TCONS_00036609 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036609
Unique NameTCONS_00036609
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2725

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036609 ID=TCONS_00036609|Name=TCONS_00036609|organism=Clytia hemisphaerica|type=transcript|length=2725bp
GTTAATTCTAATATCTACTGTTTTGTCTATTTGcaagtttctttaaaaaa
aataaaatggcaTCACAATTGAATTTACAACAGAAAATCAAAGCATTGAA
ATCGAAGAATATCGATCCATCAAAATGCACCCAACGAACATCATTGTATG
AGCAAATATTGAAAACTCCAAAATCCACCATCGACAACCAGAACCAAAAG
TTCAACCTCGGGAATGGCCAGTTATTTACCGACCCTATTCTTGCCGCTGA
TCAGCTTCTCCAAAGAGAatatgctgattcagcattatTCGACACCAACC
GCCACGATCCAATTTTCATTCCCCCAGTGTTCCAATCTCACCAATACGCG
AAGAAGGATTCAACCGTGCATCTCCTTGATTTCAATGTTGACATAAACAC
TCTTAAGAAATGTTTGGATAATTTGAAGAAGGCCTTTTGGTTTACACGAG
AACTTCAAGCTTTCTATGATCTCCAATTAAACAACTCTAGCGGTAATGAA
ATCAACGCAAAAGAATTCTATGATTGGATCTTGAATGTCGAAATCATGTA
TCTTTTGATGGAAGAGATTGGCAATCAACCGATCCAAAGTTCTTCCTCTC
GTCAACCAATTACAACCGATCTGACTTTACCATCAACAACTGAGGATAAC
AATACATTCATCCAAGCATGTATTCAGGAATTGGCTTCAAAATCACCAGG
ATCAAAATTGGACCAAACTCTTAAAAAGACGTTAAAAGATGTTAAAAAAG
AAGTCGAAAACTTGGTCAAACAAAACCCACCATCTCATCCAACGATAAAA
TGGCTTTTCGGATTAGTTTTATCGGAGCTCGGTGAAAAAGGCGAACGCTC
GTTTTTCGAAAAACTCTATTCGATCAAAGATGACCCTGTTCTTGAAGATG
CTGTGATTCTCAGTTCCATCAACTTTCTCACCAATGTCCAAAAGAAAATG
CATCAGGAGATTGACGTCCTTCTTTTCTCGTGGACCAAGAAATTAATCAT
AGGCGTTGAAATCAAACGGACACTGACTATAAAAGCTTTTGACCAGTTGG
ATAAATACCATAAATTGGTAGAGGAGAGATTGAGTGATCAGTTGGGACAT
GGCTGGACGTATCATCCAGTCATTTTTGTTGAGAAGGACAACTTTTTCTT
GaacaaacaacattacattgaTCAAGAAACAGATTTGAAATGTTGGTTAT
CCACCGTGTTGGCAAAATATCCGACCGTTCCCTCTGGAATACCTTTCATC
CCAGCAGTAAATCAAGTTAAAGACCTCCTAAGAATCGTTGTGTTTGCCAT
TCATGCTTCAAAAACAGCACCCATTACAACGTCAAACTGGGCAGAGTATA
TCTCGAAAGCCATCGATACCGTCTGCACCACTGACAACATACTCTTTTAC
AGTCAGCGTCAACTTCCCATCATGAAGACAGACACTTCTGAATTCAATAA
GATCCTCTTTTATGCGCCTTACGGATGCGGCAAGTCTTTCATCCTTCAGG
AGAAAGCAAAACAATTGAGTGAAATGACGGAATACAAAGGACGTGTTATG
TATGCCATTGAGAAGATTAAAGATTTAGAAACCCTTCTTGAGTGGAGATT
GAAAGACGAATTGGGAAAAGAACATGGAGTTGACGTCTATGGATACAGAA
GATACTATTTCGGTGATGGAGAGGAACATAAAGAGGAAACTGAAAAGCTG
gtgaaaaacattcgaatgaaAAACATCAACGCATTATTCATCGATGAGTG
TAATATTACCGATGATTTATTGAAAGAAATGATAACGAAAGTCAAACAAC
