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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036588 ID=TCONS_00036588|Name=TCONS_00036588|organism=Clytia hemisphaerica|type=transcript|length=1756bp
CCCACTGTGTCTTATTCGTCTGTTAGGCCAGCACCcgaataaggctccag
tacaccTATGTCACCAATATATACACACTCCAAATTAAACAGCTTAAAAT
ACAGTCATCAATCCAAAGATAAAAGTGATTTGGTCGAAATGCTAAAAGTA
GTATTTTGCCAACTTATGAATTCAAACTACGGAGAAGAATTTGCAGAAAC
ATTCTTCAACATCCTGATTATAGATGAGACATCCCCAAAACAACCTTACT
ACATTGATAGCCTTGAGCTACTAATTAATATTGGCCTGAAAATGGCTGAT
ATCTTGAAATACTTATTCTATCTATTTAACTGAGGAttggaaataatttt
aaaaGGAAGTAAAACTTCTTTTCGAATTAAACTTGAAATAGGATGGAAAG
TGGTTAGTTAATTTTTGTGAATaatattaaaaaacaaagtCGATGATAAC
ACAATGATGCACATGGCGTCGCGGTAATAATAATAGAGACAATCCCTATC
CTTCAGGCAACAAAGATAAGACAAAAATGcaagtttcaaaattgattaga
tttacattattttttattgcCCTGAGCTGGCTACACTGCCGAAAAACGCG
ACCCCATTCAGCCATTTAAGGTCAGAGGAATTCATTATATTTCCTTCGTT
CTTAGCTTTATAGCGACCACTTAGTGCTCTCCTTACGCGCAATGGCGTCT
TCCACCCTACACTAAACAGCAACTAAACAAATGCTTTTCACCCCTTCTGA
ACTTTAGTGTTATTTCGGCAGTGATTGGCGGCCGACCAGCTAAGTTGTAA
GTATCCTTATATTTATAGTTAGTATTGAACAGCATTGTTATTGCTAAATA
TTTCGAATGTATTGTAACTGCATAGTCATACATCACTGTCTGTAGATAAA
ATTAGGTCCCCCACCTAGGTTCTAAAGCCGTCCTTTTCATAGTCTGGTCT
CACTCACCTACTAGGTCTCATTTGTTTGGTAGGCCGTCACTCGAATTAGG
CAGCACAATTATCAAGAATACGAAATGATGTTCGTATACCAGACATTCAT
TTTAATGTGTATTGACGAGAAACTGGTAAGGCGGCATCTACTAGTGACTT
TTACATACATCTGGCAACAGATGTTGCTAAATTGCACATGgtatgagaat
tttttttttacttgaaataaaTACTTTAGTGACTCTTATCATCATATGGA
GTTGTGACTGTAGAAATACATTGGGAAGACAttattctcattctaaaaca
aacaatctgCATTATCCACTCAAGTCAAATGTGCTGACGCAGGAAAAGAC
CATGAAAAAGCTTTCTCTAGCTACCACCATTCAGCCAATAGAAAATCACC
ATATACGATTCACATTGAATAGATTTAGCATGAAGATCATCGAAGAAAAT
GGACTGTAACCCCGTTAGCCCAAGCGTGACTAATATGTTTACAAACTTTA
GAACTGAGAATTGAGTTGAACAACAAGACATCCTTGTCCTTTGTACTTTT
GTAGAAAGTACTATTAGATTCATTGCTGCTtcattaaaatcataaaaatg
aaacCATAACCTTTACATGGTATACATATTTGGAAAACCCTACTAACAGC
TTCAAAACTTCGACTTTAAAGCCTTTTTTGTTCTActtcttctcaagtct
tttattcATATGATAACGAAGATAACAGGGGCAAAATCATGGTCAGCTTT
CCTAGACTACGactaatattttaaaattttgacttaaaatttccGAATAA
TTTCAG Run BLAST on NCBI transcript from alignment at sc0001482:3995..5750 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036588 ID=TCONS_00036588|Name=TCONS_00036588|organism=Clytia hemisphaerica|type=transcript|length=1756bp|location=Sequence derived from alignment at sc0001482:3995..5750 (Clytia hemisphaerica)
CTGAAATTATTCggaaattttaagtcaaaattttaaaatattagtCGTAG
