TCONS_00036669 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036669
Unique NameTCONS_00036669
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2955

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036669 ID=TCONS_00036669|Name=TCONS_00036669|organism=Clytia hemisphaerica|type=transcript|length=2955bp
CCACATGCATGTTCACTTCAATTAAAGCGAGTTTATCTGAACatgatttg
tttttttcttttcagaaaatgaagaagggcGTGGCAAGGGCGTGGCAAAC
GGCCACAAAGAAGGACGCAACGAAAGCGACGATCTCAAGAACCAGCTGTT
TCAAGGAAGACTACAAACcgtaaacaacaaaataaaaatcaaccCAAGAA
AAAAGAGAACAGAGAGCTCCTCAAGTCAAAGAAACCGCTCCCTTCAATCG
ATAAACTCGAGGAATACCTTAGTGTATATGCACCACCTGAATGGCTTTCC
AACAAAGATTGCAAGAAGTTTCCTTATTTCCCTCAAATTGGTGACGAGGT
ATATTATTTGAAACAAGGACATCACCTTTACGTCAAGAAAGTGGTCCAAC
ATAATGAATATGATATTCAAGAAAATCGACAAGCCTACCGAAGATACGAT
CTCTCTccGGCTGAACTGTGCAAATTAATTGGAATTCAATACGATGTGGG
ACCCCCAACAATGTGTTCCTTAAAACTAGAATTGATTGGTAAAAGGAAAT
CAACTGGCAACCGGCGAACGATAACTGTTCGTTTCCATGATATGCCCAAT
GTGGATGATTTTCTGGTTCTGAAACACATCTTTGAGGACTCGCTGAGCCA
AGGGTGGTCTGTCGGTGATCGTTTCCGTTGTATGATTGACGCCACTTGGT
ATTTTGGAACCATCATCGAAGTCAGTCCCCTCAATGAAGAGTTCATTACA
AGCTCATTCATGAGTCTCGTTGTCAGGTGGGATAATGATGACGAGGACCG
CGTCAGTCCTTGGGATCTGGAACCGATTCCTGATGACACGGATACGTATT
TTCtttgacttcattttttcaTGAGTTACACACTCTGAGGGTAACTTTCC
GGGACTTacgctggagtttttacaagctcttgtttaatttggttggtcgt
taagttaatttcattaccttttctaaagaatgcttcatctctattacttc
aaatggtCAATTAGtgaagtttcttataaaaactccagcttatcCCAACC
TTCCTCTATAGACTGTAGATTGAGTATATCAAAtactttctcttttattt
tcaacttaCAGTTGAGGAGGCACCGATAACATCCGAAGAtaagaaattgt
ttgaatatatCCCTTCAAGTGAAGACTGGCACTACGAATTTCCCGAACAC
CTTCGTCCACGAGCGCTTGAAGGATTGAAAGTGTTTTCAGCGTTAAAGGT
CGCCGCTCCCTTCGCTTATCCGGTGGATGTGCACACGTATCCAACTTATT
GGAGCACCATCGCTTTCCCGACTGACCTTCAAACCATCACTGAACGTATA
AGCAACAATTTCTACAGGTCATCACTACCCCAGCATACAAAAAACCGTTC
GAGACTTGGCGTTATGTTTTCCCATATCCTATCTACACGAAACATCTCTT
TTACACCGTCCTCAACCATCAGACACCTTTGTTCCACAAGATAGAGTTTA
TTGGGAAGAGAGGCTTCCACGCCGAACACTCATGGAAGATGGACCGTAAT
GACGTTTTTAAGGATATGGCTCGGAACCATCATTTTTATCCCACTCCTAA
ATACCACCACTTGGCTCCCGAGGGACCAATACAAGGATTTGCTGAGAGCA
AATTATCAGATAATAATAGAGATGACCAGCCACTTCAATCTTTACCTTTC
GAAAATGATGACTGTTTGGTGAATGCTGATTATTGCAAGCATGGTACAAC
TTTTCTCATGGCTGCTAAACttGAGCGCGAGGGTCTATACTCTCGTAGCC
TACTTATCAATCCTGATCTCAAAACAAGCTACGTGCCAATTCTTGCAAGC
TGTCAGCAGTTTAGTCTCAACAATTAACGTGCGTATTTACATCGGGCTTG
ATGAAAATTTCgtcaaaagttgtcattatcGTTGGGATGTTGAAACACAT
TTTTTACTAAGTGAAGATTTCAAATCGAGGAGATTGGATACCAAATATTT
TCGTCTTTTTCCTATACATTCAACCTATGCAAGATCTTGCCGCTTATGAA
