XLOC_021676 (gene) - C. hemisphaerica

Overview


Name	XLOC_021676
Unique Name	XLOC_021676
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0001501:1..12183+

gene from alignment at sc0001501:1..12183+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_021676 ID=XLOC_021676|Name=XLOC_021676|organism=Clytia hemisphaerica|type=gene|length=12183bp|location=Sequence derived from alignment at sc0001501:1..12183+ (Clytia hemisphaerica)
TGAAACAATCTGAGCGGCTTATATTTTTTGGTAAAGGACGAGATTCAGTC
AACGTTTTAGCAAAGCTGGCAGAGCACCTACCGAAAGATGTGGATGTTAT
GAATAAATTGGCAACCTCGTATTTGATTATGGGCTCCAATCGTAAAGCAT
TTGATATTCACAAAAAGGTGAAACTCGTTAACTCCTTGACGTCCCACCAG
CAAAACCTTGTTCTCTCAGGAGATATTTTCGGCTCTCAGTAGTTTTGATT
GAGGActaaagagctttccaacggtaccaaACATTTAGGGTTTCGGTACC
ACCAAAGCTGAGATGGTTCAATTCAAAGTTAAAGCATtgaaaaagccatt
tttttgcttattgaGAACATCAAGGAgttaattattttgaaaatactaTA
TTTGAAGCCGTCAATGGGCCTgagagaaaatgaaatttccctAGGCCAGA
TAGATcccttttgattatttttgtccaatttttttgctagggggggggcg
tacgggtttgtcGGTGTGTCGGTATTGACCCTTTTTTGCGTCGGTGTTAC
GGTGTTTTAAGTAAAAAGTGTCGCTATTTCGGTGTTGGACATGCCTTGCG
GTGAcggtaaaattgattttttgggtcggtatttcggtgattCGAGAAAT
ACTGGCGGCGAATCTGCATATTTCAAAGGATCTCATAAAGTTTTTGAATC
TGCATTTTCAGCTATTGAATATCTTATCTATACAGGAATTGTAGCTATGA
CGAGTAGATGTAGCTATGACGAGTAGAATTGTAGCTATAATATAGCTATT
TTTGTAGCTACCCTGTCTCATcctctttttaaaattgtgtGCATAATGGT
GTTTCTTAACCACTTCTTTACGGGAAATGTGcactttatgaaaaaaatca
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NNAAGCCAGGTCGCTACTGAACAAGAGCTCTTTTGCGGCGCCCTTTTCTA
ACGGTGCTTTCGGCTAAGGTAGATTTACTTCTAATAACGTTCAAAAAGAT
CTCTTTTAGTTAAACAAGAGgacaaaaatgggaaaattttctccgtttgg
gcaaaccatggttgcgcctagCCTCCTCCATTACTTTATACATTCAGATA
TCTCTTTTGTTCCCTCGTTTTTGCaaagatcttttaaaaactttttaaat
gtttttcttcaaagtcATCTAAAGTAagcactaaagtaaaaatagcATTT
TAAACCCTTCAAAGTGTTCCCTAAAAATTCTTGATTTGTTTATCCACTAG
TCGTtgaaaaactgagctttaaAGATTTGAAACCCTTGAATCAGCGATAG
TTTTCTCcaagaaaaattgaactagtgcTCGTGATATTGAGCATTCGTAC
TAAGAATAAAAATCTTAAGCTTGCTCTAAAAGACGTCGGTGTCGGTGTTT
TAGGAAAGGTTTGTCGGTATTACggtgatttaagaaaaatctgtcggtat
ttcggtgttggcaaccctcgtacgccccccacaaTGAGGACAGATttcga
aaacaatgaaacataCAACCTGTTTTAAGCATATTATCCCATCCTTGCCT
CAGTGACCCGATGGAGGTTTCTCGTAAGTGGGGTTCGAATAAAGGAATTA
CTGTATATATCCAACAATAATGGAGAATATAATCCTCTTTCAATATCTTT
TGTTTTCGGCTAGAATATTGCTTCAATTCCAGTCTTTCAGTCTATACAGG
GACAAGTCAatctcgtccccgtgtattccaggctttatttgcGTTAACGA
TGGACGCTTGAGAATATCTGACGCTATCAGTAAACATAAAAGAAACCGAT
