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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036783 ID=TCONS_00036783|Name=TCONS_00036783|organism=Clytia hemisphaerica|type=transcript|length=874bp
ccaaaaacaaaaaacccaTCCAAACAAAACCCTCCATCTCAATCAAAAAG
AAGACCAACAATCAACCAAAAACCACGCCAACCGCTAAACAACCAAAACC
AACGCCAATCACCCAACAACCCACCAATCAGCCCAGACTGGATAAATTac
caacatttgaaaattcgttCTCCATACAAACAAACGCCAAGAAGCCCAAA
CTGACAAATACGATAAACACAAATTACGAGCCTCCAAACTCCTCAACTTA
TTTCTTCAACCGGACACTGTCGATCAGTTCTCGCCCAAAAAATCCAAATA
TAAATGTAAATTCGCCACCACCGCCGTACAAAACTCAACAGACACCAACC
CACCCAACAACACCACACACCAGTCGAATGGAAATACAAATCAACCACCC
AACACCACCAACAACCAACCCATTCAACCCAGCCAACTCTGTCAACCCGT
TCTCCACAAGAACACCATCATTCACCGAAGACCAAACAGCTGAACCAGTA
GACTTGGTGAAACAGACGATGGCAAGAAAGCGAAGAAAACGAGAGACCCC
GGTAATACCCATAATACCCAAATACGCGTGATAAAAGACCAAACAGCTGA
CGTAAACGCATAATGCAGGGCCACCTACGCCATGCTACGACTAAACATCC
AAAGAAGCTACATAGAGGAAAGAGTCGAAATGGACAAGCCACCAAAAGGA
CCACAGGTGAAGGAAATCCAGTCCAAATCAAAGCAGCAATTCAGCAGAGA
ACTGCAAAAACGATGGGACAGAGTCTTCATGGATGCTGGTCCTCAATTGA
CCGAAATTATGATCGACCACATCAAGGCTATCAAAGACCATCACGACCAC
GAAAGGGAAGCCTTGCGAAATCAC Run BLAST on NCBI protein sequence of TCONS_00036783-protein >TCONS_00036783-protein ID=TCONS_00036783-protein|Name=TCONS_00036783-protein|organism=Clytia hemisphaerica|type=polypeptide|length=192bp
KNKKPIQTKPSISIKKKTNNQPKTTPTAKQPKPTPITQQPTNQPRLDKLP
TFENSFSIQTNAKKPKLTNTINTNYEPPNSSTYFFNRTLSISSRPKNPNI
NVNSPPPPYKTQQTPTHPTTPHTSRMEIQINHPTPPTTNPFNPANSVNPF
STRTPSFTEDQTAEPVDLVKQTMARKRRKRETPVIPIIPKYA Run BLAST on NCBI transcript from alignment at sc0001513:34122..34995 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036783 ID=TCONS_00036783|Name=TCONS_00036783|organism=Clytia hemisphaerica|type=transcript|length=874bp|location=Sequence derived from alignment at sc0001513:34122..34995 (Clytia hemisphaerica)
GTGATTTCGCAAGGCTTCCCTTTCGTGGTCGTGATGGTCTTTGATAGCCT
TGATGTGGTCGATCATAATTTCGGTCAATTGAGGACCAGCATCCATGAAG
ACTCTGTCCCATCGTTTTTGCAGTTCTCTGCTGAATTGCTGCTTTGATTT
GGACTGGATTTCCTTCACCTGTGGTCCTTTTGGTGGCTTGTCCATTTCGA
CTCTTTCCTCTATGTAGCTTCTTTGGATGTTTAGTCGTAGCATGGCGTAG
GTGGCCCTGCATTATGCGTTTACGTCAGCTGTTTGGTCTTTTATCACGCG
TATTTGGGTATTATGGGTATTACCGGGGTCTCTCGTTTTCTTCGCTTTCT
TGCCATCGTCTGTTTCACCAAGTCTACTGGTTCAGCTGTTTGGTCTTCGG
TGAATGATGGTGTTCTTGTGGAGAACGGGTTGACAGAGTTGGCTGGGTTG
AATGGGTTGGTTGTTGGTGGTGTTGGGTGGTTGATTTGTATTTCCATTCG
ACTGGTGTGTGGTGTTGTTGGGTGGGTTGGTGTCTGTTGAGTTTTGTACG
GCGGTGGTGGCGAATTTACATTTATATTTGGATTTTTTGGGCGAGAACTG
ATCGACAGTGTCCGGTTGAAGAAATAAGTTGAGGAGTTTGGAGGCTCGTA
ATTTGTGTTTATCGTATTTGTCAGTTTGGGCTTCTTGGCGTTTGTTTGTA
TGGAGaacgaattttcaaatgttggtAATTTATCCAGTCTGGGCTGATTG
GTGGGTTGTTGGGTGATTGGCGTTGGTTTTGGTTGTTTAGCGGTTGGCGT
GGTTTTTGGTTGATTGTTGGTCTTCTTTTTGATTGAGATGGAGGGTTTTG
TTTGGAtgggttttttgtttttgg Coding sequence (CDS) from alignment at sc0001513:34122..34995 >TCONS_00036783 ID=TCONS_00036783|Name=TCONS_00036783|organism=Clytia hemisphaerica|type=CDS|length=579bp|location=Sequence derived from alignment at sc0001513:34122..34995 (Clytia hemisphaerica)
TCACGCGTATTTGGGTATTATGGGTATTACCGGGGTCTCTCGTTTTCTTC
GCTTTCTTGCCATCGTCTGTTTCACCAAGTCTACTGGTTCAGCTGTTTGG
TCTTCGGTGAATGATGGTGTTCTTGTGGAGAACGGGTTGACAGAGTTGGC
TGGGTTGAATGGGTTGGTTGTTGGTGGTGTTGGGTGGTTGATTTGTATTT
CCATTCGACTGGTGTGTGGTGTTGTTGGGTGGGTTGGTGTCTGTTGAGTT
TTGTACGGCGGTGGTGGCGAATTTACATTTATATTTGGATTTTTTGGGCG
AGAACTGATCGACAGTGTCCGGTTGAAGAAATAAGTTGAGGAGTTTGGAG
GCTCGTAATTTGTGTTTATCGTATTTGTCAGTTTGGGCTTCTTGGCGTTT
GTTTGTATGGAGaacgaattttcaaatgttggtAATTTATCCAGTCTGGG
CTGATTGGTGGGTTGTTGGGTGATTGGCGTTGGTTTTGGTTGTTTAGCGG
TTGGCGTGGTTTTTGGTTGATTGTTGGTCTTCTTTTTGATTGAGATGGAG
GGTTTTGTTTGGAtgggttttttgttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036783-exon-sc0001513-1491911889:34122..34995 | TCONS_00036783-exon-sc0001513-1491911889:34122..34995 | Clytia hemisphaerica | exon |
| TCONS_00036783-exon-sc0001513-1510915933:34122..34995 | TCONS_00036783-exon-sc0001513-1510915933:34122..34995 | Clytia hemisphaerica | exon |
| TCONS_00036783-exon-sc0001513-1575043694:34122..34995 | TCONS_00036783-exon-sc0001513-1575043694:34122..34995 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001513 | supercontig | sc0001513:34122..34995 . |
Blast
The following BLAST results are available for this feature:
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