GTAATGGTAGAAAGTCCCTGGTCTCTAAAGATATGGTATCAACAAGGTAT
TGTTGAGAAAAAGATGTTCGGTGTGCGAGAATCTTTTCTTCAAATACGGC
AACAACGGCTGTTGAAAGTCTgtttcaatataatctgcagcggagacaaa
aaaaacttttgatagaactcgaatgaaatagttttttttgcGTTTGTTGA
AAATATGATGAGGAGGGGGATATTATAAAACATTTATGGATTGCCTTAAT
GTCGACAAAACAATATTTCGAAAAGTACATTAGGTCGACTTCTGCGTTAG
GTCGACAAAAAACGTGTCGACCTAACGTTTGACGCTGATTTAAGAGTTAT
GTTTAAATCCCGGATCGGTGGCAGAGGTTTTAAAGCAAGCAAAACTACCA
AGTAGCCGCTAACAGCGCTCGGTCGGCTCAAGATCTGATTGGTTATttgt
aatttatgcaaaatattccaatttttggaaaatattcgcCCCGTGTTTtg
caactttttgaaaaaatatcaatttgcCGCGGAAAAGGCAAGCACGTTGG
GCAatccggctagttcgaaacacgggtcacgggtcacgggttacggggca
cggggtacggggcacggggcacggggtacggggcatacaatttacagacc
ggaaaaaatataacgatatcatgacgtataattcataacacgtactacat
aacacatataataatagtactaatactactagtatagtatgtctgaaaca
attatatactaatagtattatcatgaaaatttttaaataatatgtcaccc
acaaattttgacaaagtgatgttgaatgacaaaaatattgtcaaaatcat
gaaatataaggcctctgaaccaatttacagcaaaatgttttttcatactc
aatag
Run BLAST on NCBI

transcript from alignment at sc0001493:12471..19626-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036669 ID=TCONS_00036669|Name=TCONS_00036669|organism=Clytia hemisphaerica|type=transcript|length=7156bp|location=Sequence derived from alignment at sc0001493:12471..19626- (Clytia hemisphaerica)
CCACATGCATGTTCACTTCAATTAAAGCGAGTTTATCTGAACATGATTTG TTTTTTTCTTTTCAGAAAATGAAGAAGGGCGTGGCAAGGGCGTGGCAAAC GGCCACAAAGAAGGACGCAACGAAAGCGACGATCTCAAGAACCAGCTGTT TCAAGGAAGACTACAAACCGTAAACAACAAAATAAAAATCAACCCAAGAA AAAAGAGAACAGAGAGGTTTGAAATTCAAATTTTCCCGTTTTTATTCAAA TGTTCAAGTTTAGCCTTTTAGAGCTCAGTAGCGTAGCCAAAAGGGGGAGG GTGAGGTGGCGCAAAATTTGTGTAGGAGAGCAGATTTTCTCTCCTACACA AATTTTGCGCCCCTCTTGGCTACGCTTCTGGAGCCGAGATCGTCGATTTC GAAACTCATTGGTTGATTGTCCTGACAGTTTCATTTGTATTTTTTGCGTC TCTTTACTTTAGCTCCTCAAGTCAAAGAAACCGCTCCCTTCAATCGATAA ACTCGAGGAATACCTTAGTGTATATGCACCACCTGAATGGCTTTCCAACA AAGATTGCAAGAAGTTTCCTTATTTCCCTCAAATTGGTGACGAGGTAATG AAGAAATAATCATTATTTGTCGCTCTCAAAGAGTATATCTTTGTTTTTCT CAATAGACCTTGTATTCAATACACAGGTTGCAAAATGAAAGTCTGAAGAC AAATCATGCTTTTACATCACATTTATTTCTTATTGGCTCAAATTTATTGA CACTAATAAAGTTATCAGCTTTAACTTGTAAAGCAAGGTAACATGGGAAT AAAATCACGTGAACTTTGTATACGTAATCACATGTTTTGATCCTGCATTG ATATAATTTTGCAACCCGTGTATTCTGGCCGTCAACAACGCGATTCGAAT ATTTTGAGTTTCAAACGTTCGAAAATATAAGGCAAATTAGAAAACAACAT GACTCCAAAACTGTACATACTGTACAAATTTTTGAGCAGTTAGACTATCT AGTGCTTTAAAGGAACATGATATCTGTGTTTCACCACCCTTTCCTGCTTT CTCTTTTCATCGAGACACCAACTCTCTTTCTCTCTAACTTTTCATTTATC TTTAGGTATATTATTTGAAACAAGGACATCACCTTTACGTCAAGAAAGTG