TCONS_00036652 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036652
Unique NameTCONS_00036652
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3170

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036652 ID=TCONS_00036652|Name=TCONS_00036652|organism=Clytia hemisphaerica|type=transcript|length=3170bp
GCTTACTGTAGCAAGCTATAGTTTTGGAGAGGGAAGAGAAacggaaaatt
ctttttaatcTGATCCTATAACTATTTGTGAAAGTTCCATCTTGGTCGCC
AAAagttagatttttaaaaaatatggcAGCTTGTAAACCAGAAGAGTATG
GTTTTGATGTGACGTTCATCTGGGAAGACGAAAAATCTGAAGTATCTCAA
GCAACAGAAGAAAATTCTGTACAGAACGCCAAAGAAATCAATAGAGACGA
TATCACTTGTGCAATATGTCTTTTGGTTTTGCGAGAACCAGTACAAGCCG
TGAAATGCGGGCATCGCTTTTGTGAAAAATGTATTGGGGAATTTCATCTT
CAGAATCCGGGAAAATGCCCCAAAGATTGGCAAGAGATTCAAGTTTTTCC
TGATGtggggaaaaaaagagaaatactCAGTCTGAAGATTCGATGTCCGA
ATTTTGTTGATGGATGTACGTGGCAAAATGAGCTCAGAGAGAAAGAGGTT
CACCTGAAAACTTGCGGTTTTGTGACCGTTCCTTGTGAATTAGATTGTGG
AGAATTCGTGCTCCGTAAAAACATAACAAATCACGTGGATACCGTATGTC
CAATGGTCTCCTCTTGTGAATACAAAGACTCAGGATGCTACTTTAAGGGC
ACCAAATTACAACTGGACAATCATATGGCGCAATCGGCCAACATGCATTT
GTCTTTTGAAATGAAAAGTGggattttcaaaatgaaaaaagaattcgATC
AAAAGTTAACAGCGAAAGATTTTGAAGCTCAACAAATGGAAAATGAATTC
ACTGAACAGTTGAAAATGAGGGATAACGAAATCGGAAAAGTCCGGGTAAA
ACTTGATGGAGACTTGAAAGTAAAAGACAAAATGATTCAAGCATTAGCGG
AGAGATTAAAAATTGCAGAAGAGAAATTGAAAGGGGTCGACGAAATGGAA
ATTAAAGTTCAGATGAACCAAACCGCCATCAAGTCcttggagaaaaaatt
gttgACGAAGTTGAAAACAACCGATGAAtctctttttgatttgaaagaag
AATTTATGCTGACTAAGCAGGAAgttgaaaaagtcaaagaacGGCATCAA
AAAGACGACCTTTTTAAAGCACCAGCTAGAGGTTTCGCTGTAAAAGAGGA
ATTAAATTCGACTATCTGCCCACCATCACTTTGTAACTATACATGGACCA
TCGAAAAATTCAAAGAGAATTTTGACGCTCCTAAATGGTCTTTTTATAAT
TCGCCAATGTTTTTTACTAAGCATGGTTATAAAGGATGTATTTCCTCCAG
GTTTCCCCTGACCATTCAAGACAACAAAAACACTTATGTGTCAGTTTTCT
TTAGGAATGAGGTGAGTCCTCATGACGAAACTCTAGAATGGCCAATGCCT
TGGAAATCGTTGACTTTCACTTTAATATTTAATGGAGTTGAAATTGCTCA
AACTGTGATAAGAAGTACAGATGAAGGAGGTAGATGGAAAGATTCATTTA
AAAGACCACTTAGGGATATATCTTCAAGTGTGGGCAATCAGTCAGCATTT
GAACATGTCTTATTGAACATAACTACGAATGATAGTGTTGCAATAAGATT
TGTAATGAATTGATCTTATACTCGGTAAATAGTGTAAACTACATTTGAAA
CAGACTATCCATTTCGAAGAAATGGTATTTATGGGTGGAGCCTTGCATTA
GTCGATCGAATTATTTATCGTCTTTAATCAACTTTTCAATTTAAGACCTC
CATTTAAACCTAAATGATCGATGGTAATTACAGTAATTACTTGACCTTAC
TCTTAGATTGACTTCGCCTTTGGATATTTTGGACGCATCGCGTTTTCGTC
GTCTTTTTAGAGTAAGTGAAGAGTTTATAAAGATTACAAATACTCTTTGG
ttccaaaaaattttcgaaaattaacaATCAGGGGTggttatttggaacct
aagaccatgttcagaaacgaaacggttccgaaacaagtgtgaacgtaaaa
attcgaaacgtcaaaaaagaagacgttacaaagcaaaacagatcgaaacg
gtttcgctccactatttttcatcggaacggaactgctctgTTTTCTctct
ccgaaacgttccgaaactaATATGAAtactctcgatccgtaacgaaaatc
acatcggagcgaaacggaactgtaacgtctgaacatggtctaagagTACA
CCTTTTACATCTGTGAAGCAAAGAATATCACCCACCTTGAAAGACCTTCC
ccggaggtcctatgaattaaccgatgtttgtccgttcgtctgctgttacc
agcttttctcttGGGATTTGCTCATCAGTTTTATCTAagtttttgcacaa
tgatacaaaattgCAATgcccggaaaaaaaatttttgtccgtaaaaatcg
gattttctcaCTATTGTACTGACTTTGTAAcaacttttttttggtaaaat
tatataaaatcattattttacaaaatatatCAAAGCTACCTATTTTACTT
GATATCGATTTGTTTTGTATTAAATTGTAGTTCTTCTATTTTTCATCCAA
ATCTTCGCTCCGTATAACATACACAGTCATGAATTTTCACGACTACAGCA
TTTTCTACACCAGATCAAAGTTCTCCAAAGCAAATTGTTTCGACTTCTAA
AAATTCTGTGGGAAAGATGTGTTCTCAATTGGAAAgtcgaatacacgttt
tttttttttaagaaactagttttaccaagcagcctcaatgtttcttaaaa
gattggccttttgagccttaaatgtttcttagatgtttctaaactttttg
aaataatcagcctatttttcatgcaaagattggaaggttctaaaaaacgg
agttaaaaatgttattttctcattctcagcctcagcatgtttcttagatg
tttcttagtttttaggcattctgagcctcatgtttcttaaaagtgtgttt
ctaaaaaaaaaaaacgtgtaagcaaGCTAGCTGTAACATAACATGAGCTG
TCAATTATTTTCTTAGCTGCTTTTCTTTAAAGGGAGAATGTTCTCCTTAA
