TCONS_00036478 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036478
Unique NameTCONS_00036478
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length184

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036478 ID=TCONS_00036478|Name=TCONS_00036478|organism=Clytia hemisphaerica|type=transcript|length=184bp
AGGACGCCGATGACAAATCAATAAGAAAATCAGTGGGTGATCATTTGAAG
AATGCACCTTTCAGAAAAGGTGGCACTGGAAAACTTAAAAagtagttttt
atttaatttttatgcCTACTTTGCACCAGGGTCGATTCATCCGTTTCCAT
TTAGTGAAACGAAAAGTAAAATAATTTAGAAAAC
Run BLAST on NCBI

transcript from alignment at sc0001466:55989..56172

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036478 ID=TCONS_00036478|Name=TCONS_00036478|organism=Clytia hemisphaerica|type=transcript|length=184bp|location=Sequence derived from alignment at sc0001466:55989..56172 (Clytia hemisphaerica)
GTTTTCTAAATTATTTTACTTTTCGTTTCACTAAATGGAAACGGATGAAT
CGACCCTGGTGCAAAGTAGgcataaaaattaaataaaaactactTTTTAA
GTTTTCCAGTGCCACCTTTTCTGAAAGGTGCATTCTTCAAATGATCACCC
ACTGATTTTCTTATTGATTTGTCATCGGCGTCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021502XLOC_021502Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036478-exon-sc0001466-1491911889:55989..56172TCONS_00036478-exon-sc0001466-1491911889:55989..56172Clytia hemisphaericaexon
TCONS_00036478-exon-sc0001466-1510915933:55989..56172TCONS_00036478-exon-sc0001466-1510915933:55989..56172Clytia hemisphaericaexon
TCONS_00036478-exon-sc0001466-1575043694:55989..56172TCONS_00036478-exon-sc0001466-1575043694:55989..56172Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001466supercontigsc0001466:55989..56172 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036478 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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