GTCCAACATAATGAATATGATATTCAAGAAAATCGACAAGCCTACCGAAG ATACGATCTCTCTGTAAGCCAACAGCTAACTTTCTCAACAGTTTTACATT CTAAATGGCACAAATTAAATCGTATCTTTTGAGTTGTTTCTGATTACTTA CAATTATCAAATGTAGTGTGAACATGTGGCTATAAAGACTCTCCTACAAT ACTTCTATGCTCCTACTTTCCTTTGAAACTTCATGAAAAAGATTTCCAAA GATTTTGAGTTTTTTACCAAAAGCAAATTATTTGGCTATCTTTTCTTTCA GATCTCTTTCAAATCATCCGTTAACACGTTTCTTGTTTTTTTTTCTCCAG CCGGCTGAACTGTGCAAATTAATTGGAATTCAATACGATGTGGGACCCCC AACAATGTGTTCCTTAAAACTAGGTAGGGTATGAAAGAATATAATCTTTC AATGTCTTTTTTCTGAAAAGCTTCTTGTTTACTTTTTACCTGGTTGTACT TGATTAAGCAACACTGTAATAGAACCATAAAAAGCTAATTGAATAATTTT ATAATTAAATACTAATCAGTGGCTCATTATTCAATTTACAGAATTGATTG GTAAAAGGAAATCAACTGGCAACCGGCGAACGATAACTGTTCGTTTCCAT GATATGCCCAATGTGGATGATTTTCTGGTTCTGAAACACATCTTTGAGGA CTCGCTGAGCCAAGGGTGGTCTGTCGGTAAGAAATACATTCTCCATAACA TCTAACTCGGGTCTTTTTAACATGTTTCCTCGCTTTTGGAATCTTTTAGA AAAATGGTATACTGAAGATTCGTCGGCAGCAAAGAGTGACGAAAAAATCA CTTGTTGACTAAATTATTTACCGACGAATTTTTCTCTTTTTCATTATTCC CTTAAATGCCTTTAGAATGCAAATATTTTACTTAATTTCTGCTAACCATT TTTACCCACATAAACAGGTGATCGTTTCCGTTGTATGATTGACGCCACTT GGTATTTTGGAACCATCATCGAAGTCAGTCCCCTCAATGAAGAGTTCATT ACAAGCTCATTCATGAGTCTCGTTGTCAGGTACGTATTTGTCAAAAAAGC TCGACACTTTTTAGGCCTTTACTTTTTATGATACATAAAAAATGGACCAA CTTTAATTAGATACAATGACTATAATCATATATGATTATATATACCGAAT GATAAAAAAAATCAAAATGAAATCCGTTTTTACGACATTTCGTTCTCTTT AAAGGACTAGGTCATCAGTCATTATATCGTTTTTACGATATTTGCATTAT TATATATTGAAAGTTTAAGTTTCATCCTCTTTATAGGTGGGATAATGATG ACGAGGACCGCGTCAGTCCTTGGGATCTGGAACCGATTCCTGATGACACG GATACGTATTTTCTTTGACTTCATTTTTTCATGAGTTACACACTCTGAGG GTAACTTTCCGGGACTTACGCTGGAGTTTTTACAAGCTCTTGTTTAATTT GGTTGGTCGTTAAGTTAATTTCATTACCTTTTCTAAAGAATGCTTCATCT CTATTACTTCAAATGGTCAATTAGTGAAGTTTCTTATAAAAACTCCAGCT TATCCCAACCTTCCTCTATAGACTGTAGATTGAGTATATCAAATACTTTC TCTTTTATTTTCAACTTACAGTTGAGGAGGCACCGATAACATCCGAAGAT AAGAAATTGTTTGAATATATCCCTTCAAGTGAAGACTGGCACTACGAATT TCCCGAACACCTTCGTCCACGAGCGCTTGAAGGTAAATTGCATAAAAAAG GGTGAAGCCTATGTAGTATACACAATATACAACTCCAGGCTTTTAGTTTT ACGCTCAAAACAAAGGAAGAAAGATAAGACGAAGCCTAGGTGAAACCCTC CTAAAATGTTACTTATTTTTAGATTGAAATTAGCGAACATGCTTTGTGCA ATATCTTTATTTCTTTTAGTGAACACAAAGCAATAAAAAGCAAGTTTGTG TTTTTTTCCACGCTTTATTTAGAAGTAGAAGCAATGACTTTACCTTCACT AAATTTTTGTATAACTATATTCTACTCTATTCAGGATTGAAAGTGTTTTC AGCGTTAAAGGTCGCCGCTCCCTTCGCTTATCCGGTGGATGTGCACACGT ATCCAACTTATTGGAGCACCATCGCTTTCCCGACTGACCTTCAAACCATC ACTGAACGTATAAGCAACAATTTCTACAGGTGTGTGAATTTCCTCATAGA CCTCCTTTTGATTCAAATTTTATTTTTTTAATGCCCAGATTACATCACAG CTTTAGCTATTTTGGTATCAGTGATTTCGAACGACAAATTGGTCTTGTGA