TCONS_00036459 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036459
Unique NameTCONS_00036459
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2882

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036459 ID=TCONS_00036459|Name=TCONS_00036459|organism=Clytia hemisphaerica|type=transcript|length=2882bp
TCAGGGTATAAGATATTAAAATGAATTTGCTAACGGCTGCAATTCTTTTG
GAGACTTTATTTACAATTATTTTCTTTGGGGCCATCTTTGTATTTGGAGT
TTGCTGCAACATTTTGTCGTGTTTCATCTCATGGTTGTACATTGTTGGAT
TTCTCTCCCTTCTTTATTGGTTTTTGGTCACCGAGAGAACTCCTTCACCA
CAAGAAACTCGAAAGCGTAAAGATACTTTTGTTGTCATCGTTGGTGCTGG
CTATTCCGGACTATGTGCGGCTATCCGGTTGAAAAAAGAACGTATCCGCT
TTGTTTTGATCGAGAAATCGGAAACGCTTGGCGGAACCTGGTGGGATAAC
AAATATCCAGGGTGTGCTTGTGACATTCCCTCACATTTTTATAGTTTATC
CTTTAAACTGAACGCGTTTTGGACAAAGATGTATTCTTCAGGAGATGAAA
TTCAGGACTATTTAGAAGATACAGCTGATTATTACGGCATCCGAGAGCAC
GTCAAATTCGGTTGCAAAGTTGAGACATGTGAATTCAACAGAGAGACACA
AAAATGGTCAGTCAAAACTTCGACCGGTCAGGAATTCGAATGTAATTATC
TCATCTCTGGAATGGGAGCTTTACATGCCCCTAAATTTCCCAGTTTGAAA
GGAATGGAAGAATTTCAAGGAGAGCATTTTCACACTGCTCAATGGAAAGA
CGATTTTGATTGGTCCGGAAAACGCGTAGGAATTATCGGTACTGGGAGCT
CTTCAATTCAAGCCGTACCGAAACTCGCCGAACGTTGTGAAGAGCTTTAC
GTCTTCCAAAGAACACCAGCTTGGATTTTCCCTCTCTTGAATTTGCGTTA
TCCAGCTatcattcaaaaactttttcaagcTTTCCCATTTGTTATGAAGC
TCCATCggttatattttttcttcagattCGAATTCGTATTTGCTGCTTTC
TTCGGGAAAGTATCGATAGCCCGAGAGATTATCTCTAATCTAACCAACCA
ACTCATGTCGAATGAAGTTGCCGATCCCAAATTGGCTGAGAAACTTATTC
CTAAGTACTCAATGTTTAGTAAAAGAATTACCATCTCGAACGattatttg
aaaacttttaatcgACCAAACGTTCATCTTATCACTGAACCGATTCAAGA
AATTACCCATGATTCTATTCTCCTTAAAAATAACCAAGATGCATCAGCGA
AAGAAGTGGAATTAGATGCGATCATTTATGCAACAGGATTCGACGTTTTG
CAAAGTTCGACAAATATGGATATCAAAAACCCAAATAACGGAAAGTCTTT
ATCAACAATTTGGGGAGAAACACCGAATGCTTACATGGGGATTATGCCAG
CCGGAATACCGAATTTTTTCATGCTCTTCGGACCCGGAACTGTGTTAGGG
CACAGCAGTGCGATCTTTATGACGGAATGTCAAATAGATTTTATGATGAA
GACGATTACTCGATCCATTGATAACAATTGTGCTTCTGTCGAAGTGACAC
AAGAAATGAATGAGGGTTATAAATCTTACGTCACCGAAGAATTAAAGAAA
GTTGTTTACGGAACATCTCCTGAATGTAAAGGCTGGTATTACAACGAGAG
TGGAACGAATTATACTTTATGGCCAGCTAGTTGTTTGCATTATTGGTGGA
AAACCTCGCAAGTGAATTTCGAAGATTTTAAGACCACCAAGACTTGTGAC
AAGGAGTGAAATCTAATCCTAAGAAAACCTTAATAACTTGTTACTTTATT
TGCCTTTTTAAGCAGGACCTTATAAGCATTGTTTTTTGCCTTGATGTGGA
