TCONS_00036804 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036804
Unique NameTCONS_00036804
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1234

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036804 ID=TCONS_00036804|Name=TCONS_00036804|organism=Clytia hemisphaerica|type=transcript|length=1234bp
TGGAATGACACTTTGTTATCGTTTCTACAGTCTTGTAACTGCTTCTTTGT
GTTTGAAGAATTATGATTAGCAAAGGTTTGATAAAGGATGATACGTTACG
CAAGGTGTTCTCTAttagaaattgtattttttaattactTGTGTAATCTT
TTGTTTTACTTATGTCGTGCGACAGTTCGtttgaagtatttttgtctGGA
GATTTGAGGAGAAAAAGCTTTGATAAAAAGCGCCACCTGTGATCCGTCAT
TTGTACCGTTCAAAACCAATTCAGATATTGAAAGCTCATCGGAAGTGTCA
GTTttgATTTCATCTTTCATTCGAAACACGTATGGTGACAATAGAGTCAC
AAATGGTAACTGATGGCATATATTTAAAACTCTTACCACTAAGAAGTAGG
ACCACTCACATTAGAGATGTAATGAGTTCTTTTGAATTCTTCAATAAAAC
ATTCTAATGGCCTTGGACGGAAATTATTGACGCGTTCACTATACATTGAC
TTAACATCATCGTCAACTTCTTAACCAAAGCTCAGCTGATGCTTTCATCG
AATGACAGTCTTCAAATACACTTAACATATTCGTGCATAAGTGAAATATG
AACTCAAGCGAACAACACGTTTCAAGAATAACCGCCCGGGGAAAGATTAT
GTAGCAAAATTCCGTGAACGCATGGATGTAACGCTGCGGACTGTGGATAA
AATTAAATCAGATCGATTTAAATACACAAACGACGAATTAAAGTCTGATG
TACTGCGAAAATGCGATCGGATATTATCTGCCACCTATGATAATATATAG
ATCGGAAGAGGTCTACGAGCCGTGGACAAAGGGCGTTCAAGGGGTGGTGT
ACAAACCTACCGAATCAGGCTGATTCAATGGGCTACGCTTCGAGGATTGG
TTCTTTCATGTCGTTCTTGGACTGCGATTGACGAAATGATGAAGCCTGCC
TGTCTCATTGAGGACAACTTCTCAATAAATGCTGTCGAGGAATGCGAAAG
AGGAAACATACTCTTCATACCGCTTTCGCCCAATTCGACCTATCTATCAC
AACGACTGGAAGTAGCCGTTTTCCGCGGATTAAAAACTGATTGGAAGGAT
GTATACTGACCGCATGGCGCATCGACGTCTTTGATCTGGGGGATGGATGT
TTCGACCGACGATATCCGAAAAAGCTTAAGCTCGACCAAAAAAGTTTCAC
GAAATGAAAGACTTTATCCTGGATTTGAAGGTAG
Run BLAST on NCBI

transcript from alignment at sc0001518:15822..30347+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036804 ID=TCONS_00036804|Name=TCONS_00036804|organism=Clytia hemisphaerica|type=transcript|length=14526bp|location=Sequence derived from alignment at sc0001518:15822..30347+ (Clytia hemisphaerica)
TGGAATGACACTTTGTTATCGTTTCTACAGTCTTGTAACTGCTTCTTTGT
GTTTGAAGAATTATGATTAGCAAAGGTTTGATAAAGGATGATACGTTACG
CAAGGTGTTCTCTAttagaaattgtattttttaattactTGTGTAATCTT
TTGTTTTACTTATGTCGTGCGACAGTTCGtttgaagtatttttgtctGGA
GATTTGAGGAGAAAAAGCTTTGATAAAAAGTAtatgtattttttcaaaat
gtttattattgatttgttttttgttcCTATTCATCAATTATTGTAGTCGA
TTATTGTTTAATGAGCTATGAAACGATTGTTGAGTTTTGGGAATTCCTTT
AGAGCAGTTCTTTGAGAGGAGATGTCAGGTTTGAATGGTATTAGGAACAT
AATTTAAGTCATTGTTTTGATACGTGGTAGAAGATGAGCTGATTGGGATT