TGGGAAATTGTTTCATTAGTTTTTTTTTTCAGTTTTGCATAAAGATAAAG GGCAAGGTTCTCTAAAAAGTGGCTGAAGCCGTTTTTTGCGGAAATTTTTT TTGGTCGTAAAAATCGGTAATTATAGTAATTATAACTTTTTCATTGATTG TATTACTAAAGGTCATCACTACCCCAGCATACAAAAAACCGTTCGAGACT TGGCGTTATGTTTTCCCATATCCTATCTACACGAAACATCTCTTTTACAC CGTCCTCAACCATCAGACACCTTTGTTCCACAAGATAGAGTTTATTGGGA AGAGAGGCTTCCACGGTGAGTGTCTTTATGAGACTGTTCATCTAACGTTT ACAGACCATCTAAAAAGAACGACAAATAACTATTAAAAAGCGACAAAAAG AACGACTAACCCTAACCCTAACGCTAACTATCAAACCCCAACCTTGGTTA GTGACTACCACCCCTAGGTACTTTACGTTATTTAACACCTAGCGGTTTAA AGAATGATAAATTACGCATGCGTCTCTATTTGGGTGAGCTGGAAACATTA GATGAACTAACTCTTATTACTCTTATTATTAGCTTATAAAATTTGTCGGA AATCTAATAAACTTTTAGGTGGCTCCTAGGCTTAGTTGAGTGTTAGATGT GACGTCATAGCTTTTGTATCATATGGGAGGTATGTTGAAACAATAAAAAA AGTCCAGGAACAACTTCAAATTGGCCCATAATCATTTAGCTGATAATGAA AAAAACACTTAAATTTTGAGCAAAATATTGGAAATACTAAATTATCTTTT TTCACCCGAAACAAATCGTTTTATAGAATATTTTCCTTTAAAAAAATTTC TTGTTAAACTCCCAGAAAGGAATTATTATTTGATGTGCTAAATAATCGAT AATGAGCAAAATAGCCGATAATTATAACTTTCCAATTGCCCCTATTTTTC TGAATTGGCATATTATTGGTCGAACGCACGCTCGAGCATGCGTAGTTAGA AAGAGTTTATTATTTCCCATTCTGGAGCTAATCAAGGGATAAAATTTGCA ATATACATTAATTGAATCATTAAGCCAATCTGAAGAGTTATAAAAGGTTA CTATCAATATTCTGCTCAAAAATCAAGTTTTTCTTCATTATCGGCTTATT GTCTATACAATCTGGGCTAATTTGCTTACTCTGAGCTAAGTAGACGATTT TCCGAGATGATGGGCTACTTTGAAGTTGTTCCTAAAGCTTGGTACTCACT TGTGTAGAAAATCGCATTTAAGTGCGCCTAAGTGCGTTTATCAGTTAGGC GCACTTAAACGCCATTTATGTACTCACTACAAAGTGATTTGAATGAAAGA GAGGGAAAAAGGAGTTAGGCGCACTTAAACGCGATGAAAAAATCCCCCTC TCTCTTCAAATTTCAAAAGAACTGAATAGTGTTTACACGCAGTGTCTTTA ATGATCACTCGATGTGCACCGTGCACAGGCTAATATTGACTGTACACAAA CCCAGTATTTACGGCTTATTTCAAAATTCGTTGCCGTAGAGGGTCTGTTT TCATTGTCTTTTCTCATTTGAGATTTTTCAAACTGACCACTGCGAAGGAG TGTTAGTGAGAGAAGGAAGACGATGAGAAAAGTGTTGCTATTTACAAATC ATACTTCATCTTAGAGGTCTCCGTACGGGAATCTTTTTATCAAACAGATA ATGCACACAGAGTGTACGACGAAGCGATAAACGTGAGATACACTCTGGTA CAGAGTAACATTGACTATATATAGCAAATATGCTCCTACTTTTTCAGCCG AACACTCATGGAAGATGGACCGTAATGACGTTTTTAAGGATATGGCTCGG AACCATCATTTTTATCCCACTCCTAAATACCACCACTTGGCTCCCGAGGG ACCAATACAAGGATTTGCTGAGAGCAAATTATCAGATAATAATAGAGATG ACCAGCCACTTCAATCTTTACCTTTCGAAAATGATGACTGTTTGGTGAAT GCTGATTATTGCAAGCATGGTACAACTTTTCTCATGGCTGCTAAACGTAA GTCGAGTTTTCTGTTAACCTTAAAAAAGATATGAATGATATTATATGGGC TAATTTATAATCGATCTCAAGTCATCTGGGAACCGAACTCAGATCTCTCG CTTGGAAGGCAAGGACGATCACCACTATTATACACATTCTACCAATTCTT TAACCAACCAAGTTGCTAAGTAAGAATTCAGCGCTCAAAATAGCCGATTG CATACGATAGCCTTTGACATAATAAGCATAAATTAGGTATCATATTTTTT GGGGTGGTGAAAGTAAATTTTTCAGAGAACGAGATAATATACCAAGCAAC