TTATtaggggaaatttgttcgttttgcCGTTGAGGtaaggtacagaaatc
acctatactcgcaatatatctctaatcttaatttttgagagctttccaaa
aatatacaacaggtctccgttttctcacgctaaaattttcattatttttt
ggccctatgatttttgcctgagaccgtcatatttgtccgaaaacacacca
aagtgtccgaaagaaaaactggcacccaagttattttgattcccctaccc
cttagcttttcaaaaatgtataacaagtgctttgactaaaaaaatcgagc
gattttaaaaatttccctgTACTCATCGACCTCTAACGGACCGACCGTTA
GAGGTCGATGCTGTACTATAGAGCTCCGACGTTGAAATAGGCTATAATAT
GTATAAAtaagttttttatttctaaCTAAAAAGCAGGGGTTAGCTGTTGC
CTGACTGTTTTTTATTCCATTTCATTTGACACTATCTTGACGTAATCTCA
AAATTTGACAGAATCGGATTAAAGGAACTGACGTTTGCATAAAAACAATT
ATCAAGACCCGTGTCCTCAGTCCTTTAAATAGATTAGTCCgggaaaaatg
gcattttgcttaacccaagattctacaggataaactatacaatCTTGGAA
ACCTtaactatcctagtttaagaaatggtcggtccccaaagctaactcct
ggtcaatttttcatactgggcccaaatttagggggtactttttccccttt
gtaaggatttgttaaggaaaatatctttccatgtatgatataatttgcta
tatctcatgaataaattgaccaattgctttgaaactttgccaaaagtttc
aagataGATTGGTGATCGTCATTGGCAAAAAGGTTAtccgaaaaattatt
tttgggggtttacctggggaaaaaagggaaaatttgggtattttcactga
attttgacactttataagactgggacctaccaaaacaacttttaatgagg
cacaaactttgtgttatgataaaatttgatgcgatacaccagaaaaattt
cttggCAACTGTATTTAGTATCATTTTCGACG
Run BLAST on NCBI

protein sequence of TCONS_00036459-protein

>TCONS_00036459-protein ID=TCONS_00036459-protein|Name=TCONS_00036459-protein|organism=Clytia hemisphaerica|type=polypeptide|length=562bp
MNLLTAAILLETLFTIIFFGAIFVFGVCCNILSCFISWLYIVGFLSLLYW
FLVTERTPSPQETRKRKDTFVVIVGAGYSGLCAAIRLKKERIRFVLIEKS
ETLGGTWWDNKYPGCACDIPSHFYSLSFKLNAFWTKMYSSGDEIQDYLED
TADYYGIREHVKFGCKVETCEFNRETQKWSVKTSTGQEFECNYLISGMGA
LHAPKFPSLKGMEEFQGEHFHTAQWKDDFDWSGKRVGIIGTGSSSIQAVP
KLAERCEELYVFQRTPAWIFPLLNLRYPAIIQKLFQAFPFVMKLHRLYFF
FRFEFVFAAFFGKVSIAREIISNLTNQLMSNEVADPKLAEKLIPKYSMFS
KRITISNDYLKTFNRPNVHLITEPIQEITHDSILLKNNQDASAKEVELDA
IIYATGFDVLQSSTNMDIKNPNNGKSLSTIWGETPNAYMGIMPAGIPNFF
MLFGPGTVLGHSSAIFMTECQIDFMMKTITRSIDNNCASVEVTQEMNEGY
KSYVTEELKKVVYGTSPECKGWYYNESGTNYTLWPASCLHYWWKTSQVNF
EDFKTTKTCDKE
Run BLAST on NCBI

transcript from alignment at sc0001463:40091..46148+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036459 ID=TCONS_00036459|Name=TCONS_00036459|organism=Clytia hemisphaerica|type=transcript|length=6058bp|location=Sequence derived from alignment at sc0001463:40091..46148+ (Clytia hemisphaerica)