AGCTATACTTTGACACAACATACGTATGTATACAATCTCgctaaaatgga
aatttttaatacaaatttccaaaaatgattgacattgaattattaaaatt
tttatactAGGGAAACATAA
Run BLAST on NCBI

protein sequence of TCONS_00036652-protein

>TCONS_00036652-protein ID=TCONS_00036652-protein|Name=TCONS_00036652-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
MAACKPEEYGFDVTFIWEDEKSEVSQATEENSVQNAKEINRDDITCAICL
LVLREPVQAVKCGHRFCEKCIGEFHLQNPGKCPKDWQEIQVFPDVGKKRE
ILSLKIRCPNFVDGCTWQNELREKEVHLKTCGFVTVPCELDCGEFVLRKN
ITNHVDTVCPMVSSCEYKDSGCYFKGTKLQLDNHMAQSANMHLSFEMKSG
IFKMKKEFDQKLTAKDFEAQQMENEFTEQLKMRDNEIGKVRVKLDGDLKV
KDKMIQALAERLKIAEEKLKGVDEMEIKVQMNQTAIKSLEKKLLTKLKTT
DESLFDLKEEFMLTKQEVEKVKERHQKDDLFKAPARGFAVKEELNSTICP
PSLCNYTWTIEKFKENFDAPKWSFYNSPMFFTKHGYKGCISSRFPLTIQD
NKNTYVSVFFRNEVSPHDETLEWPMPWKSLTFTLIFNGVEIAQTVIRSTD
EGGRWKDSFKRPLRDISSSVGNQSAFEHVLLNITTNDSVAIRFVMN
Run BLAST on NCBI

transcript from alignment at sc0001491:19884..34935+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036652 ID=TCONS_00036652|Name=TCONS_00036652|organism=Clytia hemisphaerica|type=transcript|length=15052bp|location=Sequence derived from alignment at sc0001491:19884..34935+ (Clytia hemisphaerica)
GCTTACTGTAGCAAGCTATAGTTTTGGAGAGGGAAGAGAAacggaaaatt ctttttaatcTGATCCTATAACTATTTGTGAAAGTTCCATCTTGGTCGCC AAAagttagatttttaaaaaatatggcAGCTTGTAAACCAGAAGAGTATG GTTTTGATGTGACGTTCATCTGGGAAGACGAAAAATCTGAAGTATCTCAA GCAACAGAAGAAAATTCTGTACAGAACGCCAAAGAAATCAATAGAGACGA TATCACTTGTGCAATATGTCTTTTGGTTTTGCGAGAACCAGTACAAGCCG TGAAATGCGGGCATCGCTTTTGTGAAAAATGTATTGGGGAATTTCATCTT CAGAAGTAAGTGTGAACAGTAGTCACGTCGAAATTTTCTATACTTTTGTT AGTCGTCATTTTCTTGTGTTCTATAAAAAGTTTTCGTTAAGGAAAGAATC TACTGCACTCAAATTAATTGCCTTGGAGAGTTTTTTATTTGGCACCATTC TTGCAAAAATGCATTATGCGGTGTGCCTGTATAAAAGAAGATCACAGTAT AATATTTTCATGATAATCATTTTATTCTAGTCCGGGAAAATGCCCCAAAG ATTGGCAAGAGATTCAAGTTTTTCCTGATGtggggaaaaaaagagaaata ctCAGTCTGAAGATTCGATGTCCGAATTTTGTTGATGGATGTACGTGGCA AAATGAGCTCAGAGAGAAAGAGGTTTGTAGGATTATTTCATTTGATATCA TCTGTACGCAGAAAGAAGAAGTTTTCAAAAGTGGGGATGGCTGTTCTAGA ATAAATGTTCAAAAACTACAGCAAATTTCTAATTTTAGGATCTGGCACTG TGTTAAAATCATAAAGACCCTCCACTTTACGCAAATTTTTACTTAATTGG ATACTTAAGTTAGGCTCTCATTAGGGCCAATTTATGTAGTTCAACCATAT CACCTTGGAGGGGGGAGGAATCTACTTGATgatatcatgaacatataaac gactggacatccatctcctttttctttttgtagaaaaggctgttagcttc gttgccgcctcgttaaaagcataaaatgaaaaatagattttgatgatata ccgcttgggaataccttgctaacaacgtcaaaacttcgacaaaagtctct gttgttctactcttctcaagtcgtttatctatatcatgataacaaagata acagaggcaaaatcatcgtcagcttgtcaaaactccgactaatatttcta aattttgacttaaaagtgtctactAATAGGAGTGGGCTATACAgggtcat ttttatttttttcgtcaaatcatgtcaaactaaattttctttagCTCCGT ATGGCATATCTAGGCAggatcaaaaagaatttttgagatattttaaatat aaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCC CCTTTTCTGGCCCCCTATTAGACTCATATAAAGTATGACAAAAAAATCCC CAATTTGACCTGGAAACcttaaaaatcattcaattttGCTGCAATTTGGT AAAAGTCCTCCTTGAATAacaataaaccagccgaggctggaaggtcagcc aatagagcttagctagatagctttaataagtgggttaacagatgtaagag atgNttgtagtttagtaccgtcaagttacacaacatgcacacaaccatct tgaagactttgctggtcgcaaatgataatcgaaagcaaaacttaagattc ataactatgcagggaagctcattttcccccattttgctttaaactccctt ttaattggtctatgaatttgggcaatcgctttaccgccttggcggaataa acacacaaccataatacataaattcaacagggcagcggagtagtaattaa tttcaactgggagtcctctcttctgtgccaagcactggcagtgtttttta aactttaaaacaatgttaaatgaagactaGATGAATCATGattgtgcaag ttgtgacgagagtgtgcatgttgtgtaacttgacggtataattcattaaa ttctagaaaccatttttcataactttctgcagtacACTTTCNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtaaaaattttaag atttcacaaTTTACACTGACAAATCTTCACCTGAAGAGGTAATGTGCCAA