ACGTTGAGGTAATTTGGATTGCATCAAACGGGTACGGTCATCGGGAAATT
TTAAAAGGTGATAAAGATTTTTCGATGGGTAACGATTTCATGAAATATGA
ACTTGACGTAAATTTAAGAAACTGTGAAAGTATCGTTAGAGAGGCATTAA
ACTTTGAAGAAAGCAGCAGTTCGACATATAAAGAAGGGATAGTACTTCCA
CCACCGAATCACCCCAATGGAAAGCAACCCTACCATTCCGACTCATTTGA
AGATGCCATTACAGAAATGAGAAAGATCACGAACGATGGAGTGCTAGTGA
TATATGATACTGCATTCGAGAAGGATGATCTTCAAACATTGAACaagttg
aaattgaaatggAAAAGTTATGGAAAACGCAATAACGATTTCAATGAAGG
TGAAAGTCCATACCAATATCTCGTAGACAGAAACATTTTATTGATTGATG
ACTATAACTtagtttttggttttgaatgGAATAACATCATTATCATCGTG
AAAGAAAAAAGTGGATTTATTGATCGCCAATGTAATTTCATCATGAGATG
CACGACAAATCTCATGATTGTTGAGGTAGAAGAATTTTCTTCAGATGAAA
CCATTAGTGAAGATTCTTCAGTACAGATGATtaagttttaaagttttacc
aaaatcttaaatcatAAAATTCACAGTTTTGATATCTGATTTTTCATATC
TTGTTCACAATATTGAATTAATTGTCTTTTGTGTTTTATGTGAATTTCAT
GAAATatataaaatctttttctaCAGTCTTTCTTGCGATGTAGTCAAAAT
ATCCTCAACAAGCGAAAATTAGCGGTGAAACTTATGATGATActaaaaaa
tatgtttcaaaatatttacctaAATGTTTACAATATTTTTGAGGTTACTT
AAATAATAATCCATTTTAGATGGCC
Run BLAST on NCBI

protein sequence of TCONS_00036609-protein

>TCONS_00036609-protein ID=TCONS_00036609-protein|Name=TCONS_00036609-protein|organism=Clytia hemisphaerica|type=polypeptide|length=794bp
MASQLNLQQKIKALKSKNIDPSKCTQRTSLYEQILKTPKSTIDNQNQKFN
LGNGQLFTDPILAADQLLQREYADSALFDTNRHDPIFIPPVFQSHQYAKK
DSTVHLLDFNVDINTLKKCLDNLKKAFWFTRELQAFYDLQLNNSSGNEIN
AKEFYDWILNVEIMYLLMEEIGNQPIQSSSSRQPITTDLTLPSTTEDNNT
FIQACIQELASKSPGSKLDQTLKKTLKDVKKEVENLVKQNPPSHPTIKWL
FGLVLSELGEKGERSFFEKLYSIKDDPVLEDAVILSSINFLTNVQKKMHQ
EIDVLLFSWTKKLIIGVEIKRTLTIKAFDQLDKYHKLVEERLSDQLGHGW
TYHPVIFVEKDNFFLNKQHYIDQETDLKCWLSTVLAKYPTVPSGIPFIPA
VNQVKDLLRIVVFAIHASKTAPITTSNWAEYISKAIDTVCTTDNILFYSQ
RQLPIMKTDTSEFNKILFYAPYGCGKSFILQEKAKQLSEMTEYKGRVMYA
IEKIKDLETLLEWRLKDELGKEHGVDVYGYRRYYFGDGEEHKEETEKLVK
NIRMKNINALFIDECNITDDLLKEMITKVKQHVEVIWIASNGYGHREILK
GDKDFSMGNDFMKYELDVNLRNCESIVREALNFEESSSSTYKEGIVLPPP
NHPNGKQPYHSDSFEDAITEMRKITNDGVLVIYDTAFEKDDLQTLNKLKL
KWKSYGKRNNDFNEGESPYQYLVDRNILLIDDYNLVFGFEWNNIIIIVKE
KSGFIDRQCNFIMRCTTNLMIVEVEEFSSDETISEDSSVQMIKF
Run BLAST on NCBI

transcript from alignment at sc0001484:41725..45167+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036609 ID=TCONS_00036609|Name=TCONS_00036609|organism=Clytia hemisphaerica|type=transcript|length=3443bp|location=Sequence derived from alignment at sc0001484:41725..45167+ (Clytia hemisphaerica)
