TCONS_00036702 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036702
Unique NameTCONS_00036702
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1195

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036702 ID=TCONS_00036702|Name=TCONS_00036702|organism=Clytia hemisphaerica|type=transcript|length=1195bp
TGAAACAATCTGAGCGGCTTATATTTTTTGGTAAAGGACGAGATTCAGTC
AACGTTTTAGCAAAGCTGGCAGAGCACCTACCGAAAGATGTGGATGTTAT
GAATAAATTGGCAACCTCGTATTTGATTATGGGCTCCAATCGTAAAGCAT
TTGATATTCACAAAAAGGTCATATCAGTGGACCCAGGGAATGGTATTGCA
AACGCGAATATCGGTTACATCCTGAAAGCGCTACAGAAGTATCAAGAAGC
TATTCCTTATCTGGAGGCTGGAATTGAAAGCGAAGATCCGGAAACAAACC
AAGCCAAATTTTCCTTGGTGAGGCATACACAAAGTCTGGTCGAACAGATG
ACGCATGGAAACTATACCATCAAGGTGCTGAACGCGGCTTCTTCATGTCG
GCAGCTCAACGATCTACAGAAAATGCAGAATCTAAACTTCGAGCACAACC
TTGGTGGACCGTTGAACAATCTGGTTACGAAAAAGAGATTAGGAAGTTGG
AATATTACTGGAAAACGATGCGTGatgaagcaaataaaattttgaaacaa
aacaaagacCGTTTCCCACTGGAAGACGAAGGGCTCTTAGATACAGGGGA
CTGGAGACAATTGACATTGGATCAACGTggtcaacaaaacaaaaagaatt
gcCAACTTGTACCAAAGACGTGTGAGATCATCAGTCAATTCAAGCAAGCT
ACTGGAAACATAAGAGGACAGatTAAATTTTCGATCATGACACCTGGCAC
ACACGTATGGCCGCATACTGGACCAACCAATTGTCGTTTGAGAGCACACT
TGGGTTTAAGCATACCGAAAGGCGTTGAAATCCGGGTTGGCAGTGAAACT
AGGAGTTGGGAAAATGGCAAAGTATTGATTTTTGATGATTCCTTTGATCA
TGAAGTTTGGCATCGTGGAACAGAATCAAGATTGATTTTGATAATCGATT
TTTGGCATCCTGATTTACCGTTATGGGAAAGACAAAGTTTAGCTCCTATT
TAGATTTTCTTCTAAAGAactagattttatttttgaattctaatttttaa
ctcaaatttccATTGAGTTGTGAGGTTTCCTTAGTATTCAAATCAAGGAC
AAAACTATGTACACTAAGGACAACCAGGGTGTACTTGATAATCCCTAAAT
TTTTAAGAGTAATTAGGTATAAACTATGGATAATCTGGAGCAGCC
Run BLAST on NCBI

transcript from alignment at sc0001501:1..12183+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036702 ID=TCONS_00036702|Name=TCONS_00036702|organism=Clytia hemisphaerica|type=transcript|length=12183bp|location=Sequence derived from alignment at sc0001501:1..12183+ (Clytia hemisphaerica)
TGAAACAATCTGAGCGGCTTATATTTTTTGGTAAAGGACGAGATTCAGTC AACGTTTTAGCAAAGCTGGCAGAGCACCTACCGAAAGATGTGGATGTTAT GAATAAATTGGCAACCTCGTATTTGATTATGGGCTCCAATCGTAAAGCAT TTGATATTCACAAAAAGGTGAAACTCGTTAACTCCTTGACGTCCCACCAG CAAAACCTTGTTCTCTCAGGAGATATTTTCGGCTCTCAGTAGTTTTGATT GAGGActaaagagctttccaacggtaccaaACATTTAGGGTTTCGGTACC ACCAAAGCTGAGATGGTTCAATTCAAAGTTAAAGCATtgaaaaagccatt tttttgcttattgaGAACATCAAGGAgttaattattttgaaaatactaTA TTTGAAGCCGTCAATGGGCCTgagagaaaatgaaatttccctAGGCCAGA TAGATcccttttgattatttttgtccaatttttttgctagggggggggcg tacgggtttgtcGGTGTGTCGGTATTGACCCTTTTTTGCGTCGGTGTTAC GGTGTTTTAAGTAAAAAGTGTCGCTATTTCGGTGTTGGACATGCCTTGCG GTGAcggtaaaattgattttttgggtcggtatttcggtgattCGAGAAAT