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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036774 ID=TCONS_00036774|Name=TCONS_00036774|organism=Clytia hemisphaerica|type=transcript|length=1562bp
AAAGACAACCTTACAAGGGGGGCGTTCTCTCCATTTCCTTAGGTACCCCC
AGACTCAGTAACAGAGTAAAATATATGCGTGAGATAAAACTACGATAATA
AATAATACTTTAAATCTTACTGTAGGTCCAAAACGAATTATACAAAATCT
TGAAGCACAACCTTCATCTGGCGTCTAAGAGGAAATCCTAGAAGCAAGAA
CCTTAGCCTGATAAAACCGAGTAAATATTTTGGCATCCAAATCCTGTCGA
AAACATCTAGCTTTAACAGCAGCGACGATGATTTGTCCAAAAAGAATTAG
CTTATTTTTCAATTGTAAAACTATAACATATAAATCTCAGCATTATATcg
tagaggtcaatagacctgcaaaatataattctatgaatactATCATGAAT
ATGAACGCTTTAATAATAAATCTAACAAATATATAGTCTCGCATATAAAC
ATGGAAAAGAACAACTTTTAAAGTTATTGAAAGGTTTACGATGCGTCGAG
AATAGAATTAATTcgatttaaaagaaatttatgaGCAGGCCTTTCCCCag
gcttttttttcaaacaaaagtcTGAAATAGTATGTAATCTTGTCTCCAAT
GCATCATCCAAATCAAAAGTGATCTTTcgtttaagaacaattttcaacAA
TCTACCAAACGAATAAACATCTGAAGAGTAACTGACCTTGGATGATTTGA
ACAGCTCGGGTGCAAAATGAGATTGACACTCAAACTTGGTCATTATGTCA
ACGACGTTAAGCTTAGCGCTCTCAGCGCGACACGCGAATGCAAAGCCAAT
GATCTTAGGACAGTTTCcatttaatataattttatctGCAACCAAATGGT
TTTGGATAACCCCTCTGTCGAACAGAAAATTCATCCTTCCATTATTCCTC
GTATTAGACATTTAAATTCAACCAAGGAAgtcattgaatatttcaatgat
tttgaaaGACTGAGCCCAGGCTCAAAATGTAAAACATGGCCAAAGCTGTT
TGAAGAATGCACCAATCCAATTGTACTGACAATATTTGCGTGTTCACCAA
CAAATTTTAGGAGACGGTGCTCATGGCTCACAATAGCTAACGCTTGAACA
CCAAAAAAACCATCAAAGTCATGTTTTAAAACCACCGTGTCACCACTGTT
TGAAAAAGTTATCAAATctgttttaaaaaaagatcCTTTACAAAGGAAAG
TTGTCCGAATGTCTGCAAAGTTTGCTGGATCAAGTAGAGTTGACTGTTGC
TGTTGCATTAAAAAATCACCAGCGTGAAATGGATTTGTAAAAAGCGATGC
ATCAACCATGAGAGTTGATCTGGTTTGTCcaatttgaataattttgagCT
TAGTAAACTGTGCATTTCGCAAATACAAAGATGcattcttttctttcaaa
atgttgaTTTCTTGATCTTTCTatttatgaggcccccccagcggacccaa
atttcacgcattcacgcaaaaaatgttcgcaattcacgcattcacgcaag
tttttctcgaaattcacgtaaacccaattttttgggaaatcggggaaatt
ttcggaaaaaat Run BLAST on NCBI protein sequence of TCONS_00036774-protein >TCONS_00036774-protein ID=TCONS_00036774-protein|Name=TCONS_00036774-protein|organism=Clytia hemisphaerica|type=polypeptide|length=142bp
MVDASLFTNPFHAGDFLMQQQQSTLLDPANFADIRTTFLCKGSFFKTDLI
TFSNSGDTVVLKHDFDGFFGVQALAIVSHEHRLLKFVGEHANIVSTIGLV
HSSNSFGHVLHFEPGLSLSKSLKYSMTSLVEFKCLIRGIMEG Run BLAST on NCBI transcript from alignment at sc0001510:39904..41465 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036774 ID=TCONS_00036774|Name=TCONS_00036774|organism=Clytia hemisphaerica|type=transcript|length=1562bp|location=Sequence derived from alignment at sc0001510:39904..41465 (Clytia hemisphaerica)
attttttccgaaaatttccccgatttcccaaaaaattgggtttacgtgaa
tttcgagaaaaacttgcgtgaatgcgtgaattgcgaacattttttgcgtg
aatgcgtgaaatttgggtccgctgggggggcctcataaatAGAAAGATCA
AGAAAtcaacattttgaaagaaaagaatgCATCTTTGTATTTGCGAAATG
CACAGTTTACTAAGctcaaaattattcaaattgGACAAACCAGATCAACT