ATTTAAGCAGGAAAGAATGTTTTCTCGCCTTTATAGTCAAGCTTCCTCTT TTTTGCCTGCGTAAAGCCTTTGGGCTACgcccaaaatgtcaaaaattata tttctcgaataaatgttttgatataCTTTATTTCTGTCCCTGAGAAGTGA ATGTGCCAAATTTGAGCGGAATTCAATCACTGTGTGTCTCATTTCCAACA TAATTTGGGTAGTTGGGTAGATGGAAAAAGATTGATTTGAGGGCACAAAC CTCAGTCTACAAAAAGGCTTcccacattttttttcttcatttttgttcaa aaattctaTTTGATCCTGTCTACACTTATAATTTAGAccttaaaaaattt agtttgaaattttttgaaaaatcacccTGTATAGCCCACTCCtactaata attttagagagtgttacattctaatttcgattttCTTATGAAACAGGCTC Tcgactttggcaagctatttttttcaagtcataaaaaaaattatttgagt gacaaaagggattcaaaagtatacacgcagttgaatttctgcattttagg gttgaaaatgtcaataaaatatattgcaaacttataattcaaagaaatca aattatgacggaatattgtcggattttttcataccaattttgaaatacag gcggcaacgaagctcgcttcaaagagacaataaaagatagacgtccagtt gtttatatgttcatgatgaTATTCATaatgattttgatttataataaaat tttagaaagGGGAAGAGTCTAAAGGTAGAGGAGGTTGATCTATAACTGAG GTAGTAACCCCCTTCCGTACTCAGGCTATAAgccaattttcttatttagg gAGTCAATTTCTTTTGCAATAGATAATAACAAGCATTTATCATCGTTTTA GGTTCACCTGAAAACTTGCGGTTTTGTGACCGTTCCTTGTGAATTAGATT GTGGAGAATTCGTGCTCCGTAAAAACGTAAGAACGATTTGTTATCATTTG TAAGATATCAGAGAGACccggaaaacacgagttaaaggACCTTAAAAAAA CGTTATGGCGTCATTACGTTTTCTTAACTCGGGTTCTTCAGACCTTGATA TGTGAATACAAACCATGAAAACACTCGGGATAACTTTTTGTGAAGCCCTG AAAACCAGAGTTCGCCAAACCCTAGTcatttgtgacgtcataacttgaga gaaatgacgtcattttagaACATAACTTGATTTATGATAATAACTCGATT TGTTTGTGGTTACCTTAATCGTTCGAGTTAGTTAACTCGGTTGTTATGAA AGAATGAGTNTTTTAGAAGATAACTTGATTTATGATAATAACTCGATTTG TTTGTGGTTACCTTAATCGTTCGAGTTAGTTAACTCGGTTGTTACGAAAA TATGAgttatgaaaatttgttttccgGAATCTTTTAACCCAGTCTTTTTG GTGTATGTTTTTTTGAGTTTGTTAACTCGGATTTTCAAGAGGCCCGAAAG AACTGAtgttgaaaaacttgaaatatcTTACTAAGAGGGAGTTTTACTAC GAATCTTTAAAGGTGACCTCTTATGCAAATGTTCAAAAACGACAGTGGAA ATCTCATCTTAtgattctcaacttcagttgagctacaatctgacaatgtc tgtgtgtgtctgtctgtctgtcacaaaaactttagggcagccttgagact caaaaatgcttggatttagctgaaatttggcacacttgttccttgggtga atatctggggtacttttttcattttttgaaaattttgatttttggggcct ggggatgagtttttcgccaaaacgaggctaaaactttgaggcagcctgga gacttcaaaaattgttcattttgactgaaattttgcacacttgttccttg gctgaatatctggggttctacaattgggcctatgaaggcactgaagttga gcccagtgcgcgTGTTCGACTATTCTACAATTGTAGACATATTATTTTAG CTTATGGGTTCTTCTTTAGATAACAAATCACGTGGATACCGTATGTCCAA TGGTCTCCTCTTGTGAATACAAAGACTTAGGATGCTACTTTAAGGTACAT TTTTCTTATGTTGAAGCtgcttttttcaatttccaaaggaatgaaataaa aatttccgaATAAATCGAGAGACGAACTAAGCTGGCTAACTAAAAAAGAC TCTGCAAGGAGTCTTTCGTGGATAAAGTGCTACAGTATCtttattttgtc ttatttttcaAAGTAGCTGTACGGCAGCACTGTCCGGATTTTTGTCATCT AAGTAAGTACAGTAAAGTATAATAGGTAATAAGCCAGATATATTATTTGA AAAGCTAACGCAGTTTCTAAATTGTTGGGTTTCAGGGCACCAAATTACAA CTGGACAATCATATGGCACAATCGGCCAACATGCATTTGTCTCTTGAAAT GAAAAgtgagattttcaaaataaaaaaagaattcgaTCAAAAGTTGACAG CGAAAGATCTCGAAgctcaagaaatgaaaaataaatttgctgaACAGTTG AAAATGAGGGATAACGAAATCGGAAAAGTCCGGTTGGATCTTGATGGAGA CTTGAAAGCAAAAGACAAAATGATTCGAGCATTAGCGGAGCGGTTAAAAA TTGCAGAAGAGAAATTGAAAGGGGTCGACGCAATGGAAATTAAAGTTCAG ATGAACCAAACCACCATCAAGTCGTTGGAGAAAAAAATGCTGACGAAGTT GAAGGCAACCGATAAAtctatttttgatttgaaagaagAATTTATGCTGA CTAAGCAGGAAgttgaaaaagtcaaagaacGGAATCAAAAAGACGATCTT ATTAAAGCATCGGGTAGAGCTGTAAAAGAGGAATTAAATTTGGCTATCTG CGCACCATCACTATGTAACTATACATGGACTATCGAAAAATTCAAAGAGA AATTTGACGCTGCTATGAAATGGAGATATGATGATTCACCATATTTTTTT ACTAAGCATGGTTATAAAGGATGTATTTTCTCTGGGTTTCGCGAGACCAA TCTAGTCAACAAAAACACTTATGTGTCAGTTTTCTTTAAGAATGAGGTGG GACGTCATGACGATACTTTGGATTGGCCAATGCCTTGGAAATCATTGATT TTTACTCTAATCTTTAATGGAGTTGAAATTGCTCAAACTGTGACAAGAAG TACAGATGAAGGAGGTAGATGGAAAGATTCATTTAAAAGACCACTTGCGT GTACATCTTTCTATGTGGGAAACCCGTCAGCATTTGAACATGGCTTATTC AAGGACATAACTATGAATGATAGTGTTGCAATAAGATTTGAAATGAATTG