ACTGGCGGCGAATCTGCATATTTCAAAGGATCTCATAAAGTTTTTGAATC TGCATTTTCAGCTATTGAATATCTTATCTATACAGGAATTGTAGCTATGA CGAGTAGATGTAGCTATGACGAGTAGAATTGTAGCTATAATATAGCTATT TTTGTAGCTACCCTGTCTCATcctctttttaaaattgtgtGCATAATGGT GTTTCTTAACCACTTCTTTACGGGAAATGTGcactttatgaaaaaaatca taatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNAAGCCAGGTCGCTACTGAACAAGAGCTCTTTTGCGGCGCCCTTTTCTA ACGGTGCTTTCGGCTAAGGTAGATTTACTTCTAATAACGTTCAAAAAGAT CTCTTTTAGTTAAACAAGAGgacaaaaatgggaaaattttctccgtttgg gcaaaccatggttgcgcctagCCTCCTCCATTACTTTATACATTCAGATA TCTCTTTTGTTCCCTCGTTTTTGCaaagatcttttaaaaactttttaaat gtttttcttcaaagtcATCTAAAGTAagcactaaagtaaaaatagcATTT TAAACCCTTCAAAGTGTTCCCTAAAAATTCTTGATTTGTTTATCCACTAG TCGTtgaaaaactgagctttaaAGATTTGAAACCCTTGAATCAGCGATAG TTTTCTCcaagaaaaattgaactagtgcTCGTGATATTGAGCATTCGTAC TAAGAATAAAAATCTTAAGCTTGCTCTAAAAGACGTCGGTGTCGGTGTTT TAGGAAAGGTTTGTCGGTATTACggtgatttaagaaaaatctgtcggtat ttcggtgttggcaaccctcgtacgccccccacaaTGAGGACAGATttcga aaacaatgaaacataCAACCTGTTTTAAGCATATTATCCCATCCTTGCCT CAGTGACCCGATGGAGGTTTCTCGTAAGTGGGGTTCGAATAAAGGAATTA CTGTATATATCCAACAATAATGGAGAATATAATCCTCTTTCAATATCTTT TGTTTTCGGCTAGAATATTGCTTCAATTCCAGTCTTTCAGTCTATACAGG GACAAGTCAatctcgtccccgtgtattccaggctttatttgcGTTAACGA TGGACGCTTGAGAATATCTGACGCTATCAGTAAACATAAAAGAAACCGAT AACATGATAATGGTGTCAGCATTGTAAACTAACCCTCTTTTTATTCACAG GTCATATCAGTGGACCCAGGGAATGGTATTGCAAACGCGAATATCGGTTA CATCCTGAAAGCGCTACAGAAGTATCAAGAAGCTATTCCTTATCTGGAGG CTGGAATTGAAAGCGAAGATCCGGAAACAAACCAAGCCAAATTTTCCTTG GTGAGGCATACACAAAGTCTGGTCGAACAGATGACGTAAgtatttcaaat gtttttcttttctttgaacTTCGTTCTTTATACTTCATTTGAGGATAGAG TGGGTGAAAAAGCGACTCAAAAACCCAATGTACacagaaacaagaaaaaa agactttttgacGAATATTAGTACTGAGGAGGGATACAAATCTTTATTTA ACTACTAAGAAAACACCTTCGCTAGTGACATAGTCTTTTTTAAGCTTGAG TGTCCATTTTATCGAAATTGCGTTTGATTACATATTCAAAAGGTCTATGc atgttgaaaattgaaagtaaaacccTACTACAGACTATAGAGttgagtta tttaaaaaagaagatacagacccccttctcacagacccggtagaaaactc gatgggaattgatattcccatattttttatagctagggatttcaattcat tttcttttcaagtcaaaatatTCAGTGGGGGGCGATAAGAAAAATAGCAT AGCATTGGGGGAAAGTTtttcaccggggacgatattttggccaatgtTTC CAGTGAGAAGGGGCCCCAATGAGTCTGTCAGAAGGTGGTGTACTATGATA CAAATTAACTTCATACCTGGTCTTAGGTGTAAATGGGGCGTAAGCGAAAA CATCTTCCTCTCCTACGGAGAAATCACATCTTCCTTAAAATagaatcaaa taaaaagaatcttcaatacacgggttgcaaattTATATCAGTGTGGTCAG AACATGTGATTAGTCGGagaagttcacgtgattttattcccatattactt gctttacaacttacagctgataactttattagtgtcaataaattcgaacc aatcagaaataaatgtcatgtaNtaagaatttcaaaaagcgtgatttgtc ttcagacttttttgcaacctgtgtattattGTGGCTCAAATTATTTGATA CACGAAAGGAGCATAAAGTACTTGTCACAATACGACCGAGCGCCTTCCAA TATCGAGTTTttgtacagttgactctctctaattcgatctttataggacc