XLOC_021488 (gene) - C. hemisphaerica

Overview
NameXLOC_021488
Unique NameXLOC_021488
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001463:40091..46148+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021488 ID=XLOC_021488|Name=XLOC_021488|organism=Clytia hemisphaerica|type=gene|length=6058bp|location=Sequence derived from alignment at sc0001463:40091..46148+ (Clytia hemisphaerica)
TCAGGGTATAAGATATTAAAATGAATTTGCTAACGGCTGCAATTCTTTTG
GAGACTTTATTTACAATTATTTTCTTTGGGGCCATCTTTGTATTTGGAGT
TTGCTGCAACATTTTGTCGTGTTTCATCTCATGGTTGTACATTGTTGGAT
TTCTCTCCCTTCTTTATTGGTTTTTGGTCACCGAGAGAACTCCTTCACCA
CAAGAAACTCGAAAGCGTAAAGATACTTTTGTTGTCATCGTTGGTGCTGG
CTATTCCGGACTATGTGCGGCTATCCGGTTGAAAAAAGAACGTATCCGCT
TTGTTTTGATCGAGAAATCGGAAACGCTTGGCGGAACCTGGTGGGATAAC
AAATATCCAGGGTGTGCTTGTGACATTCCCTCACATTTTTATAGTTTATC
CTTTAAACTGAACGCGTTTTGGACAAAGATGTATTCTTCAGGAGATGAAA
TTCAGGACTATTTAGAAGATACAGCTGATTATTACGGCATCCGAGAGCAC
GTCAAATTCGGTTGCAAAGTTGAGACATGTGAATTCAACAGAGAGACACA
AAAATGGTCAGTCAAAACTTCGACCGGTCAGGAATTCGAATGTAATTATC
TCATCTCTGGAATGGGAGCTTTACATGCCCCTAAATTTCCCAGTTTGAAA
GGAATGGAAGAATTTCAAGGAGAGCATTTTCACACTGCTCAATGGAAAGA
CGATTTTGATTGGTCCGGAAAACGCGTAGGAATTATCGGTACTGGGAGCT
CTTCAATTCAAGCCGTACCGAAACTCGCCGAACGTTGTGAAGAGCTTTAC
GTCTTCCAAAGAACACCAGCTTGGATTTTCCCTCTCTTGAATTTGCGTTA
TCCAGCTatcattcaaaaactttttcaagcTTTCCCATTTGTTATGAAGC
TCCATCggttatattttttcttcagattCGAATTCGTATTTGCTGCTTTC
TTCGGGAAAGTATCGATAGCCCGAGAGATTATCTCTAATCTAACCAACCA
ACTCATGTCGAATGAAGTTGCCGATCCCAAATTGGCTGAGAAACTTATTC
CTAAGTACTCAATGTTTAGTAAAAGAATTACCATCTCGAACGattatttg
aaaacttttaatcgACCAAACGTTCATCTTATCACTGAACCGATTCAAGA
AATTACCCATGATTCTATTCTCCTTAAAAATAACCAAGATGCATCAGCGA
AAGAAGTGGAATTAGATGCGATCATTTATGCAACAGGATTCGACGTTTTG
CAAAGTTCGACAAATATGGATATCAAAAACCCAAATAACGGAAAGTCTTT
ATCAACAATTTGGGGAGAAACACCGAATGCTTACATGGGGATTATGCCAG
CCGGAATACCGAATTTTTTCATGCTCTTCGGACCCGGAACTGTGTTAGGT
AAGATTTGTTTTGATGGCTGGTGAGCAGCTTCAGGGTTAGACTCTCACAA
ATTACACAAGCAAATAAATTTCATGAATAAGCATGTGTTGTATCATATGG
ATGAAAAAATGGATAAAGACTCGGGTTTGATTTTTATGTGTGATGAATGT
GTGTTTTTCATGTGTATGGAAGAGGAAGCTTTAATGAATCCATGCGATAT
TCATTTGCCACTACCGGCAGAAATCACATCATCATGAATAGTATGAATTC
CTTAATTTCTTcatgatttcttttcaaatctatttcactttcatttttta
ttcagGGCACAGCAGTGCGATCTTTATGACGGAATGTCAAATAGATTTTA
TGATGAAGACGATTACTCGATCCATTGATAACAATTGTGCTTCTGTCGAA
GTAAGTCACTNTGTACAAATTGGGTCtaaaattgtgtgtgcttatacaga
actttttattttctggctggagaaaatatcttttcaaaacaaaatttaat
ggatgacaaaattgaacgcaaaNGCGTCCACCAACGGATTAGTgctacct
gtggttttgtagaggtctgtatTCAGACTggttttctattttggtgtttt
tgcggcCCTACCTGGGGCTCATGGAGGTGAAAAGGTACCTTTGACCAGCG
GTACATCCCTGTACCCCTTTTTGCTTAAGTCCCTCCCGGGTTTATGTACT
CTgcaccagagtgtatctcacgtttatcgcttacACTCTGTGCACATTGT
CTGTTAAAAAAATCCCATACGGAGACCCCTGCGATAAAgtttgatttata
aatagcaacactactctcatcgtctcccctctctcgccaacactccatcg
cagcgttCAGTTTGaataatctcaaatgagaaaagacaatgacaacagac
cctctacggcaatagattttgaaatcagccgtagatattgggtcTTTGTA
CAGACAAGGGTTTATgcaaccatggaggtataaagaaacaggagaagtat
gctattgtaaccatgctcgccctacgattaaagaaattacgaggtatgca
tgctcataatctcatatatcgtgcatttttaatgagcttttTTGTTGATA
gttgaaatcttattggctaacttaaatgttggaaataagatgagacgaga
aacattgtttctgacattggtgtaagaaaatatttggattaaaaaaaggc
ctgtaaactttgcaatccttcatcaaatgacaagatttttcgatcaacat
tttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgagcaaa
cttgagttctactaaaaagtcgtatttaatcgggcgagcctagaatttct
tttgatttattacataaaagaaatcaaaagactttaacgacgaCCAATTa
acgacaaattcatctcctgtctttctttatacctctatgatgcAACTAGG
GGTTGAATACGAAATTGATAATTTTGGAGAGtaagaatacaccttttcga
ccgtagtcgcgcagtcaccctaaactcgatccatccaatccttttttaaa
cttttttcttatgTCTTTAGATGcgaaaaaaaggactgggacggttttag
ggtggtaaaacggacaaaaaaaatgcccgcgcggcaattggcggctacgg
tcgaaaaggtgtactCATAAGTTTGTAATACCTTAATTGGATCGAGTTct
tttatacacccctgtctcagtgccccggtggcatgatttcagtacatgat
ttttttcagtacatggtttcagtacatgattttttcctacgtcactgcag
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttactgcagtgac
gtaggaaaaaatcatgtactgaaaccatgtactgaaaaaaatcatgtact
gaaatcatgccaccggggcactgagacaggggtgtttttatcGGATTTAA
TTATCAGTTAtagccactgacctttatataccctggacaaagcttctcca
tcccagccaagcaaaatctttgatcggtgttttttgaaaattggtaccct
aatgtctgcactactcgatagcggtgtaaatgcatcgagagcgctaggtc
tacttttcctcaaattcttttgatgatgtagcggcgttagacgttaattt
ttaacattgcaatggcttctccttgggtaccaattctaaaaaaACTCCAA
TCAAAGATGGCAGATATTGTTTGGTCCAGGGTTATATAAAGGTCAGTGGT
TATAGCTATTGCTTTCGGTCCTCTTTTTCTATCCACTATGTGAATATTTT
CGCATACATAATTAGAATCATTGGAATGATTTAACGCAGGGTCAGCATAT
CCTGGCTCATTAAATCTAAGGTAACTCACAACTAAAGGTCTAATAACTTA
ACATGAAGATAAAGTTTTAAGATTGAAAAATGCACGTTTGAATGGTAGCC
TTCCTGATTtgcctctttttcaaaaattatttatggGAAGTCGCTTTTGA
AAGCGAGGCCACGTAGCGACTGAGTCACTTCAGAATttgtttagaatttt
ttttgttttcgtttttcagGTGACACAAGAAATGAATGAGGGTTATAAAT
CTTACGTCACCGAAGAATTAAAGAAAGTTGTTTACGGAACATCTCCTGAA
TGTAAAGGCTGGTATTACAACGAGAGTGGAACGAATTATACTTTATGGCC
AGCTAGTTGTTTGCATTATTGGTGGAAAACCTCGCAAGTGAATTTCGAAG
ATTTTAAGACCACCAAGACTTGTGACAAGGAGTGAAATCTAATCCTAAGA
AAACCTTAATAACTTGTTACTTTATTTGCCTTTTTAAGCAGGACCTTATA
AGCATTGTTTTTTGCCTTGATGTGGATTATtaggggaaatttgttcgttt
tgcCGTTGAGGtaaggtacagaaatcacctatactcgcaatatatctcta
atcttaatttttgagagctttccaaaaatatacaacaggtctccgttttc
tcacgctaaaattttcattattttttggccctatgatttttgcctgagac
cgtcatatttgtccgaaaacacaccaaagtgtccgaaagaaaaactggca
cccaagttattttgattcccctaccccttagcttttcaaaaatgtataac
aagtgctttgactaaaaaaatcgagcgattttaaaaatttccctgTACTC
ATCGACCTCTAACGGACCGACCGTTAGAGGTCGATGCTGTACTATAGAGC
TCCGACGTTGAAATAGGCTATAATATGTATAAAtaagttttttatttcta
aCTAAAAAGCAGGGGTTAGCTGTTGCCTGACTGTTTTTTATTCCATTTCA
TTTGACACTATCTTGACGTAATCTCAAAATTTGACAGAATCGGATTAAAG
GAACTGACGTTTGCATAAAAACAATTATCAAGACCCGTGTCCTCAGTCCT
TTAAATAGATTAGTCCgggaaaaatggcattttgcttaacccaagattct
acaggataaactatacaatCTTGGAAACCTtaactatcctagtttaagaa
atggtcggtccccaaagctaactcctggtcaatttttcatactgggccca
aatttagggggtactttttcccctttgtaaggatttgttaaggaaaatat
ctttccatgtatgatataatttgctatatctcatgaataaattgaccaat
tgctttgaaactttgccaaaagtttcaagataGATTGGTGATCGTCATTG
GCAAAAAGGTTAtccgaaaaattatttttgggggtttacctggggaaaaa
agggaaaatttgggtattttcactgaattttgacactttataagactggg
acctaccaaaacaacttttaatgaggcacaaactttgtgttatgataaaa
tttgatgcgatacaccagaaaaatttcttggCAACTGTATTTAGTATCAT
TTTCGACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036459TCONS_00036459Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036459-proteinTCONS_00036459-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001463supercontigsc0001463:40091..46148 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.66	3.06	2.08	2.01	1.32	1.42	2.41	2.26	1.24	1.48	1.59	1.16	4.33	3.69	5.6	6.36	2.79	2.95	4.95	3.88	1.91	2.47	3.03	2.59	1.46	2.4	2.23	2.17	4.14	3.33