GTTAATTCTAATATCTACTGTTTTGTCTATTTGcaagtttctttaaaaaa aataaaatggcaTCACAATTGAATTTACAACAGAAAATCAAAGCATTGAA ATCGAAGAATATCGATCCATCAAAATGCACCCAACGAACATCATTGTATG AGCAAATATTGAAAACTCCAAAATCCACCATCGACAACCAGAACCAAAAG TTCAACCTCGGGAATGGCCAGTTATTTACCGACCCTATTCTTGCCGCTGA TCAGCTTCTCCAAAGAGAatatgctgattcagcattatTCGACACCAACC GCCACGATCCAATTTTCATTCCCCCAGTGTTCCAATCTCACCAATACGCG AAGAAGGATTCAACCGTGCATCTCCTTGATTTCAATGTTGACATAAACAC TCTTAAGAAATGTTTGGATAATTTGAAGAAGGCCTTTTGGTTTACACGAG AACTTCAAGCTTTCTATGATCTCCAATTAAACAACTCTAGCGGTAATGAA ATCAACGCAAAAGAATTCTATGATTGGATCTTGAATGTCGAAATCATGTA TCTTTTGATGGAAGAGATTGGCAATCAACCGATCCAAAGTTCTTCCTCTC GTCAACCAATTACAACCGATCTGACTTTACCATCAACAACTGAGGATAAC AATACATTCATCCAAGCATGTATTCAGGAATTGGCTTCAAAATCACCAGG ATCAAAATTGGACCAAACTCTTAAAAAGGTAACAATTTGTTTCTCGAAAT TTATAAAAACCCTTCATTATTAAGGTAAATAAAGTTCTGTGAACGAGGGC CTCTAAAGCTGATCGTGATTATTATTGTCAATTGTCTTGTGTCGAATCTT TTCGGATGTTTGAATACTTTGACTGTTTTGCCTCAGCGACAATTTTTGAC AGTTTATTTCAGGTTGATATAGTTCAGTAAAAGAAGGAATTCTTTTGTAC ACCTCGACGGAATCCATcgctttcaaagagaaaatttttttttaatccct AATTTCATTTCCAGACGTTAAAAGATGTTAAAAAAGAAGTCGAAAACTTG GTCAAACAAAACCCACCATCTCATCCAACGATAAAATGGCTTTTCGGATT AGTTTTATCGGAGCTCGGTGAAAAAGGCGAACGCTCGTTTTTCGAAAAAC TCTATTCGATCAAAGATGACCCTGTTCTTGAAGATGCTGTGATTCTCAGT TCCATCAACTTTCTCACCAATGTCCAAAAGAAAATGCATCAGGAGATTGA CGTCCTTCTTTTCTCGTGGACCAAGAAATTAATCATAGGCGTTGAAATCA AACGGACACTGACTATAAAAGCTTTTGACCAGTTGGATAAATACCATAAA TTGGTAGAGGAGAGATTGAGTGATCAGTTGGGACATGGCTGGACGTATCA TCCAGTCATTTTTGTTGAGAAGGACAACTTTTTCTTGaacaaacaacatt acattgaTCAAGAAACAGATTTGAAATGTTGGTTATCCACCGTGTTGGCA AAATATCCGACCGTTCCCTCTGGAATACCTTTCATCCCAGCAGTAAATCA AGTTAAAGACCTCCTAAGAATCGTTGTGTTTGCCATTCATGCTTCAAAAA CAGCACCCATTACAACGTCAAACTGGGCAGAGTATATCTCGAAAGCCATC GATACCGTCTGCACCACTGACAACATACTCTTTTACAGTCAGCGTCAACT TCCCATCATGAAGACAGACACTTCTGAATTCAATAAGATCCTCTTTTATG CGCCTTACGGATGCGGCAAGTCTTTCATCCTTCAGGAGAAAGCAAAACAA TTGAGTGAAATGACGGAATACAAAGGACGTGTTATGTATGCCATTGAGAA GATTAAAGATTTAGAAACCCTTCTTGAGTGGAGATTGAAAGACGAATTGG GAAAAGAACATGGAGTTGACGTCTATGGATACAGAAGATACTATGTGAGT TACATTTTGAATCTAATTTTGAATCTTTTCGAAATCTAACCAAATAAAAA GGATATAGAAAAATTCTAGTCTTTAACGTAGGTTTTCAATGATTCATAAT