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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036402 ID=TCONS_00036402|Name=TCONS_00036402|organism=Clytia hemisphaerica|type=transcript|length=1248bp
GTATAATTCTGAAAGAACACTCAATTTGCATACAAAGTGGCTCTCATTGG
ACTACCCAAGCTCTTGTGGTGTGGTTCAAAGTTTTCGTATATAATTCAAC
ATTTCTTGACGACAAAGACCAGGCTGCACAAGCCGTCTCCATGACCATAT
AAGTGACTAGCACTTGGATTTATCACTGATTTATTTGCTCAAATCACATA
CAATGGCCTTTGTTTACAACAGAAAGGTCATTTGACCAATTTCATCTCAT
GGAcatttatgattttcaagtttaCCGCATGACACCCTGAATGGACGTAG
CATAACTTACGTTATTGCTGTACatggttaaaatttgaaaatggacaTAT
TAACTGGCTAATTCCTAGCaagacatcattaaatataCTTAGAATGTCTA
GTTTCATGATTTTGAACCCTTGAAATAGACTCATAAGAAGAATTTCATGT
CATGAAACTGATAGTAgatttattacaattttataCCATTTCCTGTCATT
TTACGCGTTCACcgaaatatcaatattttcagtttttgtaaagCCTTAGG
TCTAAAATTTTCAGCATTTGATTGCCCCTTGTTTGCTTAAATTTGTGCAT
ATTTTTTACACATTTCAGCGAAGACTCATAAGACAATTATCATCTGGCAA
ACCTGCGAGAAAGGCTTTGCTTTCGGCATTGGACTCGCTGATGACTAGAG
CTGTGCAAGGTCAATTTTCAAAAGCTGGCAAGAAAGGAAAACTGAACTTT
CAAGACACCCATCATTATACGTGCATTATGAATGCCTTACAAGAAAAGTA
TAAAGACAACGATTTGGATTGGATGATAGGTGACATTATGAAACATGCTC
CTAAAGAAAAGAAGCGAAAACAGCAACCAAAAAGTAATGGGAAAGAAAAG
AAACGAATGATTCAAGATAGTGGTGCGTATGGAGGTGGTGCTTGCGGTAA
TGCCAGAGATGATAATGATAGTAGTGATGATGATTGATTTTTAGATAAGG
ATAAGAATAACCAGAGATTTATTAGCCAATTCCAAATTTGATTTAACATC
TCTTTCTTGTTAATAGATTTCTATACTCTGACGAGGACGTCTTGTAGTGA
AGGTCGAATATACAGATTTTAACAGACATGAAGTTTCAGCTTATTCTTTT
CATCATGAAGATCAATCGTTTATTTAATTTGTCCatataataaaattaaa
agGGTAATTAGATGATAAGAGATATTTGGACTGTAGATttcaacaccc Run BLAST on NCBI transcript from alignment at sc0001454:46097..48652- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036402 ID=TCONS_00036402|Name=TCONS_00036402|organism=Clytia hemisphaerica|type=transcript|length=2556bp|location=Sequence derived from alignment at sc0001454:46097..48652- (Clytia hemisphaerica)
GTATAATTCTGAAAGAACACTCAATTTGCATACAAAGTGGCTCTCATTGG
ACTACCCAAGCTCTTGTGGTGTGGTTCAAAGTTTTCGTATATAATTCAAC
ATTTCTTGACGACAAAGACCAGGCTGCACAAGCCGTCTCCATGACCATAT
AAGTGACTAGCACTTGGATTTATCACTGATTTATTTGCTCAAATCACATA
CAATGGCCTTTGTTTACAACAGAAAGGTCATTTGACCAATTTCATCTCAT
GGACATTTATGATTTTCAAGTTTACCGCATGACACCCTGAATGGACGTAG
CATAACTTACGTTATTGCTGTACATGGTTAAAATTTGAAAATGGACATAT
TAACTGGCTAATTCCTAGCAAGACATCATTAAATATACTTAGAATGTCTA
GTTTCATGATTTTGAACCCTTGAAATAGACTCATAAGAAGAATTTCATGT
CATGAAACTGATAGTAGATTTATTACAATTTTATACCATTTCCTGTCATT
TTACGCGTTCACCGAAATATCAATATTTTCAGTTTTTGTAAAGCCTTAGG
TCTAAAATTTTCAGCATTTGATTGCCCCTTGTTTGCTTAAATTTGTGCAT
ATTTTTTACACATTTCAGCGAAGACTCATAAGACAATTATCATCTGGCAA
ACCTGCGAGAAAGGCTTTGCTTTCGGCATTGGACTCGCTGATGACTAGAG
CTGTGCAAGGTCAATTTTCAAAAGCTGGCAAGAAAGGAAAACTGAACTTT
CAAGACACCCATCATTATACGTGCATTATGAGTAAGTTCTATGAATATTA
TCCAACTTATAACAACTTATTAAATTATACCAAATTTGTGGTGTAGATAA
TTTCTTTAGTGTACTTGATTCGCAATGTTTTTGATAGTTTTGTTATTAAA