AACATGATAATGGTGTCAGCATTGTAAACTAACCCTCTTTTTATTCACAG
GTCATATCAGTGGACCCAGGGAATGGTATTGCAAACGCGAATATCGGTTA
CATCCTGAAAGCGCTACAGAAGTATCAAGAAGCTATTCCTTATCTGGAGG
CTGGAATTGAAAGCGAAGATCCGGAAACAAACCAAGCCAAATTTTCCTTG
GTGAGGCATACACAAAGTCTGGTCGAACAGATGACGTAAgtatttcaaat
gtttttcttttctttgaacTTCGTTCTTTATACTTCATTTGAGGATAGAG
TGGGTGAAAAAGCGACTCAAAAACCCAATGTACacagaaacaagaaaaaa
agactttttgacGAATATTAGTACTGAGGAGGGATACAAATCTTTATTTA
ACTACTAAGAAAACACCTTCGCTAGTGACATAGTCTTTTTTAAGCTTGAG
TGTCCATTTTATCGAAATTGCGTTTGATTACATATTCAAAAGGTCTATGc
atgttgaaaattgaaagtaaaacccTACTACAGACTATAGAGttgagtta
tttaaaaaagaagatacagacccccttctcacagacccggtagaaaactc
gatgggaattgatattcccatattttttatagctagggatttcaattcat
tttcttttcaagtcaaaatatTCAGTGGGGGGCGATAAGAAAAATAGCAT
AGCATTGGGGGAAAGTTtttcaccggggacgatattttggccaatgtTTC
CAGTGAGAAGGGGCCCCAATGAGTCTGTCAGAAGGTGGTGTACTATGATA
CAAATTAACTTCATACCTGGTCTTAGGTGTAAATGGGGCGTAAGCGAAAA
CATCTTCCTCTCCTACGGAGAAATCACATCTTCCTTAAAATagaatcaaa
taaaaagaatcttcaatacacgggttgcaaattTATATCAGTGTGGTCAG
AACATGTGATTAGTCGGagaagttcacgtgattttattcccatattactt
gctttacaacttacagctgataactttattagtgtcaataaattcgaacc
aatcagaaataaatgtcatgtaNtaagaatttcaaaaagcgtgatttgtc
ttcagacttttttgcaacctgtgtattattGTGGCTCAAATTATTTGATA
CACGAAAGGAGCATAAAGTACTTGTCACAATACGACCGAGCGCCTTCCAA
TATCGAGTTTttgtacagttgactctctctaattcgatctttataggacc
aaaaattttcttcgaattagagaaagattcgacttacagagagtaattta
aaccactttccagctaaggggaccaatattttagttcgaattacagaaag
actCGAACAataaaggttcgaattagagtgaGTTGACTGTATGTGTGCTT
TTCTTCAACGAAGacggttaaaggttttgttttttaataagagtggtatc
gtttgcttacttgtCAATCTTAATttgcaagctttttcacattggattga
cacggatgtggagcaagattggttagaaagaggaaaagaaaaacaatttt
ttgcttatatcagtataacataacaataagtagacactgtcctgatatga
aatatgtgtccgATATGAAACGGGAGCACTTATGcagaaataaaaccttt
aactccAAATTTGTCTAGATCCAGATTAACTTacctttcttaaaattttG
TTCTTTCCAGGCATGGAAACTATACCATCAAGGTGCTGAACGCGGCTTCT
TCATGTCGGCAGCTCAACGATCTACAGAAAATGCAGAATCTAAACTTCGA
GCACAACCTTGGTGGACCGTTGAACAATCTGGTTACGAAAAAGAGATTAG
GTACCCTCATCTTCAACCTCCATGTTTTCTGATGAGAGCCTAATAACACT
CTGGTATTCTCTGGCGcccatcagtaacgtaaataaagcttgGAATACAG
GGGGACGACCATCCACGAGAAAAATTCCCACCAAAAGTCCTTCCATTAAG
ATATTGTCTcttaaaataaatctaaatgCTCTGTTCGAGAAGGATTTTCA
CTCAGAGTGTATTCTGagatatcaaaaaaataatggCAACTTATAATTTT
TCCGCAGGAAGTTGGAATATTACTGGAAAACGATGCGTGatgaagcaaat
aaaattttgaaacaaaacaaagacCGTTTCCCACTGGAAGACGAAGGTAT
TTGTTGACTGCGCATTTATTTAGAAAATTATAACCACTCACAAATGCTGA
AAGTAAGAAAATTTAGACATTTAGAAAACTAAAAACACCCAAAGGTTTAA
AAATCTCTTCATAAGAGAAACGTGGAAGAGAAATTAAAGGATAAAGAAAC