ATCTTATACTCAGTAAATGGTGTAAACTACATTTGAAACAGACTATCCAT TTCGAAGAAATTGTATTTATGGGTGGAGCCTTGGATTAGTCGATCGAATT ATTTATCGTATTTAATCAACTTTTTAATTTAAGACCTCCATTTAAACCTA AATGATCGATGGTAATTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctttagaccccaat tttgtattttcgacaccctgggatggcctaatttcaaacttggagctccg agatcaaaagtttctaaaaggcggacacttctaattagcggacactatcc cctttccccgatggtgtccgctaattagaggttccactgtagtaatttaa tctttctttccAAATTCCAATTTTGTGATCTGGCGCTGTGTTAAAATCCT AAAGACCCTCCACTTTACGCAAAATTTTACTAAATTGGATACTTTAAGTC AGGCTCTCATTAGGGCCAATTTATGTAGTTAAACCAacatatacagggtg tccctaattaaagtatcgagtttgaacatgcgattgagtagaaaagtttg tgtgtgttatcgctaaaatataagaacgttctccatcacacaggcttatt acaaaaggtagttacaaccattgagtttcaagcccgaagggctagaggtc aatctctaacctttctcaggcaagaaaaattgaagctttaaaatatgcgc cgtatttttgatgacggattgaatctagcacttcctttgttttcgagtga tatatttttcaaaatgaagcggtaaattttggtttcaatctgtcatttgt gtaaaaaccaggcgggtcgctcaaggccgcgcaactttggtaggatttgt tggcttcaaatcctaccaagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaagagggagagcttaaaat acaattttgtgaacacgcacataaaactttctactcaatcgcatgttcaa actcgatactttaattagggacaccctgtaaacgactggacatccatctc ttttgtctttttgtagaaaaggccgttagcttcgttgccgcctcgttaaa agcataaaatgaaacaatagattttgatgatataccgcttgggaatacct tgctaacaacgtcaaaacttcgacaaaagtctctgttgttctactcttct caagtcgtttatctatatcataacgaagataacagaggcaaaatcatcgc cagcttgtcaaaactccgactaatatttccaaattttgacttaaaagtgt ctaataatNtcagcttgtcaaaactccgactaatatttctaaattttgac ttaaaagtgtctaataatttcagagagtgtcacattctaatttctatttt cttatgaaacaggctctcaactttggcaagctatttttttcaagtcataa aataaattatttgagtgacaaaagggatacaaaagtatacacgcagttga aattctgcattttagagttgaaaatgttaataaaatatattgcaaacttg tgaaaaaattcgaaaataatttttttgtacattaggagtaacgttcaagc tctatcaatccttttacctaaataattcaaggaaataaaattatgacgga atattgtcggatttttcataccaattttgaaatacagacgGCAACGaggc tcgcttcaaagagacaataaaagatagacgtccagttttttatatgttca tgatgaTATTTATAATGGTTTTGatttataataaaattttaaaaaggggA AGAGCAACCCCCTTCCGTACCTAAGCTTTAGgccaattttcttatttagg gAGTCAATTTCATTTTGCAATGAATAATAACAATcctttatcattgtttt aggTTCACTTGAAAACTTGCGGTTTTGTGACCGTTTCTTGTGAATTAGAT TGTGGAGAATTCGTCCTCCGTAAAAACGTAAGAACGATTTGTTATCATTT GTAAGATATCAGAGAGGCCtggaaaacacgagttaaaagaCCTCAAAAAG GCTATGACGTCATAACCCGGGTTTTCTTAACTCGGGTGTTTCAGACCTCG ATATGTGAATACAAACCATGAAAACACTCGGGATAACTTTTTGTGAGGCC CTGAAAACCGGAGTTCGGCAAACCCTAGTTACctatttgtgacgtcataa cttgagagaaatgacgtcattttagaAGATAACTTGATTTATGATAATAA CTCGATTTGTTTGTGGTTACCTTGATCGTTCGAGTTAGTTAACTCGGTTG TTATGAAAATATGAgttatgaaaatttgttttctgGAATCTTTTAACCCA GTCTTTTTGGTGTATGTTTTTGAAAACAGTCGAACGTGCACAACGCACTC TCCTTCTACAATTGTAGACATATTATTTTAGCTTATGGATTCTTCTTTAG ATAACAAATCACGTGGATACCGTATGTCCAATGGTCTCCTCTTGTGAATA CAAAGACTCAGGATGCTACTTTAAGGTAAATTTTTCTTATGTTGAAGCTG CTTTTTTCAATTTGCAAAGGaatatgaaatgaaaatttctaagCTGGCTA ACTGAGTCTTTCGTGAATAATGTGCTACAGTATCtttattttgtcttatt tttcaAAGTAGCTGTACGGCAGCACTATCCAGTTTTTTGTCATCTAAGTA AGTACAGTAAAGTATATAGGTAATAAGCCAGATACATTGTTTGAAAAGCT AACACAGTTTCTAAATTGTTGGGTTTCAGGGCACCAAATTACAACTGGAC AATCATATGGCGCAATCGGCCAACATGCATTTGTCTTTTGAAATGAAAAG TGggattttcaaaatgaaaaaagaattcgATCAAAAGTTAACAGCGAAAG ATTTTGAAGCTCAACAAATGGAAAATGAATTCACTGAACAGTTGAAAATG AGGGATAACGAAATCGGAAAAGTCCGGGTAAAACTTGATGGAGACTTGAA AGTAAAAGACAAAATGATTCAAGCATTAGCGGAGAGATTAAAAATTGCAG AAGAGAAATTGAAAGGGGTCGACGAAATGGAAATTAAAGTTCAGATGAAC CAAACCGCCATCAAGTCcttggagaaaaaattgttgACGAAGTTGAAAAC AACCGATGAAtctctttttgatttgaaagaagAATTTATGCTGACTAAGC AGGAAgttgaaaaagtcaaagaacGGCATCAAAAAGACGACCTTTTTAAA GCACCAGCTAGAGGTTTCGCTGTAAAAGAGGAATTAAATTCGACTATCTG