CAAGCCTGACCCGAAAATTGGAGTTACTTATAAAAAGTGTGTAAGCCTCT TTTAATACACCGAAGAATAAGGAATATCACTTTTTAGTGAAAAAATTTTC ATTTTTAATCTTTTTGTTTAGTTGAGCGCGAGGGTCTATACTCTCGTAGC CTACTTATCAATCCTGATCTCAAAACAAGCTACGTGCCAATTCTTGCAAG CTGTCAGCAGTTTAGTCTCAACAATTAACGTGCGTATTTACATCGGGCTT GATGAAAATTTCGTCAAAAGTTGTCATTATCGTTGGGATGTTGAAACACA TTTTTTACTAAGTGAAGATTTCAAATCGAGGAGATTGGATACCAAATATT TTCGTCTTTTTCCTATACATTCAACCTATGCAAGATCTTGCCGCTTATGA AGTAATGGTAGAAAGTCCCTGGTCTCTAAAGATATGGTATCAACAAGGTA TTGTTGAGAAAAAGATGTTCGGTGTGCGAGAATCTTTTCTTCAAATACGG CAACAACGGCTGTTGAAAGTCTGTTTCAATATAATCTGCAGCGGAGACAA AAAAAACTTTTGATAGAACTCGAATGAAATAGTTTTTTTTGCGTTTGTTG AAAATATGATGAGGAGGGGGATATTATAAAACATTTATGGATTGCCTTAA TGTCGACAAAACAATATTTCGAAAAGTACATTAGGTCGACTTCTGCGTTA GGTCGACAAAAAACGTGTCGACCTAACGTTTGACGCTGATTTAAGAGTTA TGTTTAAATCCCGGATCGGTGGCAGAGGTTTTAAAGCAAGCAAAACTACC AAGTAGCCGCTAACAGCGCTCGGTCGGCTCAAGATCTGATTGGTTATTTG TAATTTATGCAAAATATTCCAATTTTTGGAAAATATTCGCCCCGTGTTTT GCAACTTTTTGAAAAAATATCAATTTGCCGCGGAAAAGGCAAGCACGTTG GGCAATCCGGCTAGTTCGAAACACGGGTCACGGGTCACGGGTTACGGGGC ACGGGGTACGGGGCACGGGGCACGGGGTACGGGGCATACAATTTACAGAC CGGAAAAAATATAACGATATCATGACGTATAATTCATAACACGTACTACA TAACACATATAATAATAGTACTAATACTACTAGTATAGTATGTCTGAAAC AATTATATACTAATAGTATTATCATGAAAATTTTTAAATAATATGTCACC CACAAATTTTGACAAAGTGATGTTGAATGACAAAAATATTGTCAAAATCA TGAAATATAAGGCCTCTGAACCAATTTACAGCAAAATGTTTTTTCATACT CAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021649XLOC_021649Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036669-exon-sc0001493-1575043694:19411..19626TCONS_00036669-exon-sc0001493-1575043694:19411..19626Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1575043694:19033..19164TCONS_00036669-exon-sc0001493-1575043694:19033..19164Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1575043694:18414..18521TCONS_00036669-exon-sc0001493-1575043694:18414..18521Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1575043694:18054..18126TCONS_00036669-exon-sc0001493-1575043694:18054..18126Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1575043694:17751..17885TCONS_00036669-exon-sc0001493-1575043694:17751..17885Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1575043694:17398..17509TCONS_00036669-exon-sc0001493-1575043694:17398..17509Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1575043694:16695..17140TCONS_00036669-exon-sc0001493-1575043694:16695..17140Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1575043694:16248..16392TCONS_00036669-exon-sc0001