TTGCTTTTTCCATcttaattttacaaaaaaaataccgTTCAAATTTGCAT GCTGCAAGAGTGAGAAAAGTTAAATGTTTCTGTATGAACATACGTGTaca ttttaatcaaaaaatgaaaaaaaaacttataaacTAATAGTGCACCGTTG TGATCTTCTTCTCCTAATCTTACTGATATTGTTAAAAAAGTCAGAAACGc ttgaaatttcgattttgtcGTTCACTTTTCCGTGGCAGATTTTCCGTAGA TTTTTTGCAACCTCGCAtaattccatttttttgaagggatttacttgaaa caaaatttttcttttctttcaaacaGTTCGGTGATGGAGAGGAACATAAA GAGGAAACTGAAAAGCTGgtgaaaaacattcgaatgaaAAACATCAACGC ATTATTCATCGATGAGTGTAATATTACCGATGATTTATTGAAAGAAATGA TAACGAAAGTCAAACAACACGTTGAGGTAATTTGGATTGCATCAAACGGG TACGGTCATCGGGAAATTTTAAAAGGTGATAAAGATTTTTCGATGGGTAA CGATTTCATGAAATATGAACTTGACGTAAATTTAAGAAACTGTGAAAGTA TCGTTAGAGAGGCATTAAACTTTGAAGAAAGCAGCAGTTCGACATATAAA GAAGGGATAGTACTTCCACCACCGAATCACCCCAATGGAAAGCAACCCTA CCATTCCGACTCATTTGAAGATGCCATTACAGAAATGAGAAAGATCACGA ACGATGGAGTGCTAGTGATATATGATACTGCATTCGAGAAGGATGATCTT CAAACATTGAACaagttgaaattgaaatggAAAAGTTATGGAAAACGCAA TAACGATTTCAATGAAGGTGAAAGTCCATACCAATATCTCGTAGACAGAA ACATTTTATTGATTGATGACTATAACTtagtttttggttttgaatgGAAT AACATCATTATCATCGTGAAAGAAAAAAGTGGATTTATTGATCGCCAATG TAATTTCATCATGAGATGCACGACAAATCTCATGATTGTTGAGGTAGAAG AATTTTCTTCAGATGAAACCATTAGTGAAGATTCTTCAGTACAGATGATt aagttttaaagttttaccaaaatcttaaatcatAAAATTCACAGTTTTGA TATCTGATTTTTCATATCTTGTTCACAATATTGAATTAATTGTCTTTTGT GTTTTATGTGAATTTCATGAAATatataaaatctttttctaCAGTCTTTC TTGCGATGTAGTCAAAATATCCTCAACAAGCGAAAATTAGCGGTGAAACT TATGATGATActaaaaaatatgtttcaaaatatttacctaAATGTTTACA ATATTTTTGAGGTTACTTAAATAATAATCCATTTTAGATGGCC

Coding sequence (CDS) from alignment at sc0001484:41725..45167+

>TCONS_00036609 ID=TCONS_00036609|Name=TCONS_00036609|organism=Clytia hemisphaerica|type=CDS|length=7155bp|location=Sequence derived from alignment at sc0001484:41725..45167+ (Clytia hemisphaerica)
atggcaTCACAATTGAATTTACAACAGAAAATCAAAGCATTGAAATCGAA
GAATATCGATCCATCAAAATGCACCCAACGAACATCATTGTATGAGCAAA
TATTGAAAACTCCAAAATCCACCATCGACAACCAGAACCAAAAGTTCAAC
CTCGGGAATGGCCAGTTATTTACCGACCCTATTCTTGCCGCTGATCAGCT
TCTCCAAAGAGAatatgctgattcagcattatTCGACACCAACCGCCACG
ATCCAATTTTCATTCCCCCAGTGTTCCAATCTCACCAATACGCGAAGAAG
GATTCAACCGTGCATCTCCTTGATTTCAATGTTGACATAAACACTCTTAA
GAAATGTTTGGATAATTTGAAGAAGGCCTTTTGGTTTACACGAGAACTTC
AAGCTTTCTATGATCTCCAATTAAACAACTCTAGCGGTAATGAAATCAAC
GCAAAAGAATTCTATGATTGGATCTTGAATGTCGAAATCATGTATCTTTT