CCCACCATCACTTTGTAACTATACATGGACCATCGAAAAATTCAAAGAGA ATTTTGACGCTCCTAAATGGTCTTTTTATAATTCGCCAATGTTTTTTACT AAGCATGGTTATAAAGGATGTATTTCCTCCAGGTTTCCCCTGACCATTCA AGACAACAAAAACACTTATGTGTCAGTTTTCTTTAGGAATGAGGTGAGTC CTCATGACGAAACTCTAGAATGGCCAATGCCTTGGAAATCGTTGACTTTC ACTTTAATATTTAATGGAGTTGAAATTGCTCAAACTGTGATAAGAAGTAC AGATGAAGGAGGTAGATGGAAAGATTCATTTAAAAGACCACTTAGGGATA TATCTTCAAGTGTGGGCAATCAGTCAGCATTTGAACATGTCTTATTGAAC ATAACTACGAATGATAGTGTTGCAATAAGATTTGTAATGAATTGATCTTA TACTCGGTAAATAGTGTAAACTACATTTGAAACAGACTATCCATTTCGAA GAAATGGTATTTATGGGTGGAGCCTTGCATTAGTCGATCGAATTATTTAT CGTCTTTAATCAACTTTTCAATTTAAGACCTCCATTTAAACCTAAATGAT CGATGGTAATTACAGTAATTACTTGACCTTACTCTTAGATTGACTTCGCC TTTGGATATTTTGGACGCATCGCGTTTTCGTCGTCTTTTTAGAGTAAGTG AAGAGTTTATAAAGATTACAAATACTCTTTGGttccaaaaaattttcgaa aattaacaATCAGGGGTggttatttggaacctaagaccatgttcagaaac gaaacggttccgaaacaagtgtgaacgtaaaaattcgaaacgtcaaaaaa gaagacgttacaaagcaaaacagatcgaaacggtttcgctccactatttt tcatcggaacggaactgctctgTTTTCTctctccgaaacgttccgaaact aATATGAAtactctcgatccgtaacgaaaatcacatcggagcgaaacgga actgtaacgtctgaacatggtctaagagTACACCTTTTACATCTGTGAAG CAAAGAATATCACCCACCTTGAAAGACCTTCCccggaggtcctatgaatt aaccgatgtttgtccgttcgtctgctgttaccagcttttctcttGGGATT TGCTCATCAGTTTTATCTAagtttttgcacaatgatacaaaattgCAATg cccggaaaaaaaatttttgtccgtaaaaatcggattttctcaCTATTGTA CTGACTTTGTAAcaacttttttttggtaaaattatataaaatcattattt tacaaaatatatCAAAGCTACCTATTTTACTTGATATCGATTTGTTTTGT ATTAAATTGTAGTTCTTCTATTTTTCATCCAAATCTTCGCTCCGTATAAC ATACACAGTCATGAATTTTCACGACTACAGCATTTTCTACACCAGATCAA AGTTCTCCAAAGCAAATTGTTTCGACTTCTAAAAATTCTGTGGGAAAGAT GTGTTCTCAATTGGAAAgtcgaatacacgttttttttttttaagaaacta gttttaccaagcagcctcaatgtttcttaaaagattggccttttgagcct taaatgtttcttagatgtttctaaactttttgaaataatcagcctatttt tcatgcaaagattggaaggttctaaaaaacggagttaaaaatgttatttt ctcattctcagcctcagcatgtttcttagatgtttcttagtttttaggca ttctgagcctcatgtttcttaaaagtgtgtttctaaaaaaaaaaaacgtg taagcaaGCTAGCTGTAACATAACATGAGCTGTCAATTATTTTCTTAGCT GCTTTTCTTTAAAGGGAGAATGTTCTCCTTAAAGCTATACTTTGACACAA CATACGTATGTATACAATCTCgctaaaatggaaatttttaatacaaattt ccaaaaatgattgacattgaattattaaaatttttatactAGGGAAACAT AA

Coding sequence (CDS) from alignment at sc0001491:19884..34935+

>TCONS_00036652 ID=TCONS_00036652|Name=TCONS_00036652|organism=Clytia hemisphaerica|type=CDS|length=7455bp|location=Sequence derived from alignment at sc0001491:19884..34935+ (Clytia hemisphaerica)
atggcAGCTTGTAAACCAGAAGAGTATGGTTTTGATGTGACGTTCATCTG
GGAAGACGAAAAATCTGAAGTATCTCAAGCAACAGAAGAAAATTCTGTAC
AGAACGCCAAAGAAATCAATAGAGACGATATCACTTGTGCAATATGTCTT
TTGGTTTTGCGAGAACCAGTACAAGCCGTGAAATGCGGGCATCGCTTTTG
TGAAAAATGTATTGGGGAATTTCATCTTCAGAATCCGGGAAAATGCCCCA
AAGATTGGCAAGAGATTCAAGTTTTTCCTGATGtggggaaaaaaagagaa
atactCAGTCTGAAGATTCGATGTCCGAATTTTGTTGATGGATGTACGTG
GCAAAATGAGCTCAGAGAGAAAGAGGTTCACCTGAAAACTTGCGGTTTTG
TGACCGTTCCTTGTGAATTAGATTGTGGAGAATTCGTGCTCCGTAAAAAC
ATAACAAATCACGTGGATACCGTATGTCCAATGGTCTCCTCTTGTGAATA
CAAAGACTCAGGATGCTACTTTAAGGGCACCAAATTACAACTGGACAATC
ATATGGCGCAATCGGCCAACATGCATTTGTCTTTTGAAATGAAAAGTGgg
attttcaaaatgaaaaaagaattcgATCAAAAGTTAACAGCGAAAGATTT
TGAAGCTCAACAAATGGAAAATGAATTCACTGAACAGTTGAAAATGAGGG
ATAACGAAATCGGAAAAGTCCGGGTAAAACTTGATGGAGACTTGAAAGTA
AAAGACAAAATGATTCAAGCATTAGCGGAGAGATTAAAAATTGCAGAAGA
GAAATTGAAAGGGGTCGACGAAATGGAAATTAAAGTTCAGATGAACCAAA
CCGCCATCAAGTCcttggagaaaaaattgttgACGAAGTTGAAAACAACC
GATGAAtctctttttgatttgaaagaagAATTTATGCTGACTAAGCAGGA
AgttgaaaaagtcaaagaacGGCATCAAAAAGACGACCTTTTTAAAGCAC
CAGCTAGAGGTTTCGCTGTAAAAGAGGAATTAAATTCGACTATCTGCCCA
