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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036372 ID=TCONS_00036372|Name=TCONS_00036372|organism=Clytia hemisphaerica|type=transcript|length=1699bpRun BLAST on NCBI protein sequence of TCONS_00036372-protein >TCONS_00036372-protein ID=TCONS_00036372-protein|Name=TCONS_00036372-protein|organism=Clytia hemisphaerica|type=polypeptide|length=486bp MEDFPVHGLLPKRETQIESFLRKYPEYNGDGVLIAIFDSGIDPGAPGLERRun BLAST on NCBI transcript from alignment at sc0001451:39208..55709+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00036372 ID=TCONS_00036372|Name=TCONS_00036372|organism=Clytia hemisphaerica|type=transcript|length=16502bp|location=Sequence derived from alignment at sc0001451:39208..55709+ (Clytia hemisphaerica) Coding sequence (CDS) from alignment at sc0001451:39208..55709+ >TCONS_00036372 ID=TCONS_00036372|Name=TCONS_00036372|organism=Clytia hemisphaerica|type=CDS|length=20454bp|location=Sequence derived from alignment at sc0001451:39208..55709+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Annotated Terms
The following terms have been associated with this transcript:
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Blast
BLAST of TCONS_00036372 vs. Swiss-Prot (Human)
Match: TPP2 (Tripeptidyl-peptidase 2 OS=Homo sapiens GN=TPP2 PE=1 SV=4) HSP 1 Score: 555.058 bits (1429), Expect = 0.000e+0 Identity = 265/479 (55.32%), Postives = 352/479 (73.49%), Query Frame = 2
Query: 176 TMEDFPVHGLLPKRETQIESFLRKYPEYNGDGVLIAIFDSGIDPGAPGLERTPKGERKIVDIIDCSGSGDVDTSTVVKVDAEDNTITGITGRKLTVPSSWNNPSGDFYVGCKRLYSLFPTTPRRRVKKEFKEDEWDPAQQLALSKASANLLEEETKQGSTTKTEDQKLQLDDLKSTVECLKKFNEKYDDCGPVYDCVVFHNGEEWKACVDTTQTGKLENCQLMSSFHVNGEFGRFSDKDMVNYGLTVLDDGKRLSIVTNSSSHGTHVASISSAYFEDKPELNGVAPGAKIISMQIGDNRVDGMETGTALIRALKCAVDRKVDVINLSYGESSKWANSGRVIEMMNKIVAEHNIIFMSSAGNNGPALSTVGAPGGTSEFVIGVGAYVSPDMMAAEYSMPEKLPGNQYTWSSTGPSVDGALGVCITAPGGAITSVPNWTLSKSQLMNGTSMSSPNATGGVAVLLSALNKEGIP---HSPRR 1603
T E FP HGLLPK+ET SFL +YPEY+G GVLIA+ D+G+DPGAPG++ T G+ KIVDIID +GSGDV+T+T +V+ +D I G++GR L +P+SW NPSG +++G K Y +P + R++KE KE WDP ++AL++A +EE + ++ KL ++L+S VE L F +KY D GPVYDC+V+H+GE W+AC+D+ + G L ++ ++ E+G F +M+NY + + DDG LSIVT+ +HGTHVASI++ +F ++PE NGVAPGA+I+S++IGD R+ METGT LIRA+ ++ K D++N SYGE++ W NSGR+ E++N+ V +HNII++SSAGNNGP LSTVG PGGT+ VIGVGAYVSPDMM AEYS+ EKLP NQYTWSS GPS DGALGV I+APGGAI SVPNWTL +QLMNGTSMSSPNA GG+A++LS L I HS RR
Sbjct: 6 TEEPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDGKPKIVDIIDTTGSGDVNTAT--EVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDFYPKALKERIQKERKEKIWDPVHRVALAEACRK--QEEFDVANNGSSQANKLIKEELQSQVELLNSFEKKYSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSKSTVLRNYKEAQEYGSFGTAEMLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTRLSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVWKHNIIYVSSAGNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGALGVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALILSGLKANNIDYTVHSVRR 480 The following BLAST results are available for this feature:
BLAST of TCONS_00036372 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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