CTCATGGTTGATGCATCGCTTTTTACAAATCCATTTCACGCTGGTGATTT
TTTAATGCAACAGCAACAGTCAACTCTACTTGATCCAGCAAACTTTGCAG
ACATTCGGACAACTTTCCTTTGTAAAGgatctttttttaaaacagATTTG
ATAACTTTTTCAAACAGTGGTGACACGGTGGTTTTAAAACATGACTTTGA
TGGTTTTTTTGGTGTTCAAGCGTTAGCTATTGTGAGCCATGAGCACCGTC
TCCTAAAATTTGTTGGTGAACACGCAAATATTGTCAGTACAATTGGATTG
GTGCATTCTTCAAACAGCTTTGGCCATGTTTTACATTTTGAGCCTGGGCT
CAGTCtttcaaaatcattgaaatattcaatgacTTCCTTGGTTGAATTTA
AATGTCTAATACGAGGAATAATGGAAGGATGAATTTTCTGTTCGACAGAG
GGGTTATCCAAAACCATTTGGTTGCagataaaattatattaaatgGAAAC
TGTCCTAAGATCATTGGCTTTGCATTCGCGTGTCGCGCTGAGAGCGCTAA
GCTTAACGTCGTTGACATAATGACCAAGTTTGAGTGTCAATCTCATTTTG
CACCCGAGCTGTTCAAATCATCCAAGGTCAGTTACTCTTCAGATGTTTAT
TCGTTTGGTAGATTgttgaaaattgttcttaaacgAAAGATCACTTTTGA
TTTGGATGATGCATTGGAGACAAGATTACATACTATTTCAgacttttgtt
tgaaaaaaaagcctGGGGAAAGGCCTGCtcataaatttcttttaaatcgA
ATTAATTCTATTCTCGACGCATCGTAAACCTTTCAATAACTTTAAAAGTT
GTTCTTTTCCATGTTTATATGCGAGACTATATATTTGTTAGATTTATTAT
TAAAGCGTTCATATTCATGATagtattcatagaattatattttgcaggtc
tattgacctctacgATATAATGCTGAGATTTATATGTTATAGTTTTACAA
TTGAAAAATAAGCTAATTCTTTTTGGACAAATCATCGTCGCTGCTGTTAA
AGCTAGATGTTTTCGACAGGATTTGGATGCCAAAATATTTACTCGGTTTT
ATCAGGCTAAGGTTCTTGCTTCTAGGATTTCCTCTTAGACGCCAGATGAA
GGTTGTGCTTCAAGATTTTGTATAATTCGTTTTGGACCTACAGTAAGATT
TAAAGTATTATTTATTATCGTAGTTTTATCTCACGCATATATTTTACTCT
GTTACTGAGTCTGGGGGTACCTAAGGAAATGGAGAGAACGCCCCCCTTGT
AAGGTTGTCTTT Coding sequence (CDS) from alignment at sc0001510:39904..41465 >TCONS_00036774 ID=TCONS_00036774|Name=TCONS_00036774|organism=Clytia hemisphaerica|type=CDS|length=429bp|location=Sequence derived from alignment at sc0001510:39904..41465 (Clytia hemisphaerica)
ATGGTTGATGCATCGCTTTTTACAAATCCATTTCACGCTGGTGATTTTTT
AATGCAACAGCAACAGTCAACTCTACTTGATCCAGCAAACTTTGCAGACA
TTCGGACAACTTTCCTTTGTAAAGgatctttttttaaaacagATTTGATA
ACTTTTTCAAACAGTGGTGACACGGTGGTTTTAAAACATGACTTTGATGG
TTTTTTTGGTGTTCAAGCGTTAGCTATTGTGAGCCATGAGCACCGTCTCC
TAAAATTTGTTGGTGAACACGCAAATATTGTCAGTACAATTGGATTGGTG
CATTCTTCAAACAGCTTTGGCCATGTTTTACATTTTGAGCCTGGGCTCAG
TCtttcaaaatcattgaaatattcaatgacTTCCTTGGTTGAATTTAAAT
GTCTAATACGAGGAATAATGGAAGGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036774-exon-sc0001510-1491911889:39904..41465 | TCONS_00036774-exon-sc0001510-1491911889:39904..41465 | Clytia hemisphaerica | exon |
| TCONS_00036774-exon-sc0001510-1510915933:39904..41465 | TCONS_00036774-exon-sc0001510-1510915933:39904..41465 | Clytia hemisphaerica | exon |
| TCONS_00036774-exon-sc0001510-1575043694:39904..41465 | TCONS_00036774-exon-sc0001510-1575043694:39904..41465 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001510 | supercontig | sc0001510:39904..41465 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR011009 | Kinase-like_dom |
Blast
The following BLAST results are available for this feature:
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