CCATCACTTTGTAACTATACATGGACCATCGAAAAATTCAAAGAGAATTT
TGACGCTCCTAAATGGTCTTTTTATAATTCGCCAATGTTTTTTACTAAGC
ATGGTTATAAAGGATGTATTTCCTCCAGGTTTCCCCTGACCATTCAAGAC
AACAAAAACACTTATGTGTCAGTTTTCTTTAGGAATGAGGTGAGTCCTCA
TGACGAAACTCTAGAATGGCCAATGCCTTGGAAATCGTTGACTTTCACTT
TAATATTTAATGGAGTTGAAATTGCTCAAACTGTGATAAGAAGTACAGAT
GAAGGAGGTAGATGGAAAGATTCATTTAAAAGACCACTTAGGGATATATC
TTCAAGTGTGGGCAATCAGTCAGCATTTGAACATGTCTTATTGAACATAA
CTACGAATGATAGTGTTGCAATAAGATTTGTAATGAATTGAatggcAGCT
TGTAAACCAGAAGAGTATGGTTTTGATGTGACGTTCATCTGGGAAGACGA
AAAATCTGAAGTATCTCAAGCAACAGAAGAAAATTCTGTACAGAACGCCA
AAGAAATCAATAGAGACGATATCACTTGTGCAATATGTCTTTTGGTTTTG
CGAGAACCAGTACAAGCCGTGAAATGCGGGCATCGCTTTTGTGAAAAATG
TATTGGGGAATTTCATCTTCAGAATCCGGGAAAATGCCCCAAAGATTGGC
AAGAGATTCAAGTTTTTCCTGATGtggggaaaaaaagagaaatactCAGT
CTGAAGATTCGATGTCCGAATTTTGTTGATGGATGTACGTGGCAAAATGA
GCTCAGAGAGAAAGAGGTTCACCTGAAAACTTGCGGTTTTGTGACCGTTC
CTTGTGAATTAGATTGTGGAGAATTCGTGCTCCGTAAAAACATAACAAAT
CACGTGGATACCGTATGTCCAATGGTCTCCTCTTGTGAATACAAAGACTC
AGGATGCTACTTTAAGGGCACCAAATTACAACTGGACAATCATATGGCGC
AATCGGCCAACATGCATTTGTCTTTTGAAATGAAAAGTGggattttcaaa
atgaaaaaagaattcgATCAAAAGTTAACAGCGAAAGATTTTGAAGCTCA
ACAAATGGAAAATGAATTCACTGAACAGTTGAAAATGAGGGATAACGAAA
TCGGAAAAGTCCGGGTAAAACTTGATGGAGACTTGAAAGTAAAAGACAAA
ATGATTCAAGCATTAGCGGAGAGATTAAAAATTGCAGAAGAGAAATTGAA
AGGGGTCGACGAAATGGAAATTAAAGTTCAGATGAACCAAACCGCCATCA
AGTCcttggagaaaaaattgttgACGAAGTTGAAAACAACCGATGAAtct
ctttttgatttgaaagaagAATTTATGCTGACTAAGCAGGAAgttgaaaa
agtcaaagaacGGCATCAAAAAGACGACCTTTTTAAAGCACCAGCTAGAG
GTTTCGCTGTAAAAGAGGAATTAAATTCGACTATCTGCCCACCATCACTT
TGTAACTATACATGGACCATCGAAAAATTCAAAGAGAATTTTGACGCTCC
TAAATGGTCTTTTTATAATTCGCCAATGTTTTTTACTAAGCATGGTTATA
AAGGATGTATTTCCTCCAGGTTTCCCCTGACCATTCAAGACAACAAAAAC
ACTTATGTGTCAGTTTTCTTTAGGAATGAGGTGAGTCCTCATGACGAAAC
TCTAGAATGGCCAATGCCTTGGAAATCGTTGACTTTCACTTTAATATTTA
ATGGAGTTGAAATTGCTCAAACTGTGATAAGAAGTACAGATGAAGGAGGT
AGATGGAAAGATTCATTTAAAAGACCACTTAGGGATATATCTTCAAGTGT
GGGCAATCAGTCAGCATTTGAACATGTCTTATTGAACATAACTACGAATG
ATAGTGTTGCAATAAGATTTGTAATGAATTGAatggcAGCTTGTAAACCA
GAAGAGTATGGTTTTGATGTGACGTTCATCTGGGAAGACGAAAAATCTGA
AGTATCTCAAGCAACAGAAGAAAATTCTGTACAGAACGCCAAAGAAATCA
ATAGAGACGATATCACTTGTGCAATATGTCTTTTGGTTTTGCGAGAACCA
GTACAAGCCGTGAAATGCGGGCATCGCTTTTGTGAAAAATGTATTGGGGA
ATTTCATCTTCAGAATCCGGGAAAATGCCCCAAAGATTGGCAAGAGATTC
AAGTTTTTCCTGATGtggggaaaaaaagagaaatactCAGTCTGAAGATT
CGATGTCCGAATTTTGTTGATGGATGTACGTGGCAAAATGAGCTCAGAGA
GAAAGAGGTTCACCTGAAAACTTGCGGTTTTGTGACCGTTCCTTGTGAAT
TAGATTGTGGAGAATTCGTGCTCCGTAAAAACATAACAAATCACGTGGAT
ACCGTATGTCCAATGGTCTCCTCTTGTGAATACAAAGACTCAGGATGCTA
CTTTAAGGGCACCAAATTACAACTGGACAATCATATGGCGCAATCGGCCA
ACATGCATTTGTCTTTTGAAATGAAAAGTGggattttcaaaatgaaaaaa
gaattcgATCAAAAGTTAACAGCGAAAGATTTTGAAGCTCAACAAATGGA
AAATGAATTCACTGAACAGTTGAAAATGAGGGATAACGAAATCGGAAAAG
TCCGGGTAAAACTTGATGGAGACTTGAAAGTAAAAGACAAAATGATTCAA
GCATTAGCGGAGAGATTAAAAATTGCAGAAGAGAAATTGAAAGGGGTCGA
CGAAATGGAAATTAAAGTTCAGATGAACCAAACCGCCATCAAGTCcttgg
agaaaaaattgttgACGAAGTTGAAAACAACCGATGAAtctctttttgat
ttgaaagaagAATTTATGCTGACTAAGCAGGAAgttgaaaaagtcaaaga
acGGCATCAAAAAGACGACCTTTTTAAAGCACCAGCTAGAGGTTTCGCTG
TAAAAGAGGAATTAAATTCGACTATCTGCCCACCATCACTTTGTAACTAT
ACATGGACCATCGAAAAATTCAAAGAGAATTTTGACGCTCCTAAATGGTC
TTTTTATAATTCGCCAATGTTTTTTACTAAGCATGGTTATAAAGGATGTA
TTTCCTCCAGGTTTCCCCTGACCATTCAAGACAACAAAAACACTTATGTG
TCAGTTTTCTTTAGGAATGAGGTGAGTCCTCATGACGAAACTCTAGAATG
GCCAATGCCTTGGAAATCGTTGACTTTCACTTTAATATTTAATGGAGTTG
AAATTGCTCAAACTGTGATAAGAAGTACAGATGAAGGAGGTAGATGGAAA
GATTCATTTAAAAGACCACTTAGGGATATATCTTCAAGTGTGGGCAATCA