TCAGGGTATAAGATATTAAAATGAATTTGCTAACGGCTGCAATTCTTTTG GAGACTTTATTTACAATTATTTTCTTTGGGGCCATCTTTGTATTTGGAGT TTGCTGCAACATTTTGTCGTGTTTCATCTCATGGTTGTACATTGTTGGAT TTCTCTCCCTTCTTTATTGGTTTTTGGTCACCGAGAGAACTCCTTCACCA CAAGAAACTCGAAAGCGTAAAGATACTTTTGTTGTCATCGTTGGTGCTGG CTATTCCGGACTATGTGCGGCTATCCGGTTGAAAAAAGAACGTATCCGCT TTGTTTTGATCGAGAAATCGGAAACGCTTGGCGGAACCTGGTGGGATAAC AAATATCCAGGGTGTGCTTGTGACATTCCCTCACATTTTTATAGTTTATC CTTTAAACTGAACGCGTTTTGGACAAAGATGTATTCTTCAGGAGATGAAA TTCAGGACTATTTAGAAGATACAGCTGATTATTACGGCATCCGAGAGCAC GTCAAATTCGGTTGCAAAGTTGAGACATGTGAATTCAACAGAGAGACACA AAAATGGTCAGTCAAAACTTCGACCGGTCAGGAATTCGAATGTAATTATC TCATCTCTGGAATGGGAGCTTTACATGCCCCTAAATTTCCCAGTTTGAAA GGAATGGAAGAATTTCAAGGAGAGCATTTTCACACTGCTCAATGGAAAGA CGATTTTGATTGGTCCGGAAAACGCGTAGGAATTATCGGTACTGGGAGCT CTTCAATTCAAGCCGTACCGAAACTCGCCGAACGTTGTGAAGAGCTTTAC GTCTTCCAAAGAACACCAGCTTGGATTTTCCCTCTCTTGAATTTGCGTTA TCCAGCTatcattcaaaaactttttcaagcTTTCCCATTTGTTATGAAGC TCCATCggttatattttttcttcagattCGAATTCGTATTTGCTGCTTTC TTCGGGAAAGTATCGATAGCCCGAGAGATTATCTCTAATCTAACCAACCA ACTCATGTCGAATGAAGTTGCCGATCCCAAATTGGCTGAGAAACTTATTC CTAAGTACTCAATGTTTAGTAAAAGAATTACCATCTCGAACGattatttg aaaacttttaatcgACCAAACGTTCATCTTATCACTGAACCGATTCAAGA AATTACCCATGATTCTATTCTCCTTAAAAATAACCAAGATGCATCAGCGA AAGAAGTGGAATTAGATGCGATCATTTATGCAACAGGATTCGACGTTTTG CAAAGTTCGACAAATATGGATATCAAAAACCCAAATAACGGAAAGTCTTT ATCAACAATTTGGGGAGAAACACCGAATGCTTACATGGGGATTATGCCAG CCGGAATACCGAATTTTTTCATGCTCTTCGGACCCGGAACTGTGTTAGGT AAGATTTGTTTTGATGGCTGGTGAGCAGCTTCAGGGTTAGACTCTCACAA ATTACACAAGCAAATAAATTTCATGAATAAGCATGTGTTGTATCATATGG ATGAAAAAATGGATAAAGACTCGGGTTTGATTTTTATGTGTGATGAATGT GTGTTTTTCATGTGTATGGAAGAGGAAGCTTTAATGAATCCATGCGATAT TCATTTGCCACTACCGGCAGAAATCACATCATCATGAATAGTATGAATTC CTTAATTTCTTcatgatttcttttcaaatctatttcactttcatttttta ttcagGGCACAGCAGTGCGATCTTTATGACGGAATGTCAAATAGATTTTA TGATGAAGACGATTACTCGATCCATTGATAACAATTGTGCTTCTGTCGAA GTAAGTCACTNTGTACAAATTGGGTCtaaaattgtgtgtgcttatacaga actttttattttctggctggagaaaatatcttttcaaaacaaaatttaat ggatgacaaaattgaacgcaaaNGCGTCCACCAACGGATTAGTgctacct gtggttttgtagaggtctgtatTCAGACTggttttctattttggtgtttt tgcggcCCTACCTGGGGCTCATGGAGGTGAAAAGGTACCTTTGACCAGCG GTACATCCCTGTACCCCTTTTTGCTTAAGTCCCTCCCGGGTTTATGTACT