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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036685 ID=TCONS_00036685|Name=TCONS_00036685|organism=Clytia hemisphaerica|type=transcript|length=1331bp
CGATGATCAATTTATCTGTATAGATGTCAATCGGGGTCATTTCAATTTCG
GTTTTCCAGTTTTGCCTTAAGTTTTTATACGTCTTACGTAAACAAGATGA
TGCTCTCGTTTTATTGGCTTAAAGGTTTTACGTATAACAAATCAGAATAA
TTATTTGAGCatatcaatttaaaaaatttcagagaATCAGACACATATCT
TTCACTAAGACTAAGCCTTAAGGCTAAATTGATTGTTGGTCTTACGGACC
AGCACTTAAAGCACAAAAAAAAATTTGCCGAATTTCGGGAAGATTGCTTC
AAAGCTAATTTTCGCAATACAAGACCTATACATACATTCATGTGCAAAAG
TTGCAAAAAAAACGTCGATTAAAATGTTCTGATTGGTTGAAAATTGCACA
TATAGACTTTTTTTTTCAAAGTTTTATAAGTATGAGGTGATCTTTGCGTG
TCTCACCTAATCATTTTCAATAGCCAATATTTTAATATTTTATTATTTTT
TATTAATTTTTGGTAGCTTTTCAATTTTTTCAGAATTATTTTGTTCTATT
CTATTATTCATTTTTTTGTCCATACCGATCCAAATTTTTTCGTGTTTTGC
TATCACTAACTTCTATTTACCGTGTGATAACGAAACATTTTCATGTGGAC
ACTTTCAATAGACGATATCGGCTTTCCGAAATTCTCCCCAAATGATTACC
CATGATGCATTGCGCAAAAAAAATTCACGGACAAAATTGACTTATTGAAT
TTTTTTGCGCAATGCATCATGGgtaatcattcggggagaatttcgttaag
ccgatatcgtctattgtttgaaatttaTGTGAAATTCCTGCTCAATTTTC
CATTTCATTTTCTACATACTGATCCATCCACCCATGCAGTTTTTTCCTAA
CACGGTAATTTTGttccaattttattttattgcgATACTTATAGCACGGT
TATTTTTCTCGACTTGCCGACCCTCTTTATAATTGAAACCTGCTTTATAC
GATATGTACAACAAAGTCAAACTGAAACTAATATCTTGGAAAGGAACTGT
CCCAGTTTTATGGACAATACTCGTTTACTTTATGAAAGGGGTAATGGTTT
CTGGTTGAAACCCATCTGTCGCTGAACTCTTTTATTTCCCTAGGGGTTTT
GCGAAACTCGTTTTCGACTCTAAGAAAGAGATTAAGCAAAATATAAAAAC
CAAGTGGTTCTTCttgtttgatgaaattttccTAATTCTTAGGTGAGAAG
TGCTTTTCGTATACGAATTCAAACTCCACAATAAAAATAACCACATTAAA
CCACAGTTTACCTGACGATGTGAAAAACCAG Run BLAST on NCBI transcript from alignment at sc0001496:31792..33122 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036685 ID=TCONS_00036685|Name=TCONS_00036685|organism=Clytia hemisphaerica|type=transcript|length=1331bp|location=Sequence derived from alignment at sc0001496:31792..33122 (Clytia hemisphaerica)
CTGGTTTTTCACATCGTCAGGTAAACTGTGGTTTAATGTGGTTATTTTTA
TTGTGGAGTTTGAATTCGTATACGAAAAGCACTTCTCACCTAAGAATTAg
gaaaatttcatcaaacaaGAAGAACCACTTGGTTTTTATATTTTGCTTAA
TCTCTTTCTTAGAGTCGAAAACGAGTTTCGCAAAACCCCTAGGGAAATAA
AAGAGTTCAGCGACAGATGGGTTTCAACCAGAAACCATTACCCCTTTCAT
AAAGTAAACGAGTATTGTCCATAAAACTGGGACAGTTCCTTTCCAAGATA
TTAGTTTCAGTTTGACTTTGTTGTACATATCGTATAAAGCAGGTTTCAAT
TATAAAGAGGGTCGGCAAGTCGAGAAAAATAACCGTGCTATAAGTATcgc
aataaaataaaattggaaCAAAATTACCGTGTTAGGAAAAAACTGCATGG
GTGGATGGATCAGTATGTAGAAAATGAAATGGAAAATTGAGCAGGAATTT
CACAtaaatttcaaacaatagacgatatcggcttaacgaaattctccccg
aatgattacCCATGATGCATTGCGCAAAAAAATTCAATAAGTCAATTTTG
TCCGTGAATTTTTTTTGCGCAATGCATCATGGGTAATCATTTGGGGAGAA
TTTCGGAAAGCCGATATCGTCTATTGAAAGTGTCCACATGAAAATGTTTC
GTTATCACACGGTAAATAGAAGTTAGTGATAGCAAAACACGAAAAAATTT
GGATCGGTATGGACAAAAAAATGAATAATAGAATAGAACAAAATAATTCT
GAAAAAATTGAAAAGCTACCAAAAATTAATAAAAAATAATAAAATATTAA
AATATTGGCTATTGAAAATGATTAGGTGAGACACGCAAAGATCACCTCAT
ACTTATAAAACTTTGAAAAAAAAAGTCTATATGTGCAATTTTCAACCAAT
CAGAACATTTTAATCGACGTTTTTTTTGCAACTTTTGCACATGAATGTAT
GTATAGGTCTTGTATTGCGAAAATTAGCTTTGAAGCAATCTTCCCGAAAT
TCGGCAAATTTTTTTTTGTGCTTTAAGTGCTGGTCCGTAAGACCAACAAT
CAATTTAGCCTTAAGGCTTAGTCTTAGTGAAAGATATGTGTCTGATtctc
tgaaattttttaaattgatatGCTCAAATAATTATTCTGATTTGTTATAC
GTAAAACCTTTAAGCCAATAAAACGAGAGCATCATCTTGTTTACGTAAGA
CGTATAAAAACTTAAGGCAAAACTGGAAAACCGAAATTGAAATGACCCCG
ATTGACATCTATACAGATAAATTGATCATCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036685-exon-sc0001496-1491911889:31792..33122 | TCONS_00036685-exon-sc0001496-1491911889:31792..33122 | Clytia hemisphaerica | exon |
| TCONS_00036685-exon-sc0001496-1510915933:31792..33122 | TCONS_00036685-exon-sc0001496-1510915933:31792..33122 | Clytia hemisphaerica | exon |
| TCONS_00036685-exon-sc0001496-1575043694:31792..33122 | TCONS_00036685-exon-sc0001496-1575043694:31792..33122 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001496 | supercontig | sc0001496:31792..33122 . |
Blast
The following BLAST results are available for this feature:
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