TCTAGGAAAGCTGACCATGATTTTGCCCCTGTTATCTTCGTTATCATATg
aataaaagacttgagaagaagTAGAACAAAAAAGGCTTTAAAGTCGAAGT
TTTGAAGCTGTTAGTAGGGTTTTCCAAATATGTATACCATGTAAAGGTTA
TGgtttcatttttatgattttaatgaAGCAGCAATGAATCTAATAGTACT
TTCTACAAAAGTACAAAGGACAAGGATGTCTTGTTGTTCAACTCAATTCT
CAGTTCTAAAGTTTGTAAACATATTAGTCACGCTTGGGCTAACGGGGTTA
CAGTCCATTTTCTTCGATGATCTTCATGCTAAATCTATTCAATGTGAATC
GTATATGGTGATTTTCTATTGGCTGAATGGTGGTAGCTAGAGAAAGCTTT
TTCATGGTCTTTTCCTGCGTCAGCACATTTGACTTGAGTGGATAATGcag
attgtttgttttagaatgagaataaTGTCTTCCCAATGTATTTCTACAGT
CACAACTCCATATGATGATAAGAGTCACTAAAGTAtttatttcaagtaaa
aaaaaaattctcatacCATGTGCAATTTAGCAACATCTGTTGCCAGATGT
ATGTAAAAGTCACTAGTAGATGCCGCCTTACCAGTTTCTCGTCAATACAC
ATTAAAATGAATGTCTGGTATACGAACATCATTTCGTATTCTTGATAATT
GTGCTGCCTAATTCGAGTGACGGCCTACCAAACAAATGAGACCTAGTAGG
TGAGTGAGACCAGACTATGAAAAGGACGGCTTTAGAACCTAGGTGGGGGA
CCTAATTTTATCTACAGACAGTGATGTATGACTATGCAGTTACAATACAT
TCGAAATATTTAGCAATAACAATGCTGTTCAATACTAACTATAAATATAA
GGATACTTACAACTTAGCTGGTCGGCCGCCAATCACTGCCGAAATAACAC
TAAAGTTCAGAAGGGGTGAAAAGCATTTGTTTAGTTGCTGTTTAGTGTAG
GGTGGAAGACGCCATTGCGCGTAAGGAGAGCACTAAGTGGTCGCTATAAA
GCTAAGAACGAAGGAAATATAATGAATTCCTCTGACCTTAAATGGCTGAA
TGGGGTCGCGTTTTTCGGCAGTGTAGCCAGCTCAGGgcaataaaaaataa
tgtaaatctaatcaattttgaaacttgCATTTTTGTCTTATCTTTGTTGC
CTGAAGGATAGGGATTGTCTCTATTATTATTACCGCGACGCCATGTGCAT
CATTGTGTTATCATCGactttgttttttaatattATTCACAAAAATTAAC
TAACCACTTTCCATCCTATTTCAAGTTTAATTCGAAAAGAAGTTTTACTT
CCttttaaaattatttccaaTCCTCAGTTAAATAGATAGAATAAGTATTT
CAAGATATCAGCCATTTTCAGGCCAATATTAATTAGTAGCTCAAGGCTAT
CAATGTAGTAAGGTTGTTTTGGGGATGTCTCATCTATAATCAGGATGTTG
AAGAATGTTTCTGCAAATTCTTCTCCGTAGTTTGAATTCATAAGTTGGCA
AAATACTACTTTTAGCATTTCGACCAAATCACTTTTATCTTTGGATTGAT
GACTGTATTTTAAGCTGTTTAATTTGGAGTGTGTATATATTGGTGACATA
ggtgtactggagccttattcgGGTGCTGGCCTAACAGACGAATAAGACAC
AGTGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036588-exon-sc0001482-1491911889:3995..5750 | TCONS_00036588-exon-sc0001482-1491911889:3995..5750 | Clytia hemisphaerica | exon |
| TCONS_00036588-exon-sc0001482-1510915933:3995..5750 | TCONS_00036588-exon-sc0001482-1510915933:3995..5750 | Clytia hemisphaerica | exon |
| TCONS_00036588-exon-sc0001482-1575043694:3995..5750 | TCONS_00036588-exon-sc0001482-1575043694:3995..5750 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001482 | supercontig | sc0001482:3995..5750 . |
Blast
The following BLAST results are available for this feature:
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