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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036380 ID=TCONS_00036380|Name=TCONS_00036380|organism=Clytia hemisphaerica|type=transcript|length=776bp
TTTTGCGTTTAAAGGTGTTATATTTgcaagaaaaatagaaattatttttt
atgttcagATGCGTAGACGTTTGAAGAGCTGCTCAAAGTCTTTATCATCG
CTATCGTCGCACTCGACATTTGATGTAGATTTTCTCTTCCGTCCTTTTGA
AACGTTTGATTCAGCTTCGTTAAGTGTTTTAGCGACATAGTCGGTTGGTG
TGAATAGCTTGTTGACTTTGGTTTCTCCTGAGCGGACATCTGATGAGATT
GTTATTTTATTGGTGAACTGGTCAGCTAATTCAGTGAAGTCATCTGTACT
TTTGTAGACTGTTGATTCACCCATTTCGACACAAGGAAGTGGACGTTGTT
GAATGAGATCATTCGCGTCTCGGCGTTTTGCTTTGATAACAACACGAGCC
TCAGTGAAAGGTTGAGATTTGAAGACAGCGTTCTTGTATGAAGCTTTCAG
AACACGATGGTACTTCTTCGAATTGATTTGAGAACGTCCAGTGTTCAACT
TCTTTATGTTTGAATTCTCCAATGCAAATGCCATTGCACGAGGATTCTTG
GATTTTCCGATTTGATGAAATTCATCTCGggattcaatttttgaatgcaa
ATCGACGACTGATTTGCGTTTTGCGGTGAAAACTTTTACACGAGTGATAT
CGACCTTTGTCTCAGAAGCAATCTTGAACAAAGATTTACTTGAAACGTTC
GAGTTTTCACCGAAGACTTTTATTTTActcaaaatacacatttttcaaGA
CTTTCTGCGACTTGATTCAACagaat Run BLAST on NCBI protein sequence of TCONS_00036380-protein >TCONS_00036380-protein ID=TCONS_00036380-protein|Name=TCONS_00036380-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MCILSKIKVFGENSNVSSKSLFKIASETKVDITRVKVFTAKRKSVVDLHS
KIESRDEFHQIGKSKNPRAMAFALENSNIKKLNTGRSQINSKKYHRVLKA
SYKNAVFKSQPFTEARVVIKAKRRDANDLIQQRPLPCVEMGESTVYKSTD
DFTELADQFTNKITISSDVRSGETKVNKLFTPTDYVAKTLNEAESNVSKG
RKRKSTSNVECDDSDDKDFEQLFKRLRI Run BLAST on NCBI transcript from alignment at sc0001452:37155..37930 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036380 ID=TCONS_00036380|Name=TCONS_00036380|organism=Clytia hemisphaerica|type=transcript|length=776bp|location=Sequence derived from alignment at sc0001452:37155..37930 (Clytia hemisphaerica)
attctGTTGAATCAAGTCGCAGAAAGTCttgaaaaatgtgtattttgagT
AAAATAAAAGTCTTCGGTGAAAACTCGAACGTTTCAAGTAAATCTTTGTT
CAAGATTGCTTCTGAGACAAAGGTCGATATCACTCGTGTAAAAGTTTTCA
CCGCAAAACGCAAATCAGTCGTCGATttgcattcaaaaattgaatccCGA
GATGAATTTCATCAAATCGGAAAATCCAAGAATCCTCGTGCAATGGCATT
TGCATTGGAGAATTCAAACATAAAGAAGTTGAACACTGGACGTTCTCAAA
TCAATTCGAAGAAGTACCATCGTGTTCTGAAAGCTTCATACAAGAACGCT
GTCTTCAAATCTCAACCTTTCACTGAGGCTCGTGTTGTTATCAAAGCAAA
ACGCCGAGACGCGAATGATCTCATTCAACAACGTCCACTTCCTTGTGTCG
AAATGGGTGAATCAACAGTCTACAAAAGTACAGATGACTTCACTGAATTA
GCTGACCAGTTCACCAATAAAATAACAATCTCATCAGATGTCCGCTCAGG
AGAAACCAAAGTCAACAAGCTATTCACACCAACCGACTATGTCGCTAAAA
CACTTAACGAAGCTGAATCAAACGTTTCAAAAGGACGGAAGAGAAAATCT
ACATCAAATGTCGAGTGCGACGATAGCGATGATAAAGACTTTGAGCAGCT
CTTCAAACGTCTACGCATctgaacataaaaaataatttctatttttcttg
cAAATATAACACCTTTAAACGCAAAA Coding sequence (CDS) from alignment at sc0001452:37155..37930 >TCONS_00036380 ID=TCONS_00036380|Name=TCONS_00036380|organism=Clytia hemisphaerica|type=CDS|length=687bp|location=Sequence derived from alignment at sc0001452:37155..37930 (Clytia hemisphaerica)
atgtgtattttgagTAAAATAAAAGTCTTCGGTGAAAACTCGAACGTTTC
AAGTAAATCTTTGTTCAAGATTGCTTCTGAGACAAAGGTCGATATCACTC
GTGTAAAAGTTTTCACCGCAAAACGCAAATCAGTCGTCGATttgcattca
aaaattgaatccCGAGATGAATTTCATCAAATCGGAAAATCCAAGAATCC
TCGTGCAATGGCATTTGCATTGGAGAATTCAAACATAAAGAAGTTGAACA
CTGGACGTTCTCAAATCAATTCGAAGAAGTACCATCGTGTTCTGAAAGCT
TCATACAAGAACGCTGTCTTCAAATCTCAACCTTTCACTGAGGCTCGTGT
TGTTATCAAAGCAAAACGCCGAGACGCGAATGATCTCATTCAACAACGTC
CACTTCCTTGTGTCGAAATGGGTGAATCAACAGTCTACAAAAGTACAGAT
GACTTCACTGAATTAGCTGACCAGTTCACCAATAAAATAACAATCTCATC
AGATGTCCGCTCAGGAGAAACCAAAGTCAACAAGCTATTCACACCAACCG
ACTATGTCGCTAAAACACTTAACGAAGCTGAATCAAACGTTTCAAAAGGA
CGGAAGAGAAAATCTACATCAAATGTCGAGTGCGACGATAGCGATGATAA
AGACTTTGAGCAGCTCTTCAAACGTCTACGCATctga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036380-exon-sc0001452-1491911889:37155..37930 | TCONS_00036380-exon-sc0001452-1491911889:37155..37930 | Clytia hemisphaerica | exon |
| TCONS_00036380-exon-sc0001452-1510915933:37155..37930 | TCONS_00036380-exon-sc0001452-1510915933:37155..37930 | Clytia hemisphaerica | exon |
| TCONS_00036380-exon-sc0001452-1575043694:37155..37930 | TCONS_00036380-exon-sc0001452-1575043694:37155..37930 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001452 | supercontig | sc0001452:37155..37930 . |
Blast
The following BLAST results are available for this feature:
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