GATGGAAGAGATTGGCAATCAACCGATCCAAAGTTCTTCCTCTCGTCAAC
CAATTACAACCGATCTGACTTTACCATCAACAACTGAGGATAACAATACA
TTCATCCAAGCATGTATTCAGGAATTGGCTTCAAAATCACCAGGATCAAA
ATTGGACCAAACTCTTAAAAAGACGTTAAAAGATGTTAAAAAAGAAGTCG
AAAACTTGGTCAAACAAAACCCACCATCTCATCCAACGATAAAATGGCTT
TTCGGATTAGTTTTATCGGAGCTCGGTGAAAAAGGCGAACGCTCGTTTTT
CGAAAAACTCTATTCGATCAAAGATGACCCTGTTCTTGAAGATGCTGTGA
TTCTCAGTTCCATCAACTTTCTCACCAATGTCCAAAAGAAAATGCATCAG
GAGATTGACGTCCTTCTTTTCTCGTGGACCAAGAAATTAATCATAGGCGT
TGAAATCAAACGGACACTGACTATAAAAGCTTTTGACCAGTTGGATAAAT
ACCATAAATTGGTAGAGGAGAGATTGAGTGATCAGTTGGGACATGGCTGG
ACGTATCATCCAGTCATTTTTGTTGAGAAGGACAACTTTTTCTTGaacaa
acaacattacattgaTCAAGAAACAGATTTGAAATGTTGGTTATCCACCG
TGTTGGCAAAATATCCGACCGTTCCCTCTGGAATACCTTTCATCCCAGCA
GTAAATCAAGTTAAAGACCTCCTAAGAATCGTTGTGTTTGCCATTCATGC
TTCAAAAACAGCACCCATTACAACGTCAAACTGGGCAGAGTATATCTCGA
AAGCCATCGATACCGTCTGCACCACTGACAACATACTCTTTTACAGTCAG
CGTCAACTTCCCATCATGAAGACAGACACTTCTGAATTCAATAAGATCCT
CTTTTATGCGCCTTACGGATGCGGCAAGTCTTTCATCCTTCAGGAGAAAG
CAAAACAATTGAGTGAAATGACGGAATACAAAGGACGTGTTATGTATGCC
ATTGAGAAGATTAAAGATTTAGAAACCCTTCTTGAGTGGAGATTGAAAGA
CGAATTGGGAAAAGAACATGGAGTTGACGTCTATGGATACAGAAGATACT
ATTTCGGTGATGGAGAGGAACATAAAGAGGAAACTGAAAAGCTGgtgaaa
aacattcgaatgaaAAACATCAACGCATTATTCATCGATGAGTGTAATAT
TACCGATGATTTATTGAAAGAAATGATAACGAAAGTCAAACAACACGTTG
AGGTAATTTGGATTGCATCAAACGGGTACGGTCATCGGGAAATTTTAAAA
GGTGATAAAGATTTTTCGATGGGTAACGATTTCATGAAATATGAACTTGA
CGTAAATTTAAGAAACTGTGAAAGTATCGTTAGAGAGGCATTAAACTTTG
AAGAAAGCAGCAGTTCGACATATAAAGAAGGGATAGTACTTCCACCACCG
AATCACCCCAATGGAAAGCAACCCTACCATTCCGACTCATTTGAAGATGC
CATTACAGAAATGAGAAAGATCACGAACGATGGAGTGCTAGTGATATATG
ATACTGCATTCGAGAAGGATGATCTTCAAACATTGAACaagttgaaattg
aaatggAAAAGTTATGGAAAACGCAATAACGATTTCAATGAAGGTGAAAG
TCCATACCAATATCTCGTAGACAGAAACATTTTATTGATTGATGACTATA
ACTtagtttttggttttgaatgGAATAACATCATTATCATCGTGAAAGAA
AAAAGTGGATTTATTGATCGCCAATGTAATTTCATCATGAGATGCACGAC
AAATCTCATGATTGTTGAGGTAGAAGAATTTTCTTCAGATGAAACCATTA
GTGAAGATTCTTCAGTACAGATGATtaagttttaaatggcaTCACAATTG
AATTTACAACAGAAAATCAAAGCATTGAAATCGAAGAATATCGATCCATC
AAAATGCACCCAACGAACATCATTGTATGAGCAAATATTGAAAACTCCAA
AATCCACCATCGACAACCAGAACCAAAAGTTCAACCTCGGGAATGGCCAG
TTATTTACCGACCCTATTCTTGCCGCTGATCAGCTTCTCCAAAGAGAata