GattgaattttatgaaatagGTTGTATACTAGATGAAGTGCTCTATTAAG
CATTGTTTTGTATCTGCTTTCTCGACAGTTAATATTGTAAGTTGGTGATT
TTACTGGCAGAATAAAGGGTCGTCATCCGGTTTCCGCATTTTTGCTACTT
TTGCTTTTAAACAGTTTCTAGATGAAGGCTTGTTTTAGTAGActttgttt
tgactggactTGGTTATGACCTTGTTTTCTTGCATGTGTCTTGATTTCGA
GATGAACTTTTCATTATTGACAAGGTTTTATGTAACTTTTCGAAATCATC
CTTTTTCAAAGCTTGGTGATATTTCAACGAATTTAAACTCTGCGTTGTGC
TGACAGGTTTCGCTATTGAAATGATTATGGCTTTCAGATCCctcttttga
atcttttttgacCAATTTGCTTTACGTATGATTAATGTCGAGGTTATGTT
ATGGTGATGCTAATATATCTTTCTCATCTCTTAATACGATTTTCGACTTC
AATTAATATTTTGCTGACCAGAGTAAcgtaaaaaaaggaaattttcttcT
GCTTTCGTTTTTTAGGAGACTgatcgttttttatttgaatctatAGTGGA
CAAAATTTATCATTCTATAATTAATACTTTACACTCATAGTGACCTATTT
GACTGTTTTGAAGAAAGTGTGGAAGCAATGGTGTCggacatttcattttt
ttataaggaaccttaactttgctctgagcctggagttccttatttttaca
gagaatttcagtctcaaagttcttatagagttccttactacataggaaat
tttgaactttttgccccttgaaagatcaaaatttggtcaaattagtcaca
ataaggtacattattttcaaatccacttattctcagcctgagcagctcct
taacaattccttattttttttgaaccattttcagcctcgtgttccttata
aaaaaaaaacgtgtagaagtGTTTCCTTTCAGGGGGCTATGTGTCACCAC
TTTGCAATGGAGCAGGATGGAAGTACAGGTTTTAAGTGACTGGTGTACTG
TTCAATTTGTAGCAGAGTCTTTTGTGATTTGAATGTGAAAAACTTGTTTG
ATGGCTTGCTGAGCTTAAAGTTACTCAACCTTTAAAGTGTTGACTGACTT
AAAGTGGTTTTCATAAAACTGACTTGTTGATCCAGTATTTCGAAATTAAA
TCACAGCTTTTCCCTACTGGTTTGGAGTGCATAAGATTAATTCTTCCtga
attttgaattaaattttttactttcaagaaaaaaatcagtgaCATAGTTT
TCACTGAATTTGTATCATATATTTGTTATTCGTCGGTATTTTGATGATTA
TTTGAAATTCTTGCTCGATAAGTCGGTGGCTGGATGCAATGGCTTCTAAT
GGTCCAAATGATGGAAGTTAACACTGGAACAGGTTTTTTTGGCATGGATA
TCCTTTTGTATCATCATGGAAAGCACGAGTTGAAGTTACTCTTTgggaca
atttttttcatttcaacgGTTAACCGAAAGATATGTTGTTAGACTTGTTC
GTTGTATCTAAGCCTTCCATTCAACTCATAGATTGATAGGATCTCCATGG
TTTTTATCAACATTGAACATTGGTCCAGAGACAAAGATAcaacaaaattt
caactttgtaGAAAACAAAGTCATAGGGTGAAAGTAGCTTTGTTATGCTC
TTATTTTCTCTAAGTCATAAAGACTGCAGACTGAGTGAAGTTTACGATGG
TATAGACTGGCTAGTAATCGCATTGTTGATNATCATAAAGACTGCATACT
GAGTGAAGTTTACGATGGTATAGACTGGCTAGTAATCGCATTGTTGATAT
AACAGTGTTGCACTCTCTTCAAGTCAAATCTTAATTAGGATGTCTCATTA
CGAATGACTTGGGCTTCATATCAAAACTCCGCAAGAAGGTTGAATATCCC
ATTGTCTAgatctcaaattttctaaatttaacatttcaaattttgaaatg
ttcaaAGCTCTTTCAAACATTCAACTAGTTTTCATGAAACTATTTTAAAG
AGTTAGTAAATAAAGTTGAAAtgttaaatttagaaaatttgagatcTGGA
CAATGTGATTCAACCTTATTGCGGAGTTTCAATATGAAGCCCAAGTCACT
TCTAATGAGGCATCCTAATTATAATTCGATTCGAACTGTTATATCAACAA
TGCGATTACTAGCCAGTTTTATACCATCGTAAACTTCACTCAATCTGCTG
TCTTTATGACTTAGAGAAAATAAGAGCAACAAAGCTACTTTTACTTTGAT
