAACCGGAAACTATGTGATGG
ATGGTTTCTTTGGATGATCGGCAAATACGGCAGGAGTCGTCGTTAGTGGT
GTGGTGGACATGCTTCTTGATGTAATTGGTGGTGATTGCTTGTTCCTGGA
TGGCGCAAATAGTTGATTCGGTGGAGCGTTTAAGGGTTGATGATTTGAGC
CAAAGGTTTGATTTGGTATGGTCGATGTGGGGTTGTTGGAGTTGCCTGGA
ATGTTGGCCATGGAGTGGTTTTTGTAGGAGGGAGTTTGCCATGGAGTCAA
TAAATTGTTTCTTAACGGTTTGTTTGAGTTGAATTTTCGAGAGAGTTTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036998-exon-sc0001550-1491911889:48116..49118 | TCONS_00036998-exon-sc0001550-1491911889:48116..49118 | Clytia hemisphaerica | exon |
| TCONS_00036998-exon-sc0001550-1510915933:48116..49118 | TCONS_00036998-exon-sc0001550-1510915933:48116..49118 | Clytia hemisphaerica | exon |
| TCONS_00036998-exon-sc0001550-1575043694:48116..49118 | TCONS_00036998-exon-sc0001550-1575043694:48116..49118 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001550 | supercontig | sc0001550:48116..49118 . |
Blast
The following BLAST results are available for this feature:
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