tgctgattcagcattatTCGACACCAACCGCCACGATCCAATTTTCATTC
CCCCAGTGTTCCAATCTCACCAATACGCGAAGAAGGATTCAACCGTGCAT
CTCCTTGATTTCAATGTTGACATAAACACTCTTAAGAAATGTTTGGATAA
TTTGAAGAAGGCCTTTTGGTTTACACGAGAACTTCAAGCTTTCTATGATC
TCCAATTAAACAACTCTAGCGGTAATGAAATCAACGCAAAAGAATTCTAT
GATTGGATCTTGAATGTCGAAATCATGTATCTTTTGATGGAAGAGATTGG
CAATCAACCGATCCAAAGTTCTTCCTCTCGTCAACCAATTACAACCGATC
TGACTTTACCATCAACAACTGAGGATAACAATACATTCATCCAAGCATGT
ATTCAGGAATTGGCTTCAAAATCACCAGGATCAAAATTGGACCAAACTCT
TAAAAAGACGTTAAAAGATGTTAAAAAAGAAGTCGAAAACTTGGTCAAAC
AAAACCCACCATCTCATCCAACGATAAAATGGCTTTTCGGATTAGTTTTA
TCGGAGCTCGGTGAAAAAGGCGAACGCTCGTTTTTCGAAAAACTCTATTC
GATCAAAGATGACCCTGTTCTTGAAGATGCTGTGATTCTCAGTTCCATCA
ACTTTCTCACCAATGTCCAAAAGAAAATGCATCAGGAGATTGACGTCCTT
CTTTTCTCGTGGACCAAGAAATTAATCATAGGCGTTGAAATCAAACGGAC
ACTGACTATAAAAGCTTTTGACCAGTTGGATAAATACCATAAATTGGTAG
AGGAGAGATTGAGTGATCAGTTGGGACATGGCTGGACGTATCATCCAGTC
ATTTTTGTTGAGAAGGACAACTTTTTCTTGaacaaacaacattacattga
TCAAGAAACAGATTTGAAATGTTGGTTATCCACCGTGTTGGCAAAATATC
CGACCGTTCCCTCTGGAATACCTTTCATCCCAGCAGTAAATCAAGTTAAA
GACCTCCTAAGAATCGTTGTGTTTGCCATTCATGCTTCAAAAACAGCACC
CATTACAACGTCAAACTGGGCAGAGTATATCTCGAAAGCCATCGATACCG
TCTGCACCACTGACAACATACTCTTTTACAGTCAGCGTCAACTTCCCATC
ATGAAGACAGACACTTCTGAATTCAATAAGATCCTCTTTTATGCGCCTTA
CGGATGCGGCAAGTCTTTCATCCTTCAGGAGAAAGCAAAACAATTGAGTG
AAATGACGGAATACAAAGGACGTGTTATGTATGCCATTGAGAAGATTAAA
GATTTAGAAACCCTTCTTGAGTGGAGATTGAAAGACGAATTGGGAAAAGA
ACATGGAGTTGACGTCTATGGATACAGAAGATACTATTTCGGTGATGGAG
AGGAACATAAAGAGGAAACTGAAAAGCTGgtgaaaaacattcgaatgaaA
AACATCAACGCATTATTCATCGATGAGTGTAATATTACCGATGATTTATT
GAAAGAAATGATAACGAAAGTCAAACAACACGTTGAGGTAATTTGGATTG
CATCAAACGGGTACGGTCATCGGGAAATTTTAAAAGGTGATAAAGATTTT
TCGATGGGTAACGATTTCATGAAATATGAACTTGACGTAAATTTAAGAAA
CTGTGAAAGTATCGTTAGAGAGGCATTAAACTTTGAAGAAAGCAGCAGTT
CGACATATAAAGAAGGGATAGTACTTCCACCACCGAATCACCCCAATGGA
AAGCAACCCTACCATTCCGACTCATTTGAAGATGCCATTACAGAAATGAG
AAAGATCACGAACGATGGAGTGCTAGTGATATATGATACTGCATTCGAGA
AGGATGATCTTCAAACATTGAACaagttgaaattgaaatggAAAAGTTAT
GGAAAACGCAATAACGATTTCAATGAAGGTGAAAGTCCATACCAATATCT
CGTAGACAGAAACATTTTATTGATTGATGACTATAACTtagtttttggtt
ttgaatgGAATAACATCATTATCATCGTGAAAGAAAAAAGTGGATTTATT
GATCGCCAATGTAATTTCATCATGAGATGCACGACAAATCTCATGATTGT
TGAGGTAGAAGAATTTTCTTCAGATGAAACCATTAGTGAAGATTCTTCAG