CTTTAAACAaccatattgggggggggtaCACTTGGGAAAAAAAGGGGtac
ggggatgtgccgctggtcagggtacctttttcacctccgcatagggtcgc
aaaaacaccaaaatagaaaagtcGGTCCCTCGTagataaccttttttttg
agattttgggaaaaaagtagaacattttgagaaaatttgcgagatttagt
cccattcagggtcacttttttcgcaaatttgagtcCCACGTAGGCCCCAT
TTTTCTGACCACAGGTGAAACACCCCCTCCCCCAGGGTCATATACTCGAC
AATTTCGATTTGTCTCACTCGGACCAGATTCTTGGCACTTcaacaaattt
tccaaatcctcAAGATGTATTAAGATAAAGAATATCTATTATATCTATGC
AGGGCTCTTAGATACAGGGGACTGGAGACAATTGACATTGGATCAACGTg
gtcaacaaaacaaaaagaattgcCAACTTGTACCAAAGACGTGTGAGATC
ATCAGTCAATTCAAGCAAGCTACTGGAAACATAAGAGGACAGGTTGGTTA
ACATCTAACTCTAACATCTACGCCGTCTACCGCCCCATCCCCCCGCCCCC
GGCTCGAAGACTGAGTGTGCGGACCCTGGGGGCCAACTACTAGTGGCATT
GCAGTTGCCCAGGTTTcggaaaattatcaaatttcgAATTGTTTCAGGAA
TCTTTACGAGTTAATTGAAACGAAATTCTAAAGATATAACTTTAagataa
agttttcaaaatcaacttttctttgCAAAATGTTGATTTGTCTACTTCCA
TGGTTTAGCTTCTTGGGGTAGAGGCCCGAGAtctggtttttattttatac
atAAATGGCGAAATTAATTGCAACCGTTTTCTTAGGCATCAAATTTTGTT
TGGTTTAATTGATCTTAATGCAACCTGTTAGAAGAACCNATTTAGAAAAT
TATAACCACTCACAAATGCTGAAAGTAAGAAAATTTAGACATTTAGAAAA
CTAAAAACACCCAAAGGTTTAAAAATCTCTTCATAAGAGAAACGTGGAAG
AGAAATTAAAGGATAAAGAAACCTTTAAACAaccatattgggggggggta
CACTTGGGAAAAAAAGGGGtacggggatgtgccgctggtcagggtacctt
tttcacctccgcatagggtcgcaaaaacaccaaaatagaaaagtcGGTCC
CTCGTagataaccttttttttgagattttgggaaaaaagtagaacatttt
gagaaaatttgcgagatttagtcccattcagggtcacttttttcgcaaat
ttgagtcCCACGTAGGCCCCATTTTTCTGACCACAGGTGAAACACCCCCT
CCCCCAGGGTCATATACTCGACAATTTCGATTTGTCTCACTCGGACCAGA
TTCTTGGCACTTcaacaaattttccaaatcctcAAGATGTATTAAGATAA
AGAATATCTATTATATCTTTGCAGGGCTCTTAGATACAGGGGACTGGAGA
CAATTGACATTGGATCAACGTggtcaacaaaacaaaaagaattgcCAACT
TGTACCAAAGACGTGTGAGATCATCAGTCAATTCAAGCAAGCTACTGGAA
ACATAAGAGGACAGGTTGGTTAACATCTAACTCTAACATCTACGCCGTCT
ACCGCCCCATCCCCCCGCCCCCGGCTCGAAGACTGAGTGTGCGGACCCTG
GGGGCCAACTACTAGTGGCATTGCAGTTGCCCAGGTTTcggaaaattatc
aaatttcgAATTGTTTCAGGAATCTTTACGAGTTAATTGAAACGAAATTC
TAAAGATATAACTTTAagataaagttttcaaaatcaacttttctttgCAA
AATGTTGATTTGTCTACTTCCATGGTTTAGCTTCTTGGGGTAGAGGCCCG
AGAtctggtttttattttatacatAAATGGCGAAATTAATTGCAACCGTT
TTCTTAGGCATCAAATTTTGTTTGGTTTAATTGATCTTAATGTAACCTGT
TAGAAGAACTCACAATGTCCAAAGCTCTGTCTGGTATAGACTTTTTGCTA
ACGTCATCAATTTAATTTTgggttttttaattattcaacatgacatcctg
aTTTACAAAAGGTCATTTTGTATAAaactgattttatttttttatttttt
caaacaaaatttagatTAAATTTTCGATCATGACACCTGGCACACACGTA
TGGCCGCATACTGGACCAACCAATTGTCGTTTGAGAGCACACTTGGGTTT
AAGCATACCGAAAGGCGTTGAAATCCGGGTTGGCAGTGAAACTAGGtatg
