|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036491 ID=TCONS_00036491|Name=TCONS_00036491|organism=Clytia hemisphaerica|type=transcript|length=713bp
TATAAATAGCAGGCTGGGATTTAGCTGAAGATCAGAAACATAAAGATACT
CCATCAAGAAGCATCCAAATAGAAACCAAGCAGAAATTCACATAAATTAT
CAATCATAGCAATGGATTCCTTGAAATTATTGACTGttttatttgttgtt
gttgttttgcttTGTCAAATGAATTCGATTGAAGGCAAGCCATGCGGTGG
TGCAAGGTGGAACAAACCATGTCCTAAGAACAAACATAACCAAAAGAAAT
CAAACACTAAAAGACACACAAGACACCAACGAGCCATCCAGGAACAACAA
GACTTGGAAGTCATGAAGGAAATCGAACGAATTATGAACCGCCAAAACAA
TAACTTAAATTTATAATTGAGATGTTGTTGAAGTTGACAAAGAAGGAGCA
ATGTTCAATGAAGATGAACGACAATGGAACGAGAAGAAgttaatttgaaa
ttaaattaaattgagaCGTTTGATCCGCGCTCAAATCTTCAAGGaagaac
tttttaaatatttttacaatcgatattttttataaccNGTTGATCCGCGC
TCAAATCTTCAAGGaagaactttttaaatatttttacaatcgatattttt
tataaccgtacatcctgtgcccaagttcaggagttgccataaagccatta
tggtaataactgggagggcacattgctatacattgtataaTCGATATTTT
ATAAAACATCCCA Run BLAST on NCBI transcript from alignment at sc0001472:56260..57393+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036491 ID=TCONS_00036491|Name=TCONS_00036491|organism=Clytia hemisphaerica|type=transcript|length=1134bp|location=Sequence derived from alignment at sc0001472:56260..57393+ (Clytia hemisphaerica)
TATAAATAGCAGGCTGGGATTTAGCTGAAGATCAGAAACATAAAGATACT
CCATCAAGAAGCATCCAAATAGAAACCAAGCAGAAATTCACATAAATTAT
CAATCATAGCAATGGATTCCTTGAAATTATTGACTGttttatttgttgtt
gttgttttgcttTGTCAAATGAATTCGATTGAAGGCAAGCCATGCGGTGG
TGCAAGGTGGAACAAACCATGTCCTAAGAACAAACATAACCAAAAGGTAA
GGAGAATTTGTTTATAAACAATATGCTCAACTTGACATAAAGTGGAATGA
GGGTTAACGCTACACTTCAGGCCGGCGGAAGCGAGGAGACAGGGGAGACT
TTAGCCTctccacttttgagcaaatgagattttttttctcaaattcctag
ggaatttatctcattttgagccttcagccttcCCGCTTTTATGGTTGTTC
CGCCTCGGTTCCGCCGGACCAACACTTAGATCTGCAGTCATCTTTGAGAA
AGGGCTCAGGCTTCTGTTTATCATCCAACGAAAAAATTTCTTATATGAAG
CATCTAGAGAGgtttgcgattcagactagcaaGGTTTATCTCAACCATCA
taactgaaaagaaaaacttttccgTTGAATCAACACTCATTTGTAATCCT
ATTTCCCTTGTCTTCAGAAATCAAACACTAAAAGACACACAAGACACCAA
CGAGCCATCCAGGAACAACAAGACTTGGAAGTCATGAAGGAAATCGAACG
AATTATGAACCGCCAAAACAATAACTTAAATTTATAATTGAGATGTTGTT
GAAGTTGACAAAGAAGGAGCAATGTTCAATGAAGATGAACGACAATGGAA
CGAGAAGAAgttaatttgaaattaaattaaattgagaCGTTTGATCCGCG
CTCAAATCTTCAAGGaagaactttttaaatatttttacaatcgatatttt
ttataaccNGTTGATCCGCGCTCAAATCTTCAAGGaagaactttttaaat
atttttacaatcgatattttttataaccgtacatcctgtgcccaagttca
ggagttgccataaagccattatggtaataactgggagggcacattgctat
acattgtataaTCGATATTTTATAAAACATCCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036491-exon-sc0001472-1491911889:56260..56505 | TCONS_00036491-exon-sc0001472-1491911889:56260..56505 | Clytia hemisphaerica | exon |
| TCONS_00036491-exon-sc0001472-1510915933:56260..56505 | TCONS_00036491-exon-sc0001472-1510915933:56260..56505 | Clytia hemisphaerica | exon |
| TCONS_00036491-exon-sc0001472-1575043694:56260..56505 | TCONS_00036491-exon-sc0001472-1575043694:56260..56505 | Clytia hemisphaerica | exon |
| TCONS_00036491-exon-sc0001472-1491911889:56927..57393 | TCONS_00036491-exon-sc0001472-1491911889:56927..57393 | Clytia hemisphaerica | exon |
| TCONS_00036491-exon-sc0001472-1510915933:56927..57393 | TCONS_00036491-exon-sc0001472-1510915933:56927..57393 | Clytia hemisphaerica | exon |
| TCONS_00036491-exon-sc0001472-1575043694:56927..57393 | TCONS_00036491-exon-sc0001472-1575043694:56927..57393 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001472 | supercontig | sc0001472:56260..57393 + |
Blast
The following BLAST results are available for this feature:
|