TACAGATGATtaagttttaaatggcaTCACAATTGAATTTACAACAGAAA
ATCAAAGCATTGAAATCGAAGAATATCGATCCATCAAAATGCACCCAACG
AACATCATTGTATGAGCAAATATTGAAAACTCCAAAATCCACCATCGACA
ACCAGAACCAAAAGTTCAACCTCGGGAATGGCCAGTTATTTACCGACCCT
ATTCTTGCCGCTGATCAGCTTCTCCAAAGAGAatatgctgattcagcatt
atTCGACACCAACCGCCACGATCCAATTTTCATTCCCCCAGTGTTCCAAT
CTCACCAATACGCGAAGAAGGATTCAACCGTGCATCTCCTTGATTTCAAT
GTTGACATAAACACTCTTAAGAAATGTTTGGATAATTTGAAGAAGGCCTT
TTGGTTTACACGAGAACTTCAAGCTTTCTATGATCTCCAATTAAACAACT
CTAGCGGTAATGAAATCAACGCAAAAGAATTCTATGATTGGATCTTGAAT
GTCGAAATCATGTATCTTTTGATGGAAGAGATTGGCAATCAACCGATCCA
AAGTTCTTCCTCTCGTCAACCAATTACAACCGATCTGACTTTACCATCAA
CAACTGAGGATAACAATACATTCATCCAAGCATGTATTCAGGAATTGGCT
TCAAAATCACCAGGATCAAAATTGGACCAAACTCTTAAAAAGACGTTAAA
AGATGTTAAAAAAGAAGTCGAAAACTTGGTCAAACAAAACCCACCATCTC
ATCCAACGATAAAATGGCTTTTCGGATTAGTTTTATCGGAGCTCGGTGAA
AAAGGCGAACGCTCGTTTTTCGAAAAACTCTATTCGATCAAAGATGACCC
TGTTCTTGAAGATGCTGTGATTCTCAGTTCCATCAACTTTCTCACCAATG
TCCAAAAGAAAATGCATCAGGAGATTGACGTCCTTCTTTTCTCGTGGACC
AAGAAATTAATCATAGGCGTTGAAATCAAACGGACACTGACTATAAAAGC
TTTTGACCAGTTGGATAAATACCATAAATTGGTAGAGGAGAGATTGAGTG
ATCAGTTGGGACATGGCTGGACGTATCATCCAGTCATTTTTGTTGAGAAG
GACAACTTTTTCTTGaacaaacaacattacattgaTCAAGAAACAGATTT
GAAATGTTGGTTATCCACCGTGTTGGCAAAATATCCGACCGTTCCCTCTG
GAATACCTTTCATCCCAGCAGTAAATCAAGTTAAAGACCTCCTAAGAATC
GTTGTGTTTGCCATTCATGCTTCAAAAACAGCACCCATTACAACGTCAAA
CTGGGCAGAGTATATCTCGAAAGCCATCGATACCGTCTGCACCACTGACA
ACATACTCTTTTACAGTCAGCGTCAACTTCCCATCATGAAGACAGACACT
TCTGAATTCAATAAGATCCTCTTTTATGCGCCTTACGGATGCGGCAAGTC
TTTCATCCTTCAGGAGAAAGCAAAACAATTGAGTGAAATGACGGAATACA
AAGGACGTGTTATGTATGCCATTGAGAAGATTAAAGATTTAGAAACCCTT
CTTGAGTGGAGATTGAAAGACGAATTGGGAAAAGAACATGGAGTTGACGT
CTATGGATACAGAAGATACTATTTCGGTGATGGAGAGGAACATAAAGAGG
AAACTGAAAAGCTGgtgaaaaacattcgaatgaaAAACATCAACGCATTA
TTCATCGATGAGTGTAATATTACCGATGATTTATTGAAAGAAATGATAAC
GAAAGTCAAACAACACGTTGAGGTAATTTGGATTGCATCAAACGGGTACG
GTCATCGGGAAATTTTAAAAGGTGATAAAGATTTTTCGATGGGTAACGAT
TTCATGAAATATGAACTTGACGTAAATTTAAGAAACTGTGAAAGTATCGT
TAGAGAGGCATTAAACTTTGAAGAAAGCAGCAGTTCGACATATAAAGAAG
GGATAGTACTTCCACCACCGAATCACCCCAATGGAAAGCAACCCTACCAT
TCCGACTCATTTGAAGATGCCATTACAGAAATGAGAAAGATCACGAACGA
TGGAGTGCTAGTGATATATGATACTGCATTCGAGAAGGATGATCTTCAAA
CATTGAACaagttgaaattgaaatggAAAAGTTATGGAAAACGCAATAAC