CATGACTGTGTTTTCTACAAAGTTGAAGTTTCTTTGTCTCCTGACCAATG
TTCAATGTTGAGAAAAACCTTGGAGATCCTATCACAAAACTATGAGTTGG
AAGGGAAAACTTAGATACAACGAACAAGTCTAATAACATATTTTTCGGTT
AACCGTTGACATGGAAAATATAGTCCCAAAGAGTAACTTCAACTCGTGCT
CTCGTTGATACAAAAGGATATCCATGCCAAAGAAATCTGTTCAAGTTTTC
ACTTCTATCATTTGAACCATTAGAAGCGATTGCATCCAGCTACCGACTTA
TCGCGCTAGAATTTCAAATAATCATCATCAAAGTACCCATGAATAACAAA
TTATATGATACAAATTTCGTGAAAACtttgtcattaatttttttcttgaa
gagtaaaaaatttaattcaaattcAGGAAAAATTAATCTTATGCAAACCA
GTTGAGAAAAGCTGTGATTTAATTTCGAAATACTGGATCAACAAGTCAGT
TTTATGAAAACCACTTTAAGTCAGTCAACACTTTAAAAGTCGAGTAACTT
TAAGCTCAGCAAGCCATCAAACAAGTTTTTCACATTCAAATCACAAAAGA
CTCCGCTACAAATTGAACACTACACCATTCACTTAAACCTGTACTTCCAT
CCTGCTCCATTGCAAAGTGGTGACACATAGCCCCCTCAAAGAAAACACTT
CTAATAGTAGTTGACGAATGTTGATCAATCAATAACTTTAAGCAGCACTA
AAATAATTAACTtaaaaaacattatcaaaaNTGACGAATGTTGATCAATC
AATAATTTAAAGCAGCACTAAGATAATTCacttcaaaaacattatcaaaa
tgTGTCTCATGGCAACTGATGAATCTATCACAAATGACTGAAGTGTCCGA
CACCGTTGCTACCACACTTTCTTCAAAACAGTTAAATAGCTTGCTGTGAG
TGTAAAGTATTAATTGAAGAATAGCAAATTTTGTCCGCTAAAGattcaag
taaaaaaacaaTCAGTCTCCAAAAAAATGAAAGCAGGTGTTTCTCTCTAG
TCAGCAAGATATTTATTGAAGTCGAAAACCTGTATAAGAGATGAGAAAGA
TATATTAGCATCACCGTAGCATAACCTCGACATCAATTTCATACGTTAAG
CaaattggtcaaaaatattcaaaacaggGATCTGAAAGCCAGAATCATTT
CAATAGTAAACCTGTCAGCACAACCCAAGCTTTGAAAAAGGATGATAtcg
aaaaatcacaaaaaactttttgacaatAATGAAAAATTCATCTCGAAATC
AACACACATGCAAGAAAACAAAGTCATAACCAAGTCCAGTCAGAACAACG
TCTACTAAAACAAGCCTTCATTTAGAAACTGTTTAAGAGCAAAAGTAGCA
AAGATACAGAAATGATAACTACCCTTTATTCTTCCAGTGACAAAACATCA
ACTTACAATATTAACTGTCGAGCAGATACAAATCAATGCTAATAAAACAT
TTAGTATAAAACctatttcataaaattcaatCAATCGCAATCAGCTCATC
TACCacgtataaaaacaaaaattcgaattctgtTAATAATATCATTCAAG
CCTGACAATTTTGATAATTCCGTTAAGACGATCAGTCTCCAAAAAATGTA
AGCAGGTGTTACTCTGGTCagcaaaatatttattgaaGTTGAAACTTTGC
ATAAGGGATGAGATTAATAATAAGAATAATCAAACACAACTTACATATTT
GAAGACGGTTTAAAAGCCATAataatttcaacaacaacacgTCTTAAGTT
GGACTTTGATATGATCTCGAAGTCTTTTAAAGTCTGATAGATTTGTTTCC
ATACATCATGTCTGTACAAAATATTCCTTCATATTGTTCTTCTGAAACTC
ATAGATCATACATCAATATTGTTTCTTCTTTTCTCTTATGAGGCGCCACC
TGTGATCCGTCATTTGTACCGTTCAAAACCAATTCAGATATTGAAAGCTC
ATCGGAAGTGTCAGTTttggtaaatatttttgaacttaTACTATATATCT
GCTACTTTTAAACTACGACTTAATCCTGATTTAGTTTAACCCTGTGTAGC
CCTGTAAACTCAGTATATTTTACTCTCATATTTTTATCTTCAGATTTCAT
CTTTCATTCGAAACACGTATGGTGACAATAGAGTCACAAATGGTAACTGA
TGGCATATATTTAAAACTCTTACCACTAAGAAGTAGGACCACTCACATTA
GAGATGTAATGAGTTCTTTTGAGtaagtttttttgttaaaataatgtcta