CTgcaccagagtgtatctcacgtttatcgcttacACTCTGTGCACATTGT CTGTTAAAAAAATCCCATACGGAGACCCCTGCGATAAAgtttgatttata aatagcaacactactctcatcgtctcccctctctcgccaacactccatcg cagcgttCAGTTTGaataatctcaaatgagaaaagacaatgacaacagac cctctacggcaatagattttgaaatcagccgtagatattgggtcTTTGTA CAGACAAGGGTTTATgcaaccatggaggtataaagaaacaggagaagtat gctattgtaaccatgctcgccctacgattaaagaaattacgaggtatgca tgctcataatctcatatatcgtgcatttttaatgagcttttTTGTTGATA gttgaaatcttattggctaacttaaatgttggaaataagatgagacgaga aacattgtttctgacattggtgtaagaaaatatttggattaaaaaaaggc ctgtaaactttgcaatccttcatcaaatgacaagatttttcgatcaacat tttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgagcaaa cttgagttctactaaaaagtcgtatttaatcgggcgagcctagaatttct tttgatttattacataaaagaaatcaaaagactttaacgacgaCCAATTa acgacaaattcatctcctgtctttctttatacctctatgatgcAACTAGG GGTTGAATACGAAATTGATAATTTTGGAGAGtaagaatacaccttttcga ccgtagtcgcgcagtcaccctaaactcgatccatccaatccttttttaaa cttttttcttatgTCTTTAGATGcgaaaaaaaggactgggacggttttag ggtggtaaaacggacaaaaaaaatgcccgcgcggcaattggcggctacgg tcgaaaaggtgtactCATAAGTTTGTAATACCTTAATTGGATCGAGTTct tttatacacccctgtctcagtgccccggtggcatgatttcagtacatgat ttttttcagtacatggtttcagtacatgattttttcctacgtcactgcag NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttactgcagtgac gtaggaaaaaatcatgtactgaaaccatgtactgaaaaaaatcatgtact gaaatcatgccaccggggcactgagacaggggtgtttttatcGGATTTAA TTATCAGTTAtagccactgacctttatataccctggacaaagcttctcca tcccagccaagcaaaatctttgatcggtgttttttgaaaattggtaccct aatgtctgcactactcgatagcggtgtaaatgcatcgagagcgctaggtc tacttttcctcaaattcttttgatgatgtagcggcgttagacgttaattt ttaacattgcaatggcttctccttgggtaccaattctaaaaaaACTCCAA TCAAAGATGGCAGATATTGTTTGGTCCAGGGTTATATAAAGGTCAGTGGT TATAGCTATTGCTTTCGGTCCTCTTTTTCTATCCACTATGTGAATATTTT CGCATACATAATTAGAATCATTGGAATGATTTAACGCAGGGTCAGCATAT CCTGGCTCATTAAATCTAAGGTAACTCACAACTAAAGGTCTAATAACTTA ACATGAAGATAAAGTTTTAAGATTGAAAAATGCACGTTTGAATGGTAGCC TTCCTGATTtgcctctttttcaaaaattatttatggGAAGTCGCTTTTGA AAGCGAGGCCACGTAGCGACTGAGTCACTTCAGAATttgtttagaatttt ttttgttttcgtttttcagGTGACACAAGAAATGAATGAGGGTTATAAAT CTTACGTCACCGAAGAATTAAAGAAAGTTGTTTACGGAACATCTCCTGAA TGTAAAGGCTGGTATTACAACGAGAGTGGAACGAATTATACTTTATGGCC AGCTAGTTGTTTGCATTATTGGTGGAAAACCTCGCAAGTGAATTTCGAAG ATTTTAAGACCACCAAGACTTGTGACAAGGAGTGAAATCTAATCCTAAGA