493-1575043694:16248..16392Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1575043694:15812..15965TCONS_00036669-exon-sc0001493-1575043694:15812..15965Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1575043694:14081..14329TCONS_00036669-exon-sc0001493-1575043694:14081..14329Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1575043694:12471..13655TCONS_00036669-exon-sc0001493-1575043694:12471..13655Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1510915933:19411..19626TCONS_00036669-exon-sc0001493-1510915933:19411..19626Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1510915933:19033..19164TCONS_00036669-exon-sc0001493-1510915933:19033..19164Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1510915933:18414..18521TCONS_00036669-exon-sc0001493-1510915933:18414..18521Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1510915933:18054..18126TCONS_00036669-exon-sc0001493-1510915933:18054..18126Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1510915933:17751..17885TCONS_00036669-exon-sc0001493-1510915933:17751..17885Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1510915933:17398..17509TCONS_00036669-exon-sc0001493-1510915933:17398..17509Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1510915933:16695..17140TCONS_00036669-exon-sc0001493-1510915933:16695..17140Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1510915933:16248..16392TCONS_00036669-exon-sc0001493-1510915933:16248..16392Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1510915933:15812..15965TCONS_00036669-exon-sc0001493-1510915933:15812..15965Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1510915933:14081..14329TCONS_00036669-exon-sc0001493-1510915933:14081..14329Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1510915933:12471..13655TCONS_00036669-exon-sc0001493-1510915933:12471..13655Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1491911889:19411..19626TCONS_00036669-exon-sc0001493-1491911889:19411..19626Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1491911889:19033..19164TCONS_00036669-exon-sc0001493-1491911889:19033..19164Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1491911889:18414..18521TCONS_00036669-exon-sc0001493-1491911889:18414..18521Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1491911889:18054..18126TCONS_00036669-exon-sc0001493-1491911889:18054..18126Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1491911