tgttttttgtagaaatgtttACAAGCCAAGGAATTGTTCTTGTACGTAGA
TCGGGTGGTGCTTTCATACGATCTTAAAATTAAAGACGGCTTGCGTGACC
AGTCCTTTGCGTAGTGAGAAAATAATTACCTTCCTTTTCTTCTTACAAAT
TTCGAGTATGAATACTTATCCAACGATGAATGAGGTGAAAACTATTCATT
CCGCGTTAGGGATCTTAAAATATAATTGTGATGATTTCAGCTTTAGAAGC
GTTTTCAAAGATTTGATACATGGTTTATGGCAACGTATTGAAACTATGTG
AATCATAGTTGCCTATACGACGCAAAGAATAACATTGATTCaaagtttct
cttttatttcagATTCTTCAATAAAACATTCTAATGGCCTTGGACGGAAA
TTATTGACGCGTTCACTATACATTGACTTAACATCATCGTCAACTTCTTA
ACCAAAGCTCAGCTGATGCTTTCATCGAATGACAGTCTTCAAATACACTT
AACATATTCGTGCATAAGTGAAATGTAAGTTAAACATTTGGAACATAGAT
TTGATTGTGCCCTGATGAGAATGGGAGCACTCAAGTTGAAAAACGACCGT
GCGTGCGGCCCAAAATAATGCCTTTGAAGTCGGACCATTATAGTGTAGAA
AAGATTTAGccaattttgagcaaatttgacgaaaaactTATGGTGCATTT
TGGCCAGATTTTCCATATTTTACACCCTCAGAGTGTACTTTTTCTCCGCA
TCTTTTCTCATTTTgacccttgtagtgcacttGGGGAAGCAAGGAGAAAT
GACCCTTAAGGGCAGCACGCACAGTAGGTTAtttatgagtgccccccccc
atGCCTGAGATACAGCAGGTATATAGAATTTAGTGATCGACgcattattt
ttcttgttaTTACTATTGACTTTTATCAGGTGTCTCGCTTAAGTATCTCG
CGACTACGCGATGGAGGAAGTTATAAGAGCTGATGGGAAAGAGAGATGAA
CCATCCCATCAGGGGAACTGACCTTGAAAATGATCTAAAAGTATTAGAAT
ATTTTAGGAAATCACTACGCTAGAAATGTTGGTAAACATAAAATAGTAGC
taagaatttcaatttcaaataattaaacATATCAGACACCATTTAGTACA
CCATTCCAGACAATTCTGTCCAGTACCATATCATACCAATCAACAATATC
AACTTTTCTTAAAGCTTTATGAATGTCTCGTTCATATGTAAATTCCGGCG
CTCCTTTTGGACAACGATTATTAACCCAAGACGAGAGAAGCTTGCGATTT
Ctgaggacaattttttttctggccaaaaatgccggatctatgtcggaaat
cgccgtttttacaggacttttttttttaatattctttttttttcactcaa
aaacattTATAACAATGCCAAACATCAAACATGATTcatttgtcaataaa
actgattttttatgccggatcttttttgaattttcaccaaatttcaccat
caatctttttttatttttcgctcAAAATGCATATTAGCATGTTTAAAATG
TGAGGAATTTCGAATTCTACGAAgattttttgactgaaaatgcGGGAAAT
CTACAAAAATTTGCTCAACTTTAAATAGTACCTCGAGTGGATCAATTTTG
GcagaaattaaatttggcaaatttcgaCATATTAAATACtgaaaatacta
aaattttCGTCGTCAgtcgttcgccaaaatttaGCAATTAGACTATTCTT
TTATTCTATGAAAAGTATCATTTTTGCGTTGATTTTATGCATTTATCATG
AATTTCTGTTTctccaattttcaaatttaatcccTGTCGAAAATCGTATT
TTGGTCATCCGTTAAATTAGATCCACGGAAAAATTTATTCATTTGAGGTA
ATTTTGAAAGTACCCCGGAAAATGCCCACCTCTGGATATCATGAGGAACA
ACCAACTTATTATTTCGGGCTTTTTATGAGGGGTTAGAATTTTGTGTTGG
TTTCTCAACTTGACTTTATCGCAGCATCTTGGCGCAGCACCATCCGAATT
TTTGCGACTTTAGAGGGCGCTGGAATGTTGAGCAAATTTTGAGAAGTTGA
GCGTTTTtagacctaccccggtggaggtcctataaattaactgttgtccg
ttcgttcgtccgctCATTATGAGCTTTTCTCCAGATTGGCTCGTTCAATT
TTTCCGATATTTTTCACAAAGAATCAAAATGGTACCACCCTCGAATAATA
ACTCATTTTCTCCAtagagatggatgttttttttggacctaccttgaggT
CCTACAAATTaaaggctctgaccatagtcagaaaattgattttagtatct