aaaaattttcttcgaattagagaaagattcgacttacagagagtaattta aaccactttccagctaaggggaccaatattttagttcgaattacagaaag actCGAACAataaaggttcgaattagagtgaGTTGACTGTATGTGTGCTT TTCTTCAACGAAGacggttaaaggttttgttttttaataagagtggtatc gtttgcttacttgtCAATCTTAATttgcaagctttttcacattggattga cacggatgtggagcaagattggttagaaagaggaaaagaaaaacaatttt ttgcttatatcagtataacataacaataagtagacactgtcctgatatga aatatgtgtccgATATGAAACGGGAGCACTTATGcagaaataaaaccttt aactccAAATTTGTCTAGATCCAGATTAACTTacctttcttaaaattttG TTCTTTCCAGGCATGGAAACTATACCATCAAGGTGCTGAACGCGGCTTCT TCATGTCGGCAGCTCAACGATCTACAGAAAATGCAGAATCTAAACTTCGA GCACAACCTTGGTGGACCGTTGAACAATCTGGTTACGAAAAAGAGATTAG GTACCCTCATCTTCAACCTCCATGTTTTCTGATGAGAGCCTAATAACACT CTGGTATTCTCTGGCGcccatcagtaacgtaaataaagcttgGAATACAG GGGGACGACCATCCACGAGAAAAATTCCCACCAAAAGTCCTTCCATTAAG ATATTGTCTcttaaaataaatctaaatgCTCTGTTCGAGAAGGATTTTCA CTCAGAGTGTATTCTGagatatcaaaaaaataatggCAACTTATAATTTT TCCGCAGGAAGTTGGAATATTACTGGAAAACGATGCGTGatgaagcaaat aaaattttgaaacaaaacaaagacCGTTTCCCACTGGAAGACGAAGGTAT TTGTTGACTGCGCATTTATTTAGAAAATTATAACCACTCACAAATGCTGA AAGTAAGAAAATTTAGACATTTAGAAAACTAAAAACACCCAAAGGTTTAA AAATCTCTTCATAAGAGAAACGTGGAAGAGAAATTAAAGGATAAAGAAAC CTTTAAACAaccatattgggggggggtaCACTTGGGAAAAAAAGGGGtac ggggatgtgccgctggtcagggtacctttttcacctccgcatagggtcgc aaaaacaccaaaatagaaaagtcGGTCCCTCGTagataaccttttttttg agattttgggaaaaaagtagaacattttgagaaaatttgcgagatttagt cccattcagggtcacttttttcgcaaatttgagtcCCACGTAGGCCCCAT TTTTCTGACCACAGGTGAAACACCCCCTCCCCCAGGGTCATATACTCGAC AATTTCGATTTGTCTCACTCGGACCAGATTCTTGGCACTTcaacaaattt tccaaatcctcAAGATGTATTAAGATAAAGAATATCTATTATATCTATGC AGGGCTCTTAGATACAGGGGACTGGAGACAATTGACATTGGATCAACGTg gtcaacaaaacaaaaagaattgcCAACTTGTACCAAAGACGTGTGAGATC ATCAGTCAATTCAAGCAAGCTACTGGAAACATAAGAGGACAGGTTGGTTA ACATCTAACTCTAACATCTACGCCGTCTACCGCCCCATCCCCCCGCCCCC GGCTCGAAGACTGAGTGTGCGGACCCTGGGGGCCAACTACTAGTGGCATT GCAGTTGCCCAGGTTTcggaaaattatcaaatttcgAATTGTTTCAGGAA TCTTTACGAGTTAATTGAAACGAAATTCTAAAGATATAACTTTAagataa agttttcaaaatcaacttttctttgCAAAATGTTGATTTGTCTACTTCCA TGGTTTAGCTTCTTGGGGTAGAGGCCCGAGAtctggtttttattttatac atAAATGGCGAAATTAATTGCAACCGTTTTCTTAGGCATCAAATTTTGTT TGGTTTAATTGATCTTAATGCAACCTGTTAGAAGAACCNATTTAGAAAAT TATAACCACTCACAAATGCTGAAAGTAAGAAAATTTAGACATTTAGAAAA CTAAAAACACCCAAAGGTTTAAAAATCTCTTCATAAGAGAAACGTGGAAG AGAAATTAAAGGATAAAGAAACCTTTAAACAaccatattgggggggggta CACTTGGGAAAAAAAGGGGtacggggatgtgccgctggtcagggtacctt tttcacctccgcatagggtcgcaaaaacaccaaaatagaaaagtcGGTCC CTCGTagataaccttttttttgagattttgggaaaaaagtagaacatttt gagaaaatttgcgagatttagtcccattcagggtcacttttttcgcaaat