TTATCATTATTTATTACAGCCTATGTATAGCTCACCTCTACAGGGTGTCC
CGAAAAAAAAGTNNNNGGGTCATTTTTTCGCAAATTTCGAGTCCCACGTA
GGGTCCATTTTTCGAACCTCAGCGGAGCACCCCCGTCGGTCGACAAGGGT
AGTACCCCCCCCGGGGTTTTTTAATTACATTGGTAATGGGTCGTTCCATT
TTATACCCATACAGGGGGTGGACGAGCATTTCCAGGGGATAAAAGACAGG
TTTTAGTCTGGCCACTTTAATGTCACTTTAATGAATTTTTCCAAGGCTTT
CTTTGTAAATTTTGCAATTTTGCAGGGGTATCCCTACATTTTTTTTTGAA
TAGAAAGGTTCGCCCACCTCTGTATGGACTTTTAATGGAACAGCTCATGA
TACTTAAATCACAATAATGCAACAATGAAACACAAAAGCAAAAACCTATA
ACATTCAAAAATCATTTAGAATGGGGCAGCAGAATAAACTGAAACTATTT
TTTGGAATATCTTTAGTCGAACGACGAATTAAAGATTGTCTTAAAGAGCA
TTATTAGATTTTGTGATACAAACACAGCTGTTTTTTGTACTTATAGAAGT
GGTAGTCTGACACAGTGCTCTTTTTCGGGACACTTTGTAATTGGAAACCA
TGATGATTATTACTGAATACCGCCTTTCAAAGTCTTTATTCTCATTTTAT
ATATTGTAATGCCGTATCAACTTGGGGGCACGGGGGGGGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGGGGGGGGGGGAGCTATGCCCCTCAATAATAAAAAAAAATGAT
TTTTTTGCAAAATGCAAAGTTTTCTTTTTTAATTTGTCATAATCGCACGA
TTGAGTGCATTTTCAAGCAATCTAGAGCTCAAATTTTCAAAATTTTCCCC
CTCGGACCAAACCATGCTTGGCCTTCACGGTGTCACTAGACTTCAGCCCC
CCCCCCCAATATCCGACGTTAAAGTATTGTTGTTACAAGAGTGCTTATCG
ATCATAAATTTATTTTAACATTTTAAATCTCTTTAACTTGTTTAACTTCT
AAATTTTGAAATAAATTCATTCTCATTTTAACGTTTTAGATGCCTTACAA
GAAAAGTATAAAGACAACGATTTGGATTGGATGATAGGTGACATTATGAA
ACATGCTCCTAAAGAAAAGAAGCGAAAACAGCAACCAAAAAGTAATGGGA
AAGAAAAGAAACGAATGATTCAAGATAGTGGTGCGTATGGAGGTGGTGCT
TGCGGTAATGCCAGAGATGATAATGATAGTAGTGATGATGATTGATTTTT
AGATAAGGATAAGAATAACCAGAGATTTATTAGCCAATTCCAAATTTGAT
TTAACATCTCTTTCTTGTTAATAGATTTCTATACTCTGACGAGGACGTCT
TGTAGTGAAGGTCGAATATACAGATTTTAACAGACATGAAGTTTCAGCTT
ATTCTTTTCATCATGAAGATCAATCGTTTATTTAATTTGTCCATATAATA
AAATTAAAAGGGTAATTAGATGATAAGAGATATTTGGACTGTAGATTTCA
ACACCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036402-exon-sc0001454-1575043694:47872..48652 | TCONS_00036402-exon-sc0001454-1575043694:47872..48652 | Clytia hemisphaerica | exon |
| TCONS_00036402-exon-sc0001454-1575043694:46097..46563 | TCONS_00036402-exon-sc0001454-1575043694:46097..46563 | Clytia hemisphaerica | exon |
| TCONS_00036402-exon-sc0001454-1510915933:47872..48652 | TCONS_00036402-exon-sc0001454-1510915933:47872..48652 | Clytia hemisphaerica | exon |
| TCONS_00036402-exon-sc0001454-1510915933:46097..46563 | TCONS_00036402-exon-sc0001454-1510915933:46097..46563 | Clytia hemisphaerica | exon |
| TCONS_00036402-exon-sc0001454-1491911889:47872..48652 | TCONS_00036402-exon-sc0001454-1491911889:47872..48652 | Clytia hemisphaerica | exon |
| TCONS_00036402-exon-sc0001454-1491911889:46097..46563 | TCONS_00036402-exon-sc0001454-1491911889:46097..46563 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001454 | supercontig | sc0001454:46097..48652 - |
Blast
The following BLAST results are available for this feature:
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