AAACCTTAATAACTTGTTACTTTATTTGCCTTTTTAAGCAGGACCTTATA AGCATTGTTTTTTGCCTTGATGTGGATTATtaggggaaatttgttcgttt tgcCGTTGAGGtaaggtacagaaatcacctatactcgcaatatatctcta atcttaatttttgagagctttccaaaaatatacaacaggtctccgttttc tcacgctaaaattttcattattttttggccctatgatttttgcctgagac cgtcatatttgtccgaaaacacaccaaagtgtccgaaagaaaaactggca cccaagttattttgattcccctaccccttagcttttcaaaaatgtataac aagtgctttgactaaaaaaatcgagcgattttaaaaatttccctgTACTC ATCGACCTCTAACGGACCGACCGTTAGAGGTCGATGCTGTACTATAGAGC TCCGACGTTGAAATAGGCTATAATATGTATAAAtaagttttttatttcta aCTAAAAAGCAGGGGTTAGCTGTTGCCTGACTGTTTTTTATTCCATTTCA TTTGACACTATCTTGACGTAATCTCAAAATTTGACAGAATCGGATTAAAG GAACTGACGTTTGCATAAAAACAATTATCAAGACCCGTGTCCTCAGTCCT TTAAATAGATTAGTCCgggaaaaatggcattttgcttaacccaagattct acaggataaactatacaatCTTGGAAACCTtaactatcctagtttaagaa atggtcggtccccaaagctaactcctggtcaatttttcatactgggccca aatttagggggtactttttcccctttgtaaggatttgttaaggaaaatat ctttccatgtatgatataatttgctatatctcatgaataaattgaccaat tgctttgaaactttgccaaaagtttcaagataGATTGGTGATCGTCATTG GCAAAAAGGTTAtccgaaaaattatttttgggggtttacctggggaaaaa agggaaaatttgggtattttcactgaattttgacactttataagactggg acctaccaaaacaacttttaatgaggcacaaactttgtgttatgataaaa tttgatgcgatacaccagaaaaatttcttggCAACTGTATTTAGTATCAT TTTCGACG

Coding sequence (CDS) from alignment at sc0001463:40091..46148+

>TCONS_00036459 ID=TCONS_00036459|Name=TCONS_00036459|organism=Clytia hemisphaerica|type=CDS|length=5067bp|location=Sequence derived from alignment at sc0001463:40091..46148+ (Clytia hemisphaerica)
ATGAATTTGCTAACGGCTGCAATTCTTTTGGAGACTTTATTTACAATTAT
TTTCTTTGGGGCCATCTTTGTATTTGGAGTTTGCTGCAACATTTTGTCGT
GTTTCATCTCATGGTTGTACATTGTTGGATTTCTCTCCCTTCTTTATTGG
TTTTTGGTCACCGAGAGAACTCCTTCACCACAAGAAACTCGAAAGCGTAA
AGATACTTTTGTTGTCATCGTTGGTGCTGGCTATTCCGGACTATGTGCGG
CTATCCGGTTGAAAAAAGAACGTATCCGCTTTGTTTTGATCGAGAAATCG
GAAACGCTTGGCGGAACCTGGTGGGATAACAAATATCCAGGGTGTGCTTG
TGACATTCCCTCACATTTTTATAGTTTATCCTTTAAACTGAACGCGTTTT
GGACAAAGATGTATTCTTCAGGAGATGAAATTCAGGACTATTTAGAAGAT
ACAGCTGATTATTACGGCATCCGAGAGCACGTCAAATTCGGTTGCAAAGT
TGAGACATGTGAATTCAACAGAGAGACACAAAAATGGTCAGTCAAAACTT
CGACCGGTCAGGAATTCGAATGTAATTATCTCATCTCTGGAATGGGAGCT
TTACATGCCCCTAAATTTCCCAGTTTGAAAGGAATGGAAGAATTTCAAGG
AGAGCATTTTCACACTGCTCAATGGAAAGACGATTTTGATTGGTCCGGAA