ttgagtcCCACGTAGGCCCCATTTTTCTGACCACAGGTGAAACACCCCCT CCCCCAGGGTCATATACTCGACAATTTCGATTTGTCTCACTCGGACCAGA TTCTTGGCACTTcaacaaattttccaaatcctcAAGATGTATTAAGATAA AGAATATCTATTATATCTTTGCAGGGCTCTTAGATACAGGGGACTGGAGA CAATTGACATTGGATCAACGTggtcaacaaaacaaaaagaattgcCAACT TGTACCAAAGACGTGTGAGATCATCAGTCAATTCAAGCAAGCTACTGGAA ACATAAGAGGACAGGTTGGTTAACATCTAACTCTAACATCTACGCCGTCT ACCGCCCCATCCCCCCGCCCCCGGCTCGAAGACTGAGTGTGCGGACCCTG GGGGCCAACTACTAGTGGCATTGCAGTTGCCCAGGTTTcggaaaattatc aaatttcgAATTGTTTCAGGAATCTTTACGAGTTAATTGAAACGAAATTC TAAAGATATAACTTTAagataaagttttcaaaatcaacttttctttgCAA AATGTTGATTTGTCTACTTCCATGGTTTAGCTTCTTGGGGTAGAGGCCCG AGAtctggtttttattttatacatAAATGGCGAAATTAATTGCAACCGTT TTCTTAGGCATCAAATTTTGTTTGGTTTAATTGATCTTAATGTAACCTGT TAGAAGAACTCACAATGTCCAAAGCTCTGTCTGGTATAGACTTTTTGCTA ACGTCATCAATTTAATTTTgggttttttaattattcaacatgacatcctg aTTTACAAAAGGTCATTTTGTATAAaactgattttatttttttatttttt caaacaaaatttagatTAAATTTTCGATCATGACACCTGGCACACACGTA TGGCCGCATACTGGACCAACCAATTGTCGTTTGAGAGCACACTTGGGTTT AAGCATACCGAAAGGCGTTGAAATCCGGGTTGGCAGTGAAACTAGGtatg catttttgaagactatAAGTGTAAGAGAAAAATGCCATAAATGTATAGGA GTAAACCCTTATAGTAGGACCCGCGAATAAGGCCTAGAAAACATGTCATG GCCAAAAGAATGACATCACAGGCAAAACTCCTAAATCTgaaatgagtaaa aaattgacgatttttaTAAGTAGAATCTAAAGAAAATgtcttgagcaaat ttcttggtcttttcaaattttcgcaTTTAagtcgaggggtaaatcacttg aaaaaaggtgtacgatactttttgactttttgaattttcatttgactttt tgacttttttttaacttttatttgactttttgacttttttcaaacttcca ttttgactttttcccgacaaaaacgcccaccgccttcgGGCGCCTAAAAT TTCCCGcccaaatctgtccaaaaacgccaaccgcccataaattttgctcc acctatccgcccattcaagaaacttttttgactttttttttgactttttg tagaggtgtacgataatttttcgagtgatttacccctcgattTAAGTTGC ATAAATAATCCCAAAACTCAATATTAAGTCCTTGTTTCCTTGACAATAAC GTGAATTTAGGGTAAAAATTTAAGCACTAGGTCTAAAGAAAGACAGTGCC AAATGCCATCCATATTAGACGAGTCTATACTGATCTAGACTGTAAGGCAA ATGAAAAACAGCTGTTGGATACAGAGGCGTATTTAGGGTAGGTCAAGTAG GTCAAGTGACATAGTtccgagaaattgaaaaatatgaaaaattgttATAC AGGCTTTCTTATTCCTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNTTTTCAATTATGAATtatcaattatccccaagttaggctcac tccttttacaaaagtgccattttatgcttgagacgtatgtactaaatgtt aaatctagtataaattaggatcctaacctaagaatatgctgtaagaatat tttaggatgattttcccaaaaaagttaagaatatctatgttgaaatggat ttacaccattcttataaaaaaagcgtgtattatacCAGGATCATCATTGC CTAAATTTACgcgacccagctggcacacaacgttgtttcaacgtttatct aacgttcacaacgcccatataacgttagatgaacgttgaaataacgttgt gtgccagctggggaagaaaaaaagttttaactctGTAAACTATAAACGAG ACTGCTGAATAACAAAGAATCTTCTTACTTTTCATTCTAGGAGTTGGGAA AATGGCAAAGTATTGATTTTTGATGATTCCTTTGATCATGAAGTTTGGCA TCGTGGAACAGAATCAAGATTGATTTTGATAATCGATTTTTGGCATCCTG ATTTACCGTTATGGGAAAGACAAAGTTTAGCTCCTATTTAGATTTTCTTC