889:17751..17885TCONS_00036669-exon-sc0001493-1491911889:17751..17885Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1491911889:17398..17509TCONS_00036669-exon-sc0001493-1491911889:17398..17509Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1491911889:16695..17140TCONS_00036669-exon-sc0001493-1491911889:16695..17140Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1491911889:16248..16392TCONS_00036669-exon-sc0001493-1491911889:16248..16392Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1491911889:15812..15965TCONS_00036669-exon-sc0001493-1491911889:15812..15965Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1491911889:14081..14329TCONS_00036669-exon-sc0001493-1491911889:14081..14329Clytia hemisphaericaexon
TCONS_00036669-exon-sc0001493-1491911889:12471..13655TCONS_00036669-exon-sc0001493-1491911889:12471..13655Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001493supercontigsc0001493:12471..19626 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.235436 0.123683 0 0.118108 3.50703 2.97763 2.61507 5.44047 1.94502 2.2215 2.31984 2.16465 5.31964 6.83037 0 0.203889 0 0.0881825 0.129992 0 0.262925 0 0.137444 0.234876 2.93678 12.5559 0 0.321271 0.138219 0.112375
Blast
BLAST of TCONS_00036669 vs. Swiss-Prot (Human)
Match: BRWD1 (Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens GN=BRWD1 PE=1 SV=4)

HSP 1 Score: 193.356 bits (490), Expect = 5.484e-50
Identity = 81/194 (41.75%), Postives = 130/194 (67.01%), Query Frame = 1
Query:  262 EYLSVYAPPEWLSNKDCKKFPYFPQIGDEVYYLKQGHHLYVKKVVQHNEYDIQENRQAYRRYDLSPAELCKLIGIQYDVGPPTMCSLKLELIGKRKSTGNRRTITVRFHDMPNVDDFLVLKHIFEDSLSQGWSVGDRFRCMIDATWYFGTIIEVSPLNEEFITSSFMSLVVRWDNDDEDRVSPWDLEPIPDDTD 843
            E+L  + PP W+++   +K P+ PQ+GDEV Y +QGH  Y++ V ++N Y++  N++ +R+ DL   EL K++GI+Y+VGPPT+C LKL  I         ++ ++R+HDMP+V DFLVL+  ++++  + W   DRFR +ID  W+FGT++   P   ++  S F   +VRWDN + +++SPWD+EPIPD+ D
Sbjct:  936 EHLYEFHPPVWITDTTLRKSPFVPQMGDEVIYFRQGHEAYIEAVRRNNIYELNPNKEPWRKMDLRDQELVKIVGIRYEVGPPTLCCLKLAFIDPATGKLMDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQSCDRFRSIIDDAWWFGTVLSQEPYQPQYPDSHFQCYIVRWDNTEIEKLSPWDMEPIPDNVD 1129          
The following BLAST results are available for this feature:
BLAST of TCONS_00036669 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BRWD15.484e-5041.75Bromodomain and WD repeat-containing protein 1 OS=... [more]
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