AACGCGTAGGAATTATCGGTACTGGGAGCTCTTCAATTCAAGCCGTACCG
AAACTCGCCGAACGTTGTGAAGAGCTTTACGTCTTCCAAAGAACACCAGC
TTGGATTTTCCCTCTCTTGAATTTGCGTTATCCAGCTatcattcaaaaac
tttttcaagcTTTCCCATTTGTTATGAAGCTCCATCggttatattttttc
ttcagattCGAATTCGTATTTGCTGCTTTCTTCGGGAAAGTATCGATAGC
CCGAGAGATTATCTCTAATCTAACCAACCAACTCATGTCGAATGAAGTTG
CCGATCCCAAATTGGCTGAGAAACTTATTCCTAAGTACTCAATGTTTAGT
AAAAGAATTACCATCTCGAACGattatttgaaaacttttaatcgACCAAA
CGTTCATCTTATCACTGAACCGATTCAAGAAATTACCCATGATTCTATTC
TCCTTAAAAATAACCAAGATGCATCAGCGAAAGAAGTGGAATTAGATGCG
ATCATTTATGCAACAGGATTCGACGTTTTGCAAAGTTCGACAAATATGGA
TATCAAAAACCCAAATAACGGAAAGTCTTTATCAACAATTTGGGGAGAAA
CACCGAATGCTTACATGGGGATTATGCCAGCCGGAATACCGAATTTTTTC
ATGCTCTTCGGACCCGGAACTGTGTTAGGGCACAGCAGTGCGATCTTTAT
GACGGAATGTCAAATAGATTTTATGATGAAGACGATTACTCGATCCATTG
ATAACAATTGTGCTTCTGTCGAAGTGACACAAGAAATGAATGAGGGTTAT
AAATCTTACGTCACCGAAGAATTAAAGAAAGTTGTTTACGGAACATCTCC
TGAATGTAAAGGCTGGTATTACAACGAGAGTGGAACGAATTATACTTTAT
GGCCAGCTAGTTGTTTGCATTATTGGTGGAAAACCTCGCAAGTGAATTTC
GAAGATTTTAAGACCACCAAGACTTGTGACAAGGAGTGAATGAATTTGCT
AACGGCTGCAATTCTTTTGGAGACTTTATTTACAATTATTTTCTTTGGGG
CCATCTTTGTATTTGGAGTTTGCTGCAACATTTTGTCGTGTTTCATCTCA
TGGTTGTACATTGTTGGATTTCTCTCCCTTCTTTATTGGTTTTTGGTCAC
CGAGAGAACTCCTTCACCACAAGAAACTCGAAAGCGTAAAGATACTTTTG
TTGTCATCGTTGGTGCTGGCTATTCCGGACTATGTGCGGCTATCCGGTTG
AAAAAAGAACGTATCCGCTTTGTTTTGATCGAGAAATCGGAAACGCTTGG
CGGAACCTGGTGGGATAACAAATATCCAGGGTGTGCTTGTGACATTCCCT
CACATTTTTATAGTTTATCCTTTAAACTGAACGCGTTTTGGACAAAGATG
TATTCTTCAGGAGATGAAATTCAGGACTATTTAGAAGATACAGCTGATTA
TTACGGCATCCGAGAGCACGTCAAATTCGGTTGCAAAGTTGAGACATGTG
AATTCAACAGAGAGACACAAAAATGGTCAGTCAAAACTTCGACCGGTCAG
GAATTCGAATGTAATTATCTCATCTCTGGAATGGGAGCTTTACATGCCCC
TAAATTTCCCAGTTTGAAAGGAATGGAAGAATTTCAAGGAGAGCATTTTC
ACACTGCTCAATGGAAAGACGATTTTGATTGGTCCGGAAAACGCGTAGGA
ATTATCGGTACTGGGAGCTCTTCAATTCAAGCCGTACCGAAACTCGCCGA
ACGTTGTGAAGAGCTTTACGTCTTCCAAAGAACACCAGCTTGGATTTTCC
CTCTCTTGAATTTGCGTTATCCAGCTatcattcaaaaactttttcaagcT
TTCCCATTTGTTATGAAGCTCCATCggttatattttttcttcagattCGA
ATTCGTATTTGCTGCTTTCTTCGGGAAAGTATCGATAGCCCGAGAGATTA
TCTCTAATCTAACCAACCAACTCATGTCGAATGAAGTTGCCGATCCCAAA
TTGGCTGAGAAACTTATTCCTAAGTACTCAATGTTTAGTAAAAGAATTAC
CATCTCGAACGattatttgaaaacttttaatcgACCAAACGTTCATCTTA