catttttgaagactatAAGTGTAAGAGAAAAATGCCATAAATGTATAGGA
GTAAACCCTTATAGTAGGACCCGCGAATAAGGCCTAGAAAACATGTCATG
GCCAAAAGAATGACATCACAGGCAAAACTCCTAAATCTgaaatgagtaaa
aaattgacgatttttaTAAGTAGAATCTAAAGAAAATgtcttgagcaaat
ttcttggtcttttcaaattttcgcaTTTAagtcgaggggtaaatcacttg
aaaaaaggtgtacgatactttttgactttttgaattttcatttgactttt
tgacttttttttaacttttatttgactttttgacttttttcaaacttcca
ttttgactttttcccgacaaaaacgcccaccgccttcgGGCGCCTAAAAT
TTCCCGcccaaatctgtccaaaaacgccaaccgcccataaattttgctcc
acctatccgcccattcaagaaacttttttgactttttttttgactttttg
tagaggtgtacgataatttttcgagtgatttacccctcgattTAAGTTGC
ATAAATAATCCCAAAACTCAATATTAAGTCCTTGTTTCCTTGACAATAAC
GTGAATTTAGGGTAAAAATTTAAGCACTAGGTCTAAAGAAAGACAGTGCC
AAATGCCATCCATATTAGACGAGTCTATACTGATCTAGACTGTAAGGCAA
ATGAAAAACAGCTGTTGGATACAGAGGCGTATTTAGGGTAGGTCAAGTAG
GTCAAGTGACATAGTtccgagaaattgaaaaatatgaaaaattgttATAC
AGGCTTTCTTATTCCTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNTTTTCAATTATGAATtatcaattatccccaagttaggctcac
tccttttacaaaagtgccattttatgcttgagacgtatgtactaaatgtt
aaatctagtataaattaggatcctaacctaagaatatgctgtaagaatat
tttaggatgattttcccaaaaaagttaagaatatctatgttgaaatggat
ttacaccattcttataaaaaaagcgtgtattatacCAGGATCATCATTGC
CTAAATTTACgcgacccagctggcacacaacgttgtttcaacgtttatct
aacgttcacaacgcccatataacgttagatgaacgttgaaataacgttgt
gtgccagctggggaagaaaaaaagttttaactctGTAAACTATAAACGAG
ACTGCTGAATAACAAAGAATCTTCTTACTTTTCATTCTAGGAGTTGGGAA
AATGGCAAAGTATTGATTTTTGATGATTCCTTTGATCATGAAGTTTGGCA
TCGTGGAACAGAATCAAGATTGATTTTGATAATCGATTTTTGGCATCCTG
ATTTACCGTTATGGGAAAGACAAAGTTTAGCTCCTATTTAGATTTTCTTC
TAAAGAactagattttatttttgaattctaatttttaactcaaatttccA
TTGAGTTGTGAGGTTTCCTTAGTATTCAAATCAAGGACAAAACTATGTAC
ACTAAGGACAACCAGGGTGTACTTGATAATCCCTAAATTTTTAAGAGTAA
TTAGGTATAAACTATGGATAATCTGGAGCAGCC

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00036702	TCONS_00036702	Clytia hemisphaerica	transcript
TCONS_00036703	TCONS_00036703	Clytia hemisphaerica	transcript
TCONS_00036704	TCONS_00036704	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00036704-protein	TCONS_00036704-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0001501	supercontig	sc0001501:1..12183 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0	0	0	4.66	4.01	5.65	8.24	2.14	1.78	2.27	1.77	2.49	1.6	3.41	3.55	10.75	3.59	3.93	3.58	4.98	5.96	3.54	4.85	2.19	3.36	1.11	1.56	16.9	19.37

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XLOC_021676 (gene) - C. hemisphaerica