gaacataaaagttatgttttagattttttNGGAGGTCCTAcaaattaagg
gctctgaccatagtcagaaaattgattttagtatctgaacataaaagtta
tgttttagattctttaacatttttaacaaaaaattgcctttataatttgc
tttttaatcaaaccccttaagagtaattaagaacttaattgcaaaaatga
cgctatgaactttaaaaagacgttaataatatgttgcatcaccttctttt
ataaaaagtgctaagttttaatgggtaattaattaacctttttgtttcga
acttttttcaaactttccgcaaagaattgaactattttaatttttgcgga
aaacttttctaaaataatgtgtcaaaagttatgactgttttttaagcaaa
atctagatgaaaaattgttgaaaaaccactattttgaagcatttcgagaa
aaagaagcatttacaaaaattttccgcaaaaattttattgttcggtaaaa
gatgcaccatctactgcgaaaaatttttcaaaatgttttttcttcgccga
aactaagctcttcaaagttgaaatactcttcctcgccaaagtcttcattt
tctttttcatcaaattttttcaatgcgatttttgaattttcagattcaag
aatagtttgtcaacagaaaatgtataacatgccatagttttgttggttac
atcagtcagaaaacacattttaaacacggcaattatgaaaaattcactat
ggtcagagcccttaacctctgttcgtccaTTCGTCCATTCTTaagttcgt
ctgttaccaacttttctcgggattgaatcatgggaattttgtgatttttg
gtacaaaggtgcaaaatggtgattaccaaaatgtgacggagcccgatttt
cgttaaaaatctgttcattagcttttcctatttttttgtacaaagacgtA
GAATTACAGTTGCTAAATATAAATAAGCtcatttttcggaaaaaaaatat
tttacgtccaaaaatgcccaaaaatagggttttttaaaCTTTGCTAAAAT
CTGTCCATTAgcttttcctgatttttttatACAAAGACGTAAAATTAAAT
TGTgctaaatatgaaaaagttcatttttgccttcattaaacttttattat
tcgttttataaacagGTAGGCCCAAAACATCGcttgttgtttttgaaatt
aaaaaaaaatgagtgaAATTGTTACCAACTAAATCAGTACTACTTCTCTT
CAAAGTGTTGACATGGAAACATAATGACAAAATTACTTGACAATAGAAAA
CCTACCTCCTTCAGAATCACTTACACTCTCCACACTGTCCCCCGTTTTCG
CAACTTGTTTATAACAATGTCACAATGGGGTAGGTTCTACAGGGATGTGT
ACTATAATAGAGATATCTATGTATCTTATATAAAACCTTTGATAGTGGTG
TATTATATACAAGATATCTGTGTTACNATATTTTATATAACACCTTTGAT
AGTGGTGTATTATATACAAGATATCTGTGTTACCAAAGGAATGAAATGAA
TATCTCCGATTACCTTTTCGGCCCATTTAAAGCCGGCCATATTATGCCAC
TGCGCATTTGGTCGTAAGataccttatcggtagaaaaCTCCTCTTTTTAA
AAGTGACGAAAGCAATCGGTTTGGTGAAGAAATTCTACCAACGATAATTT
GTATTTACAGAAAGATGGAAAAACGATTCAAATCTGTGCTAGATTTACTC
GCCCGTTGGAGGTTTGGAGGTACTGTTGAGGATTTCAAGGATATGATAAA
ACTTTATTTAGATGAACTCAAGCGAACAACACGTTTCAAGAATAACCGCC
CGGGGAAAGATTATGTAGCAAAATTCCGTGAACGCATGGATGTAACGCTG
CGGACTGTGGATAAAATTAAATCAGATCGATTTAAATACACAAACGACGA
ATTAAAGGTATAAGCGTTTTTGCATTTGATCGTTTCCAAATAGATTGCAT
TTATTGAAATCGCATAGTTTTCAAGTGATAAATCTCACTCACACTTTTTC
CAGAGTCGGTTTCACTTACGGCAGCATTCTTCGGGTATATttacaacacc
cctgtctcgggGATACGGTTAGAATTTACCGATTGGGATGGAGAGTCAAT
TTGCCTTAATTTGGTggagatttaaagttcttctaCATTGTTTTTACCGC
TTTAAAACCCACTGCGAATTCCTAGAACTGTAAGTGTCGGTAGTCGGGAT
AACATTTGTTGTAATGTAGTTTTCCAACGGCGATGAACGTTCAAGGTGTT
