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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036637 ID=TCONS_00036637|Name=TCONS_00036637|organism=Clytia hemisphaerica|type=transcript|length=794bp
ctttttgacttaAACTTAATATAAATTTCAATATCTATCTTTTCAGGtcc
taataaaaaaataaaatcaattaagTAACTGAAATGTCACATGCTTTGGA
GATGTTCATGTATGATCAATTTCTTTTGGGAATTTTGGAATTTATGGATA
TCCTACACCAGTTTTGGTATCCTACACCATCTTTGTATTGAAAACGATTA
TGTGTGTCAAATGCACCTACCTTTTTCATGGCAgctatatttttcaactt
gGAGGCATATAATTATAGACTGAGTGAGATCAAtagaattattttcaatt
ttggtttaACTAATTTAACTGATATTATGGTGTTTGTCATGACCACAGCT
TTTGTTTTAAACAATGGTCAACAATTTGGGATTGAAAGTATGTTTATCCA
GCCATATAGATCGAATCAACTTGAGTGGCAGTGGATTATGGTAGATCATA
ATGATTGTGTAATGGAGTAATTTTCCTCCGTTTAATGTGTGTAATCTAGA
AGTCCAAGTGCAGGCCTGGTAATAGTGCGAAATATGATGTTTTACGCACG
TCTAAGAAAATGGAACGTGTCGGTTTCGTAGCGAGCACAGTTGACATTGG
ATCGGTATGTTTTTGCACAGCTTAAGTATTATTATTAACTGATAATGATA
AAGTTTTTGTCATAAAGTGCAGTTTGTAGTTTGAACTAACCAAATCTTTT
TAAATCGAATGAATAGTACTACTATTATTTTCATAATAAATGTTTCATTG
ATTAGAACTAAAAATGTCTCAAAAAAGAGCTAAAGGTTAATATT Run BLAST on NCBI transcript from alignment at sc0001487:48895..49962+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036637 ID=TCONS_00036637|Name=TCONS_00036637|organism=Clytia hemisphaerica|type=transcript|length=1068bp|location=Sequence derived from alignment at sc0001487:48895..49962+ (Clytia hemisphaerica)
ctttttgacttaAACTTAATATAAATTTCAATATCTATCTTTTCAGGtcc
taataaaaaaataaaatcaattaagTAACTGAAATGTCACATGCTTTGGA
GATGTTCATGTATGATCAATTTCTTTTGGGAATTTTGGAATTTATGGATA
TCCTACACCAGTTTTGGTATCCTACACCATCTTTGTATTGAAAACGATTA
TGTGTGTCAAATGCACCTACCTTTTTCATGGCAgctatatttttcaactt
gGAGGCATATAATTATAGACTGAGTGAGATCAAtagaattattttcaatt
ttggtttaACTAATTTAACTGATATTATGGTGTTTGTCATGACCACAGCT
TTTGTTTTAAACAATGGTCAACAATTTGGGATTGAAAGTATGTTTATCCA
GCCATATAGATCGAATCAACTTGAGTGGCAGTGGATTATGGTAGATCATA
ATGATTGTGTAATGGAGTAATTTTCCTCCGTTTAATGTGTGTAATCTAGA
AGTCCAAGTGCAGGCCTGGTAAGTAGCAACCTTTTAAAGATTCCGATAAA
AAGCTATTATCATTATATCAGCACTGTCTTTTTTTCACGGACAAGAATTT
TGTGGTGTCATTTTGTTTGTGCAAGAGGTTTTAACCTGCTAGATGTTTTT
AAAACAGCAACAGCCCTCGTGCCGTACCTCCTTTTCATATTATAATATgc
ttattttgattttactagTACTGTTATTGTGTTAACCATGAAACATAGCT
GGTCTCCTCTTTGAGCAAGTACTGTCTCTTTTCTCATTTTAGGTAATAGT
GCGAAATATGATGTTTTACGCACGTCTAAGAAAATGGAACGTGTCGGTTT
CGTAGCGAGCACAGTTGACATTGGATCGGTATGTTTTTGCACAGCTTAAG
TATTATTATTAACTGATAATGATAAAGTTTTTGTCATAAAGTGCAGTTTG
TAGTTTGAACTAACCAAATCTTTTTAAATCGAATGAATAGTACTACTATT
ATTTTCATAATAAATGTTTCATTGATTAGAACTAAAAATGTCTCAAAAAA
GAGCTAAAGGTTAATATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036637-exon-sc0001487-1491911889:48895..49412 | TCONS_00036637-exon-sc0001487-1491911889:48895..49412 | Clytia hemisphaerica | exon |
| TCONS_00036637-exon-sc0001487-1510915933:48895..49412 | TCONS_00036637-exon-sc0001487-1510915933:48895..49412 | Clytia hemisphaerica | exon |
| TCONS_00036637-exon-sc0001487-1575043694:48895..49412 | TCONS_00036637-exon-sc0001487-1575043694:48895..49412 | Clytia hemisphaerica | exon |
| TCONS_00036637-exon-sc0001487-1491911889:49687..49962 | TCONS_00036637-exon-sc0001487-1491911889:49687..49962 | Clytia hemisphaerica | exon |
| TCONS_00036637-exon-sc0001487-1510915933:49687..49962 | TCONS_00036637-exon-sc0001487-1510915933:49687..49962 | Clytia hemisphaerica | exon |
| TCONS_00036637-exon-sc0001487-1575043694:49687..49962 | TCONS_00036637-exon-sc0001487-1575043694:49687..49962 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001487 | supercontig | sc0001487:48895..49962 + |
Blast
The following BLAST results are available for this feature:
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