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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036922 ID=TCONS_00036922|Name=TCONS_00036922|organism=Clytia hemisphaerica|type=transcript|length=518bp
ATGACTTGGTAGAATAAATGTGGACGTGGTATTTGAGGCTGATTCACATC
AACAAAAGTTATTTCAAGGATGAAGAGCTCGCTCGCCCGATGGTATAAGC
TAAAGCATGAATTTTCAACTTTAAGTGGCACCAAAGTGACTTTTCTATTT
GTTTTAATCTTTAGTGCTGAAGATGTGTGTTCATCTCTGTATTTCCCGTA
TTACCATCACGGCGAAGAAAACAAAGAGAAcaaTAAGGCGAAATCTTCTC
CCACCAAAGTCAACGAAGTTTGTCAAGCAGTCAGGGAAGCCATAAAACGA
AGTCCTAACGCtgaaaagtaagaaaatttaTTATTCTTAAATTATTATTT
CTCTACCAGATTGAGATTGATCGGTCGTCCGtatgtttttctgcgacgga
gataGTTAGCTgttgatttgtctagatcctaaTTGTCTGAGGACAACAAT
GAATCGGTACTTTTTACGTCATCGATTTTGTTGGTCGAaccatttcattc
aaaaaattttataaaaag Run BLAST on NCBI transcript from alignment at sc0001535:45846..46835- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036922 ID=TCONS_00036922|Name=TCONS_00036922|organism=Clytia hemisphaerica|type=transcript|length=990bp|location=Sequence derived from alignment at sc0001535:45846..46835- (Clytia hemisphaerica)
ATGACTTGGTAGAATAAATGTGGACGTGGTATTTGAGGCTGATTCACATC
AACAAAAGTTATTTCAAGGATGAAGAGCTCGCTCGCCCGATGGTATAAGC
TAAAGCATGAATTTTCAACTTTAAGTGGCACCAAAGTGACTTTTCTATTT
GTTTTAATCTTTAGTGCTGAAGATGTGTGTTCATCTCTGTATTTCCCGTA
TTACCATCACGGCGAAGAAAACAAAGAGAAGTAGGTAGAGGTTTCATTTA
TATTGTAATTATTCAGGTAAAGTCTGCATCTAGGACCACGTTTGCAGGTA
ATGGTTCTGTTTTACTACGAATGGAAATGAAGCCATTCTATTTGTTAGAA
AAGAATTTTATTTAACCAATATATGGCTTCTTTTCGTTTTGGGGTGAAAC
TTCTTCGAGAAACTTTCGTCTATTTTACCACCACTGCGAAGAGAACAAAG
AGGTAATAATTCGGGTTTCCGCAGCCAAATACATCTATGGTGAAATTGCT
TCTAGAATTTCGTATAATTTCATCACTTTAAATCTGGCTTGGTCATTTAT
TCCAAGCATTAAAAAACCCCGGTCTGGCCATGTATTGTTTTAGCTTTTTG
TTCAATCTTTTGTGCGAAGGAATCTTAGTGCGGAAATGGGAAACTTATAA
TAAACGACGGTAATAATTTCAATTTTCCATATCTTTAAATTTATTTTTTC
AGCAATAAGGCGAAATCTTCTCCCACCAAAGTCAACGAAGTTTGTCAAGC
AGTCAGGGAAGCCATAAAACGAAGTCCTAACGCTGAAAAGTAAGAAAATT
TATTATTCTTAAATTATTATTTCTCTACCAGATTGAGATTGATCGGTCGT
CCGTATGTTTTTCTGCGACGGAGATAGTTAGCTGTTGATTTGTCTAGATC
CTAATTGTCTGAGGACAACAATGAATCGGTACTTTTTACGTCATCGATTT
TGTTGGTCGAACCATTTCATTCAAAAAATTTTATAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036922-exon-sc0001535-1575043694:46606..46835 | TCONS_00036922-exon-sc0001535-1575043694:46606..46835 | Clytia hemisphaerica | exon |
| TCONS_00036922-exon-sc0001535-1575043694:45846..46133 | TCONS_00036922-exon-sc0001535-1575043694:45846..46133 | Clytia hemisphaerica | exon |
| TCONS_00036922-exon-sc0001535-1510915933:46606..46835 | TCONS_00036922-exon-sc0001535-1510915933:46606..46835 | Clytia hemisphaerica | exon |
| TCONS_00036922-exon-sc0001535-1510915933:45846..46133 | TCONS_00036922-exon-sc0001535-1510915933:45846..46133 | Clytia hemisphaerica | exon |
| TCONS_00036922-exon-sc0001535-1491911889:46606..46835 | TCONS_00036922-exon-sc0001535-1491911889:46606..46835 | Clytia hemisphaerica | exon |
| TCONS_00036922-exon-sc0001535-1491911889:45846..46133 | TCONS_00036922-exon-sc0001535-1491911889:45846..46133 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001535 | supercontig | sc0001535:45846..46835 - |
Blast
The following BLAST results are available for this feature:
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