GATTTCAATGAAGGTGAAAGTCCATACCAATATCTCGTAGACAGAAACAT
TTTATTGATTGATGACTATAACTtagtttttggttttgaatgGAATAACA
TCATTATCATCGTGAAAGAAAAAAGTGGATTTATTGATCGCCAATGTAAT
TTCATCATGAGATGCACGACAAATCTCATGATTGTTGAGGTAGAAGAATT
TTCTTCAGATGAAACCATTAGTGAAGATTCTTCAGTACAGATGATtaagt
tttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021611XLOC_021611Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036609-proteinTCONS_00036609-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036609-exon-sc0001484-1491911889:41725..42452TCONS_00036609-exon-sc0001484-1491911889:41725..42452Clytia hemisphaericaexon
TCONS_00036609-exon-sc0001484-1510915933:41725..42452TCONS_00036609-exon-sc0001484-1510915933:41725..42452Clytia hemisphaericaexon
TCONS_00036609-exon-sc0001484-1575043694:41725..42452TCONS_00036609-exon-sc0001484-1575043694:41725..42452Clytia hemisphaericaexon
TCONS_00036609-exon-sc0001484-1491911889:42739..43668TCONS_00036609-exon-sc0001484-1491911889:42739..43668Clytia hemisphaericaexon
TCONS_00036609-exon-sc0001484-1510915933:42739..43668TCONS_00036609-exon-sc0001484-1510915933:42739..43668Clytia hemisphaericaexon
TCONS_00036609-exon-sc0001484-1575043694:42739..43668TCONS_00036609-exon-sc0001484-1575043694:42739..43668Clytia hemisphaericaexon
TCONS_00036609-exon-sc0001484-1491911889:44101..45167TCONS_00036609-exon-sc0001484-1491911889:44101..45167Clytia hemisphaericaexon
TCONS_00036609-exon-sc0001484-1510915933:44101..45167TCONS_00036609-exon-sc0001484-1510915933:44101..45167Clytia hemisphaericaexon
TCONS_00036609-exon-sc0001484-1575043694:44101..45167TCONS_00036609-exon-sc0001484-1575043694:44101..45167Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001484supercontigsc0001484:41725..45167 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0845229 0.157911 0.0476149 0 10.6248 7.78371 7.80594 7.53557 3.49904 3.79989 3.5837 2.78259 3.35593 2.33325 0.835266 1.05288 0.682007 0.728128 2.82112 2.82067 1.1763 1.19687 0.455554 0.778452 4.83934 6.08641 2.28267 1.92049 2.17296 1.36944
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036609 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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