TCACTGAACCGATTCAAGAAATTACCCATGATTCTATTCTCCTTAAAAAT
AACCAAGATGCATCAGCGAAAGAAGTGGAATTAGATGCGATCATTTATGC
AACAGGATTCGACGTTTTGCAAAGTTCGACAAATATGGATATCAAAAACC
CAAATAACGGAAAGTCTTTATCAACAATTTGGGGAGAAACACCGAATGCT
TACATGGGGATTATGCCAGCCGGAATACCGAATTTTTTCATGCTCTTCGG
ACCCGGAACTGTGTTAGGGCACAGCAGTGCGATCTTTATGACGGAATGTC
AAATAGATTTTATGATGAAGACGATTACTCGATCCATTGATAACAATTGT
GCTTCTGTCGAAGTGACACAAGAAATGAATGAGGGTTATAAATCTTACGT
CACCGAAGAATTAAAGAAAGTTGTTTACGGAACATCTCCTGAATGTAAAG
GCTGGTATTACAACGAGAGTGGAACGAATTATACTTTATGGCCAGCTAGT
TGTTTGCATTATTGGTGGAAAACCTCGCAAGTGAATTTCGAAGATTTTAA
GACCACCAAGACTTGTGACAAGGAGTGAATGAATTTGCTAACGGCTGCAA
TTCTTTTGGAGACTTTATTTACAATTATTTTCTTTGGGGCCATCTTTGTA
TTTGGAGTTTGCTGCAACATTTTGTCGTGTTTCATCTCATGGTTGTACAT
TGTTGGATTTCTCTCCCTTCTTTATTGGTTTTTGGTCACCGAGAGAACTC
CTTCACCACAAGAAACTCGAAAGCGTAAAGATACTTTTGTTGTCATCGTT
GGTGCTGGCTATTCCGGACTATGTGCGGCTATCCGGTTGAAAAAAGAACG
TATCCGCTTTGTTTTGATCGAGAAATCGGAAACGCTTGGCGGAACCTGGT
GGGATAACAAATATCCAGGGTGTGCTTGTGACATTCCCTCACATTTTTAT
AGTTTATCCTTTAAACTGAACGCGTTTTGGACAAAGATGTATTCTTCAGG
AGATGAAATTCAGGACTATTTAGAAGATACAGCTGATTATTACGGCATCC
GAGAGCACGTCAAATTCGGTTGCAAAGTTGAGACATGTGAATTCAACAGA
GAGACACAAAAATGGTCAGTCAAAACTTCGACCGGTCAGGAATTCGAATG
TAATTATCTCATCTCTGGAATGGGAGCTTTACATGCCCCTAAATTTCCCA
GTTTGAAAGGAATGGAAGAATTTCAAGGAGAGCATTTTCACACTGCTCAA
TGGAAAGACGATTTTGATTGGTCCGGAAAACGCGTAGGAATTATCGGTAC
TGGGAGCTCTTCAATTCAAGCCGTACCGAAACTCGCCGAACGTTGTGAAG
AGCTTTACGTCTTCCAAAGAACACCAGCTTGGATTTTCCCTCTCTTGAAT
TTGCGTTATCCAGCTatcattcaaaaactttttcaagcTTTCCCATTTGT
TATGAAGCTCCATCggttatattttttcttcagattCGAATTCGTATTTG
CTGCTTTCTTCGGGAAAGTATCGATAGCCCGAGAGATTATCTCTAATCTA
ACCAACCAACTCATGTCGAATGAAGTTGCCGATCCCAAATTGGCTGAGAA
ACTTATTCCTAAGTACTCAATGTTTAGTAAAAGAATTACCATCTCGAACG
attatttgaaaacttttaatcgACCAAACGTTCATCTTATCACTGAACCG
ATTCAAGAAATTACCCATGATTCTATTCTCCTTAAAAATAACCAAGATGC
ATCAGCGAAAGAAGTGGAATTAGATGCGATCATTTATGCAACAGGATTCG
ACGTTTTGCAAAGTTCGACAAATATGGATATCAAAAACCCAAATAACGGA
AAGTCTTTATCAACAATTTGGGGAGAAACACCGAATGCTTACATGGGGAT
TATGCCAGCCGGAATACCGAATTTTTTCATGCTCTTCGGACCCGGAACTG
TGTTAGGGCACAGCAGTGCGATCTTTATGACGGAATGTCAAATAGATTTT
ATGATGAAGACGATTACTCGATCCATTGATAACAATTGTGCTTCTGTCGA
AGTGACACAAGAAATGAATGAGGGTTATAAATCTTACGTCACCGAAGAAT