TAAAGAactagattttatttttgaattctaatttttaactcaaatttccA TTGAGTTGTGAGGTTTCCTTAGTATTCAAATCAAGGACAAAACTATGTAC ACTAAGGACAACCAGGGTGTACTTGATAATCCCTAAATTTTTAAGAGTAA TTAGGTATAAACTATGGATAATCTGGAGCAGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021676XLOC_021676Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036702-exon-sc0001501-1491911889:1..167TCONS_00036702-exon-sc0001501-1491911889:1..167Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1510915933:1..167TCONS_00036702-exon-sc0001501-1510915933:1..167Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1575043694:1..167TCONS_00036702-exon-sc0001501-1575043694:1..167Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1491911889:3501..3685TCONS_00036702-exon-sc0001501-1491911889:3501..3685Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1510915933:3501..3685TCONS_00036702-exon-sc0001501-1510915933:3501..3685Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1575043694:3501..3685TCONS_00036702-exon-sc0001501-1575043694:3501..3685Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1491911889:5161..5300TCONS_00036702-exon-sc0001501-1491911889:5161..5300Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1510915933:5161..5300TCONS_00036702-exon-sc0001501-1510915933:5161..5300Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1575043694:5161..5300TCONS_00036702-exon-sc0001501-1575043694:5161..5300Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1491911889:5558..5646TCONS_00036702-exon-sc0001501-1491911889:5558..5646Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1510915933:5558..5646TCONS_00036702-exon-sc0001501-1510915933:5558..5646Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1575043694:5558..5646TCONS_00036702-exon-sc0001501-1575043694:5558..5646Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1491911889:7275..7414TCONS_00036702-exon-sc0001501-1491911889:7275..7414Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1510915933:7275..7414TCONS_00036702-exon-sc0001501-1510915933:7275..7414Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1575043694:7275..7414TCONS_00036702-exon-sc0001501-1575043694:7275..7414Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1491911889:7965..8095TCONS_00036702-exon-sc0001501-1491911889:7965..8095Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1510915933:7965..8095TCONS_00036702-exon-sc0001501-1510915933:7965..8095Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1575043694:7965..8095TCONS_00036702-exon-sc0001501-1575043694:7965..8095Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1491911889:11841..12183TCONS_00036702-exon-sc0001501-1491911889:11841..12183Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1510915933:11841..12183TCONS_00036702-exon-sc0001501-1510915933:11841..12183Clytia hemisphaericaexon