TTTCTCACCCGGACGaatctttagtcaatttttacAGTGGAGGAGGTCCC
ACCGTGTCTAAAGAAAAATGGTGTTTCACAAGTCTGTTAATTTCGACATT
GATTATTACAGAAGAAAGTTTTTCCATTTGCACGTTCGTGTCTTGTTATC
TATACGTTGATCTCTGTTAATACGCATTAACAGTGTATTCTTtctttatt
gttcttttttgacacccctgtatcatcGTCCTGCCACGAGAATTCCTGGC
AACATTAACAGTGAACGGCTGAAATAGATCAAAATACCTCTGCTGCGTGG
ACAATTCTAAAGATATTGTTTTAAACGGGGTTTGTGCGagtactcttggg
tacctaatagttGGTTGAGCACTCCAAACAGGCCTTTAGGTATTGACTAT
CCGTTAATCGAAATTTCCCCTCTGGGGTTGCGTTGTGAATTTAAAGATCC
AAACTGTTTCTAATATGAATTGAAGACATGAAAACCGGAAACTTTTGAAT
GCCTTTGTTCACGTAGGCGATCGTTACTTCCAGTATTTGGACTTCAAAAT
GGCATTTCTCTTAGACCAGTCTAATTGCACTTGTTGTTTGACCACCTACT
CCTTCcacttatatataaaaaataaacaaacaatatGTATCTCTAAtcaa
cttttccatgtttctttAGTCTGATGTACTGCGAAAATGCGATCGGATAT
TATCTGCCACCTATGATAATATATAGATCGGAAGAGGTCTACGAGCCGTG
GACAAAGGGCGTTCAAGGGGTGGTGTACAAACCTACCGAATCAGGCTGAT
TCAATGGGCTACGCTTCGAGGATTGGTTCTTTCATGTAAGTCTTTGTTAC
AATTTCATTGTTtagaaaaagaggaaaaagagAAATGTGATGAAGAGATA
TAATGTCTTATGGGAAAAAATTGTTGTTCTTCTGTATAGAACATGAAGTC
GAAAATTAAGTTTCTGCATCTATTTTGTACCTTAAAACTTAATGAATGct
gtgaaaaaaatgagaattttcaattgaatattgaatattcTACAGGTCGT
TCTTGGACTGCGATTGACGAAATGATGAAGCCTGCCTGTCTCATTGAGGA
CAACTTCTCAATAAATGCTGTCGAGgtaggttctcttttttttaatctat
atataggtaacacgaacaaatagtacaaaactaaaggttcctagcctccc
gcaaaaggaccaccagatcataccgccaggaggtaGGAACNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNgtgcatactcggcgccttgggccccgcagggttgt
tagtaacggctcgaatttcagtcaggtttaaaaaaaggggtactttgacc
catattatattaatattacccccgtctttttccagttcggtataatatgt
tatgaattgcgtggatttgctgtgcggcgatggctcaacggatagagcgc
tgtcgaaattgatggacaaatgattgacaggtatgaaaactcagtcagaa
atgagaaattaagtctcagaaactcagacagtcagaaaagaggaAAATAG
GATAAGAGATAGGAAAGAAAAGAAGGTGACGATTGACCATCCGATATAAC
ATCTGCCTTTTTCATCGCGCCCCGGCGCCCTACTATTTGAGTACGAGATC
GCggaaaaactaattttcgctcTATCTTCGACTGCGTGAAAATACGCatc
agagcaatgcatcagGAAATTTTGTGTCGTTTCAACAGAATTACTTCGAC
AGTTGCAGAATGGGTCGATTGTGCTTGCAAAGTTATGTCTAAATTTGTGG
TCccgaagatgactgaaaccaacccgTAATCGGTTAGGTAGAACCACGCC
ATCGTTGTCACTAGCCCTGAAAACTGAGTTAGCGCAAGGTCTGAGAAATT
TAAGAGGTAGGTTTAAGCTCGATCTTAATGAAACGTCTTTGTCCGTCAAT
ACAGAGCTTAAGCAGCATTTTATAAATTGCCGAGATTTGCACATGAGGGT
GAtgagaaattcaaaacttaagTAAATATTTAATGACACTTATTCCAGGA
ATGCGAAAGAGGAAACATACTCTTCATACCGCTTTCGCCCAATTCGACCT
ATCTATCACAACGACTGGAAGTAGCCGTTTTCCGCGGATTAAAAACTGAT
TGGAAGGATGTATACTGACCGCATGGCGCATCGACGTAGGTGAATAATTT
GGATTTCTATCTTGTCAAGTTTCTTTTGCCATCGACAATCTGTGACTAAT