GTCAGCATTTGAACATGTCTTATTGAACATAACTACGAATGATAGTGTTG
CAATAAGATTTGTAATGAATTGAatggcAGCTTGTAAACCAGAAGAGTAT
GGTTTTGATGTGACGTTCATCTGGGAAGACGAAAAATCTGAAGTATCTCA
AGCAACAGAAGAAAATTCTGTACAGAACGCCAAAGAAATCAATAGAGACG
ATATCACTTGTGCAATATGTCTTTTGGTTTTGCGAGAACCAGTACAAGCC
GTGAAATGCGGGCATCGCTTTTGTGAAAAATGTATTGGGGAATTTCATCT
TCAGAATCCGGGAAAATGCCCCAAAGATTGGCAAGAGATTCAAGTTTTTC
CTGATGtggggaaaaaaagagaaatactCAGTCTGAAGATTCGATGTCCG
AATTTTGTTGATGGATGTACGTGGCAAAATGAGCTCAGAGAGAAAGAGGT
TCACCTGAAAACTTGCGGTTTTGTGACCGTTCCTTGTGAATTAGATTGTG
GAGAATTCGTGCTCCGTAAAAACATAACAAATCACGTGGATACCGTATGT
CCAATGGTCTCCTCTTGTGAATACAAAGACTCAGGATGCTACTTTAAGGG
CACCAAATTACAACTGGACAATCATATGGCGCAATCGGCCAACATGCATT
TGTCTTTTGAAATGAAAAGTGggattttcaaaatgaaaaaagaattcgAT
CAAAAGTTAACAGCGAAAGATTTTGAAGCTCAACAAATGGAAAATGAATT
CACTGAACAGTTGAAAATGAGGGATAACGAAATCGGAAAAGTCCGGGTAA
AACTTGATGGAGACTTGAAAGTAAAAGACAAAATGATTCAAGCATTAGCG
GAGAGATTAAAAATTGCAGAAGAGAAATTGAAAGGGGTCGACGAAATGGA
AATTAAAGTTCAGATGAACCAAACCGCCATCAAGTCcttggagaaaaaat
tgttgACGAAGTTGAAAACAACCGATGAAtctctttttgatttgaaagaa
gAATTTATGCTGACTAAGCAGGAAgttgaaaaagtcaaagaacGGCATCA
AAAAGACGACCTTTTTAAAGCACCAGCTAGAGGTTTCGCTGTAAAAGAGG
AATTAAATTCGACTATCTGCCCACCATCACTTTGTAACTATACATGGACC
ATCGAAAAATTCAAAGAGAATTTTGACGCTCCTAAATGGTCTTTTTATAA
TTCGCCAATGTTTTTTACTAAGCATGGTTATAAAGGATGTATTTCCTCCA
GGTTTCCCCTGACCATTCAAGACAACAAAAACACTTATGTGTCAGTTTTC
TTTAGGAATGAGGTGAGTCCTCATGACGAAACTCTAGAATGGCCAATGCC
TTGGAAATCGTTGACTTTCACTTTAATATTTAATGGAGTTGAAATTGCTC
AAACTGTGATAAGAAGTACAGATGAAGGAGGTAGATGGAAAGATTCATTT
AAAAGACCACTTAGGGATATATCTTCAAGTGTGGGCAATCAGTCAGCATT
TGAACATGTCTTATTGAACATAACTACGAATGATAGTGTTGCAATAAGAT
TTGTAATGAATTGAatggcAGCTTGTAAACCAGAAGAGTATGGTTTTGAT
GTGACGTTCATCTGGGAAGACGAAAAATCTGAAGTATCTCAAGCAACAGA
AGAAAATTCTGTACAGAACGCCAAAGAAATCAATAGAGACGATATCACTT
GTGCAATATGTCTTTTGGTTTTGCGAGAACCAGTACAAGCCGTGAAATGC
GGGCATCGCTTTTGTGAAAAATGTATTGGGGAATTTCATCTTCAGAATCC
GGGAAAATGCCCCAAAGATTGGCAAGAGATTCAAGTTTTTCCTGATGtgg
ggaaaaaaagagaaatactCAGTCTGAAGATTCGATGTCCGAATTTTGTT
GATGGATGTACGTGGCAAAATGAGCTCAGAGAGAAAGAGGTTCACCTGAA
AACTTGCGGTTTTGTGACCGTTCCTTGTGAATTAGATTGTGGAGAATTCG
TGCTCCGTAAAAACATAACAAATCACGTGGATACCGTATGTCCAATGGTC
TCCTCTTGTGAATACAAAGACTCAGGATGCTACTTTAAGGGCACCAAATT
ACAACTGGACAATCATATGGCGCAATCGGCCAACATGCATTTGTCTTTTG
AAATGAAAAGTGggattttcaaaatgaaaaaagaattcgATCAAAAGTTA
ACAGCGAAAGATTTTGAAGCTCAACAAATGGAAAATGAATTCACTGAACA
GTTGAAAATGAGGGATAACGAAATCGGAAAAGTCCGGGTAAAACTTGATG
GAGACTTGAAAGTAAAAGACAAAATGATTCAAGCATTAGCGGAGAGATTA
AAAATTGCAGAAGAGAAATTGAAAGGGGTCGACGAAATGGAAATTAAAGT
TCAGATGAACCAAACCGCCATCAAGTCcttggagaaaaaattgttgACGA
AGTTGAAAACAACCGATGAAtctctttttgatttgaaagaagAATTTATG
CTGACTAAGCAGGAAgttgaaaaagtcaaagaacGGCATCAAAAAGACGA
CCTTTTTAAAGCACCAGCTAGAGGTTTCGCTGTAAAAGAGGAATTAAATT
CGACTATCTGCCCACCATCACTTTGTAACTATACATGGACCATCGAAAAA
TTCAAAGAGAATTTTGACGCTCCTAAATGGTCTTTTTATAATTCGCCAAT
GTTTTTTACTAAGCATGGTTATAAAGGATGTATTTCCTCCAGGTTTCCCC
TGACCATTCAAGACAACAAAAACACTTATGTGTCAGTTTTCTTTAGGAAT
GAGGTGAGTCCTCATGACGAAACTCTAGAATGGCCAATGCCTTGGAAATC
GTTGACTTTCACTTTAATATTTAATGGAGTTGAAATTGCTCAAACTGTGA
TAAGAAGTACAGATGAAGGAGGTAGATGGAAAGATTCATTTAAAAGACCA
CTTAGGGATATATCTTCAAGTGTGGGCAATCAGTCAGCATTTGAACATGT
CTTATTGAACATAACTACGAATGATAGTGTTGCAATAAGATTTGTAATGA
ATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021635XLOC_021635Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036652-exon-sc0001491-1491911889:19884..20238TCONS_00036652-exon-sc0001491-1491911889:19884..20238Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1510915933:19884..20238TCONS_00036652-exon-sc0001491-1510915933:19884..20238Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1575043694:19884..20238TCONS_00036652-exon-sc0001491-1575043694:19884..20238Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1491911889:20464..20605TCONS_00036652-exon-sc0001491-1491911889:20464..20605Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1510915933:20464..20605TCONS_00036652-exon-sc0001491-1510915933:20464..20605Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1575043694:20464..20605TCONS_00036652-exon-sc0001491-1575043694:20464..20605Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1491911889:25285..25359TCONS_00036652-exon-sc0001491-1491911889:25285..25359Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1510915933:25285..25359TCONS_00036652-exon-sc0001491-1510915933:25285..25359Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1575043694:25285..25359TCONS_00036652-exon-sc0001491-1575043694:25285..25359Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1491911889:32084..32158TCONS_00036652-exon-sc0001491-1491911889:32084..32158Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1510915933:32084..32158TCONS_00036652-exon-sc0001491-1510915933:32084..32158Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1575043694:32084..32158TCONS_00036652-exon-sc0001491-1575043694:32084..32158Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1491911889:32413..34935TCONS_00036652-exon-sc0001491-1491911889:32413..34935Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1510915933:32413..34935TCONS_00036652-exon-sc0001491-1510915933:32413..34935Clytia hemisphaericaexon
TCONS_00036652-exon-sc0001491-1575043694:32413..34935TCONS_00036652-exon-sc0001491-1575043694:32413..34935Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036652-proteinTCONS_00036652-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001491supercontigsc0001491:19884..34935 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.119709 0 0 0 1.90292 1.2075 0.819003 0.90908 0.349993 0.421731 0.320761 0.211443 1.12176 0.948777 0.138854 0.102091 0 0 0.344237 0.128933 0.360287 0.29233 0.319426 0.471834 0.789726 2.31972 0.286403 0.18761 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR008974TRAF-like
IPR001293Znf_TRAF
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Blast
BLAST of TCONS_00036652 vs. Swiss-Prot (Human)
Match: TRAF4 (TNF receptor-associated factor 4 OS=Homo sapiens GN=TRAF4 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.459e-22
Identity = 57/176 (32.39%), Postives = 89/176 (50.57%), Query Frame = 3
Query:  252 ITCAICLLVLREPVQAVKCGHRFCEKCIGEFHLQNPGKCPKDWQEI---QVFPDVGKKREILSLKIRCPNFVDGCTWQNELREKEVHLKTCGFVTVPCELDCGEFVLRKNITNHVDTVCPMVS-SCEYKDSGCYFKGTKLQLDNHMAQSANMHLSFEMKSGIFKMKKEFDQKLTAK 767
            + C +C   +REPVQ   CGHRFC+ C+ EF  +   KCP+D   +   +++PD   + ++L L IRC +  +GC W   LR  + HL TC F  +PC   C   + R+++  H+   CP     CE+   GC F G   +    M    +++   E K G   M++   Q  T++
Sbjct:   16 LLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYPDPELEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CGCDFSGEAYESHEGMCPQESVYC--ENKCGARMMRRLLAQHATSE 187          
The following BLAST results are available for this feature:
BLAST of TCONS_00036652 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF47.459e-2232.39TNF receptor-associated factor 4 OS=Homo sapiens G... [more]
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