TCONS_00036702-exon-sc0001501-1575043694:11841..12183TCONS_00036702-exon-sc0001501-1575043694:11841..12183Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001501supercontigsc0001501:1..12183 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000642622 0 0 0 0.114752 0.0799889 0.144984 0.136651 0.0223999 0.0465923 0.0588297 0.0362854 0.0364406 0.324573 1.26318 0.0450547 0.188657 0.0486754 0.0879122 0.0582413 0.0706122 0.117939 0.0585024 0.0557257 0.0395217 0.0607458 0.554845 0.0293822 2.65763 6.41414
Blast
BLAST of TCONS_00036702 vs. Swiss-Prot (Human)
Match: ASPH (Aspartyl/asparaginyl beta-hydroxylase OS=Homo sapiens GN=ASPH PE=1 SV=3)

HSP 1 Score: 244.202 bits (622), Expect = 4.494e-84
Identity = 120/227 (52.86%), Postives = 158/227 (69.60%), Query Frame = 2
Query:  314 LGEAYTKSGRTDDAWKLYHQGAERGFFMSAAQRSTENAESKLRAQPWWTVEQSGYEKEIRKLEYYWKTMRDEANKILKQNKDRFPLEDEGLLDTGDWRQLTLDQRGQQNKKNCQLVPKTCEIISQFKQATGNIRGQIKFSIMTPGTHVWPHTGPTNCRLRAHLGLSIPK-GVEIRVGSETRSWENGKVLIFDDSFDHEVWHRGTESRLILIIDFWHPDLPLWERQSL 991
            LG+A  + G  + A+K Y  G +RG F S  QRS  N  + L+AQPWWT +++GY + ++ LE  WK +RDE   ++ + K  F  EDE L + GDW Q TL Q+G++N+  C+  PKTC ++ +F + TG  RGQIK+SIM PGTHVWPHTGPTNCRLR HLGL IPK G +IR  +ET++WE GKVLIFDDSF+HEVW   +  RLI I+D WHP+L   +R+SL
Sbjct:  531 LGDAMQRVGNKE-AYKWYELGHKRGHFASVWQRSLYNV-NGLKAQPWWTPKETGYTELVKSLERNWKLIRDEGLAVMDKAKGLFLPEDENLREKGDWSQFTLWQQGRRNENACKGAPKTCTLLEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPELTPQQRRSL 755          

HSP 2 Score: 86.6557 bits (213), Expect = 4.494e-84
Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 3
Query:    3 KQSERLIFFGKGRDSVNVLAKLAEHLPKDVDVMNKLATSYLIMGSNRKAFDIHKKVISVDPGNGIANANIGYILKALQKYQEAIPYLEAGIESEDPETNQAKF 311
            ++S+R  F G  R S+  L +L +  P D  + N L   YL++G N  A  ++++V+SV P +G A  + G+ILKA  K  E+IPYL+ GIES DP T+  +F
Sbjct:  425 RRSDRQQFLGHMRGSLLTLQRLVQLFPNDTSLKNDLGVGYLLIGDNDNAKKVYEEVLSVTPNDGFAKVHYGFILKAQNKIAESIPYLKEGIESGDPGTDDGRF 527          
The following BLAST results are available for this feature:
BLAST of TCONS_00036702 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASPH4.494e-8452.86Aspartyl/asparaginyl beta-hydroxylase OS=Homo sapi... [more]
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