TATTGTGGCAAGAATTCCCTACCCCTTAATATCAATGTCGATGGGTTGAA
AAGCTGCCACCATGCTCAGAAATAGCTCACATCAACACTGATATTAGGGG
GAAGGGATTTTTCAAGAAATGGCCacatattttgtcactgattgtataCG
GTTCAGTTTCCTCGCCTCGCCTCATGTCTTTGTCACGTGATTGACGCATT
CCATTtcttaaaaacaagccaatcaaAGTTGACGATTTTTCCCGCGGCGC
ATTTTGATTGGCTGATATCAGCGTAACGGGTAGCTAAAGTAGCGATTTTT
TCACtcattctgttttttttttatggtGGATGGAGgctttgtcaaaaatt
ttcaagttaagtGAATCAATACAatatactttttaaaattgattggcttg
ttttttatgttttcttgGATGGAACCAGGGGTTTAATGACTTCAAATATC
TACTTAATCAAACAGGCTTACTTTTCCCAATGATTTTCTAGAATTTCTGT
AGGAAATTATCTCAAAAAGGAGCCTCAATAATCTGGCTTATGGTAATAAA
TACTAGATTTGAAGATCAAAGCTTTTTTGTGTTCCTTCAATATCTTTTCT
TTCTCGTGTTTACTTCAGGTCTTTGATCTGGGGGATGGATGTTTCGACCG
ACGATATCCGAAAAAGCTTAAGCTCGACCAAAAAAGTTTCACGAAATGAA
AGACTTTATCCTGGATTTGAAGGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021739XLOC_021739Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036804-exon-sc0001518-1491911889:15822..16050TCONS_00036804-exon-sc0001518-1491911889:15822..16050Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1510915933:15822..16050TCONS_00036804-exon-sc0001518-1510915933:15822..16050Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1575043694:15822..16050TCONS_00036804-exon-sc0001518-1575043694:15822..16050Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1491911889:20514..20590TCONS_00036804-exon-sc0001518-1491911889:20514..20590Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1510915933:20514..20590TCONS_00036804-exon-sc0001518-1510915933:20514..20590Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1575043694:20514..20590TCONS_00036804-exon-sc0001518-1575043694:20514..20590Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1491911889:20715..20843TCONS_00036804-exon-sc0001518-1491911889:20715..20843Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1510915933:20715..20843TCONS_00036804-exon-sc0001518-1510915933:20715..20843Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1575043694:20715..20843TCONS_00036804-exon-sc0001518-1575043694:20715..20843Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1491911889:21234..21395TCONS_00036804-exon-sc0001518-1491911889:21234..21395Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1510915933:21234..21395TCONS_00036804-exon-sc0001518-1510915933:21234..21395Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1575043694:21234..21395TCONS_00036804-exon-sc0001518-1575043694:21234..