TAAAGAAAGTTGTTTACGGAACATCTCCTGAATGTAAAGGCTGGTATTAC
AACGAGAGTGGAACGAATTATACTTTATGGCCAGCTAGTTGTTTGCATTA
TTGGTGGAAAACCTCGCAAGTGAATTTCGAAGATTTTAAGACCACCAAGA
CTTGTGACAAGGAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021488XLOC_021488Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036459-proteinTCONS_00036459-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036459-exon-sc0001463-1491911889:40091..41488TCONS_00036459-exon-sc0001463-1491911889:40091..41488Clytia hemisphaericaexon
TCONS_00036459-exon-sc0001463-1510915933:40091..41488TCONS_00036459-exon-sc0001463-1510915933:40091..41488Clytia hemisphaericaexon
TCONS_00036459-exon-sc0001463-1575043694:40091..41488TCONS_00036459-exon-sc0001463-1575043694:40091..41488Clytia hemisphaericaexon
TCONS_00036459-exon-sc0001463-1491911889:41796..41890TCONS_00036459-exon-sc0001463-1491911889:41796..41890Clytia hemisphaericaexon
TCONS_00036459-exon-sc0001463-1510915933:41796..41890TCONS_00036459-exon-sc0001463-1510915933:41796..41890Clytia hemisphaericaexon
TCONS_00036459-exon-sc0001463-1575043694:41796..41890TCONS_00036459-exon-sc0001463-1575043694:41796..41890Clytia hemisphaericaexon
TCONS_00036459-exon-sc0001463-1491911889:44760..46148TCONS_00036459-exon-sc0001463-1491911889:44760..46148Clytia hemisphaericaexon
TCONS_00036459-exon-sc0001463-1510915933:44760..46148TCONS_00036459-exon-sc0001463-1510915933:44760..46148Clytia hemisphaericaexon
TCONS_00036459-exon-sc0001463-1575043694:44760..46148TCONS_00036459-exon-sc0001463-1575043694:44760..46148Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001463supercontigsc0001463:40091..46148 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.65658 3.05826 2.0762 2.0118 1.32133 1.42439 2.40994 2.26198 1.23683 1.47994 1.58769 1.16416 4.32863 3.68961 5.60388 6.36457 2.79242 2.95266 4.95124 3.87961 1.90646 2.46822 3.02863 2.5884 1.46459 2.40289 2.23004 2.16645 4.13911 3.33065
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000103Pyridine_nuc-diS_OxRdtase_2
IPR023753FAD/NAD-binding_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036459 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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