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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036698 ID=TCONS_00036698|Name=TCONS_00036698|organism=Clytia hemisphaerica|type=transcript|length=1086bp
TTAACCATTGCAACATTGGATGTCAACCATCGGTGTGCTATTTGCAACAG
GAATGTTATCGTGAAAGGTAAATTAGGTATTTGTAGCATTTGTGGTAAAG
GGCGGCTTGGACCCAAATTCTTTTATGCAAAGGTAACCCTCATGAAGAAA
GATGATGTAGTTATATCACTAGACATGCCACATGATGTGGTTCAATCGTT
TATAAAACTTTCAAATGCAGATGTTGAAGACATGGATGACATAGAAGACA
AATTGTTGGGAAGTGGCAGTGACTTCATTATGGAATATAATTCTGGAACT
AACACTGTCACAAGCATATCCATACAATGAGGGATCTTAGACTGAAAGAC
TTCATCTTTAATGTTTGTATAATTAGGCTAGCTGACATGATGTTTACAAT
TTAGTCTTTCATATTATACTTgattaaaatgacaaaagaggTATTTATCT
TTTCAGACTTAATCTCCACAATGATACAAGCCTTTTCATAAACAAACACA
ATTTCACCTGGCAAAAGTGACAATctattttaatttgtttttgtttttgg
tctattttttacaaaattgataacatttattttattttatttgctcACTT
GTAAATAACATTTGTAGGAGTAATTCTTTTGTTTGCAGGTTTCATTTATT
GACTATTTTTACTATAGGAGCTTTTGTTATTTTCACAGCAAAAACCAgag
ttaatatttttgtatctTAAAAAAGGAGACATGTAATTGCAAAGTTAATT
TTCCCAGTTTGAAACATGGAAAATGACTCTGGAATTCCAGTTCTCGTTTG
ACAGATTTATATTGAAGTTTAGAACATATCttatttttgtgtaaaaaagt
ACATTCTATAAAGATTTATCTAGGAAACGTATTTATATTCTATAAAAGAT
TTATATTAgtgattttaacagtttttatttaataggaaaatgtatttcct
taacttttgtttttacttGTTGAAGGTTAGACTTTACACTCTGATCCTGA
TTTTAAAGGCAACtcaaatttatgattttattttttattagacatgaaga
tatctttttacattttcatgAAGCATTCAAATTGTG Run BLAST on NCBI protein sequence of TCONS_00036698-protein >TCONS_00036698-protein ID=TCONS_00036698-protein|Name=TCONS_00036698-protein|organism=Clytia hemisphaerica|type=polypeptide|length=109bp
LTIATLDVNHRCAICNRNVIVKGKLGICSICGKGRLGPKFFYAKVTLMKK
DDVVISLDMPHDVVQSFIKLSNADVEDMDDIEDKLLGSGSDFIMEYNSGT
NTVTSISIQ Run BLAST on NCBI transcript from alignment at sc0001500:24827..25912 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036698 ID=TCONS_00036698|Name=TCONS_00036698|organism=Clytia hemisphaerica|type=transcript|length=1086bp|location=Sequence derived from alignment at sc0001500:24827..25912 (Clytia hemisphaerica)
CACAATTTGAATGCTTcatgaaaatgtaaaaagatatcttcatgtctaat
aaaaaataaaatcataaatttgaGTTGCCTTTAAAATCAGGATCAGAGTG
TAAAGTCTAACCTTCAACaagtaaaaacaaaagttaaggaaatacatttt
cctattaaataaaaactgttaaaatcacTAATATAAATCTTTTATAGAAT
ATAAATACGTTTCCTAGATAAATCTTTATAGAATGTacttttttacacaa
aaataaGATATGTTCTAAACTTCAATATAAATCTGTCAAACGAGAACTGG
AATTCCAGAGTCATTTTCCATGTTTCAAACTGGGAAAATTAACTTTGCAA
TTACATGTCTCCTTTTTTAagatacaaaaatattaactcTGGTTTTTGCT
GTGAAAATAACAAAAGCTCCTATAGTAAAAATAGTCAATAAATGAAACCT
GCAAACAAAAGAATTACTCCTACAAATGTTATTTACAAGTgagcaaataa
aataaaataaatgttatcaattttgtaaaaaatagaccaaaaacaaaaac
aaattaaaatagATTGTCACTTTTGCCAGGTGAAATTGTGTTTGTTTATG
AAAAGGCTTGTATCATTGTGGAGATTAAGTCTGAAAAGATAAATAcctct
tttgtcattttaatcAAGTATAATATGAAAGACTAAATTGTAAACATCAT
GTCAGCTAGCCTAATTATACAAACATTAAAGATGAAGTCTTTCAGTCTAA
GATCCCTCATTGTATGGATATGCTTGTGACAGTGTTAGTTCCAGAATTAT
ATTCCATAATGAAGTCACTGCCACTTCCCAACAATTTGTCTTCTATGTCA
TCCATGTCTTCAACATCTGCATTTGAAAGTTTTATAAACGATTGAACCAC
ATCATGTGGCATGTCTAGTGATATAACTACATCATCTTTCTTCATGAGGG
TTACCTTTGCATAAAAGAATTTGGGTCCAAGCCGCCCTTTACCACAAATG
CTACAAATACCTAATTTACCTTTCACGATAACATTCCTGTTGCAAATAGC
ACACCGATGGTTGACATCCAATGTTGCAATGGTTAA Coding sequence (CDS) from alignment at sc0001500:24827..25912 >TCONS_00036698 ID=TCONS_00036698|Name=TCONS_00036698|organism=Clytia hemisphaerica|type=CDS|length=330bp|location=Sequence derived from alignment at sc0001500:24827..25912 (Clytia hemisphaerica)
TCATTGTATGGATATGCTTGTGACAGTGTTAGTTCCAGAATTATATTCCA
TAATGAAGTCACTGCCACTTCCCAACAATTTGTCTTCTATGTCATCCATG
TCTTCAACATCTGCATTTGAAAGTTTTATAAACGATTGAACCACATCATG
TGGCATGTCTAGTGATATAACTACATCATCTTTCTTCATGAGGGTTACCT
TTGCATAAAAGAATTTGGGTCCAAGCCGCCCTTTACCACAAATGCTACAA
ATACCTAATTTACCTTTCACGATAACATTCCTGTTGCAAATAGCACACCG
ATGGTTGACATCCAATGTTGCAATGGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036698-exon-sc0001500-1491911889:24827..25912 | TCONS_00036698-exon-sc0001500-1491911889:24827..25912 | Clytia hemisphaerica | exon |
| TCONS_00036698-exon-sc0001500-1510915933:24827..25912 | TCONS_00036698-exon-sc0001500-1510915933:24827..25912 | Clytia hemisphaerica | exon |
| TCONS_00036698-exon-sc0001500-1575043694:24827..25912 | TCONS_00036698-exon-sc0001500-1575043694:24827..25912 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001500 | supercontig | sc0001500:24827..25912 . |
Blast
The following BLAST results are available for this feature:
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