21395Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1491911889:25033..25178TCONS_00036804-exon-sc0001518-1491911889:25033..25178Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1510915933:25033..25178TCONS_00036804-exon-sc0001518-1510915933:25033..25178Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1575043694:25033..25178TCONS_00036804-exon-sc0001518-1575043694:25033..25178Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1491911889:26191..26356TCONS_00036804-exon-sc0001518-1491911889:26191..26356Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1510915933:26191..26356TCONS_00036804-exon-sc0001518-1510915933:26191..26356Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1575043694:26191..26356TCONS_00036804-exon-sc0001518-1575043694:26191..26356Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1491911889:26567..26646TCONS_00036804-exon-sc0001518-1491911889:26567..26646Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1510915933:26567..26646TCONS_00036804-exon-sc0001518-1510915933:26567..26646Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1575043694:26567..26646TCONS_00036804-exon-sc0001518-1575043694:26567..26646Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1491911889:29420..29556TCONS_00036804-exon-sc0001518-1491911889:29420..29556Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1510915933:29420..29556TCONS_00036804-exon-sc0001518-1510915933:29420..29556Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1575043694:29420..29556TCONS_00036804-exon-sc0001518-1575043694:29420..29556Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1491911889:30240..30347TCONS_00036804-exon-sc0001518-1491911889:30240..30347Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1510915933:30240..30347TCONS_00036804-exon-sc0001518-1510915933:30240..30347Clytia hemisphaericaexon
TCONS_00036804-exon-sc0001518-1575043694:30240..30347TCONS_00036804-exon-sc0001518-1575043694:30240..30347Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001518supercontigsc0001518:15822..30347 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.220537	0.313257	0.319773	0	0	0.07911	0	0	0	0	0	0	0	5.42314e-07	0.506207	0.0336953	0	0	0	0	0.683481	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036804 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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