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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036339 ID=TCONS_00036339|Name=TCONS_00036339|organism=Clytia hemisphaerica|type=transcript|length=162bp
CCTAAATATGCTACCAAGCAGCTGGCTTTGGAGAATGCTCCCATGGAACC
CACTTGGCCTGCTTATGATATAGCAGAAATTAAGAAATATCATGacgaCT
ACAATTATCTATCAAAATGTTGCTATTCTACGACAGAAGATGACAGTCCT
ATCAAAAAAAGC Run BLAST on NCBI transcript from alignment at sc0001447:17137..19253+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036339 ID=TCONS_00036339|Name=TCONS_00036339|organism=Clytia hemisphaerica|type=transcript|length=2117bp|location=Sequence derived from alignment at sc0001447:17137..19253+ (Clytia hemisphaerica)
CCTAAATATGCTACCAAGCAGCTGGCTTTGGAGAATGCTCCCATGGAACC
CACTTGGCCTGCTTATGATATAGCAGAAATTAAGAAATATCATGGTATgg
attaaattttttatcattgtCTATGAAAGACACTAATCCAATTATAACTT
ATAGAACTTTTGTATGAGACCTTGAATATGACTTCTAGTTTGTGATACTT
AAACAGGTTAACTTCTTTTTTCGCAAAATGTTAGCCAAGCTATGAGGACG
CTAAACTAAAGCTTAGGAAATTTCAACCTATCTTCAAcataatttcaaac
aaaaatctgcATCATTCTTCAAGATATGCTGGAAGAAAGGCTCGAAAATC
ACGTTAAATCTAATGACGAACTAAAAGAAGTATTTTCAAACATACTGGAT
GAAAAGCTCAAAGATTTCCAGGATTCCATCGATGGGAAACTCAAACTTGT
TGAGTCAAAAATATGATGACAAAATTAAAACTCTAGACAGAATTACTCTG
CTGGAGAACAATCAACATAATCAGATTGAGGCTGCTGACAAAAACGAGAC
ATCAAACAACAACCACAACAATGAAATTCAACAACAAATTGAGAAACTGC
AAGTTGATCTCGCTGAACAGACTGATCGTAATCTTAGATccacaattatt
tttaaaaacattccaTATGACCCTAAAAACGAAACTTCTTCCGACATCAC
CATTGACAGTCTCGCCAAATTTATTGCCAACAAATCAACCATCGGTGAGG
AATTCTTTAAGGAGCAGTTGAAAGAGGACACCGTAATTTCGAGCGAAACC
GacaaatcaacaacaacaattgATCAAATGCTCCTTCCATAAGTGTCAAA
TTTCTGTTGTGGAGAGACTCTAATAGTATTTTGGACACATNAAGGAGCAG
TTGAAAGAGGACACCGTAATTTCAAGCGAAACCGacaaatcaacaacaac
aatcgATCAAATGCTCCTTCCATAAGTGTCAAATTTCTGTCGTGGAGAGA
CTCAAATAGTATTTTGGACACAATAATAAAGCATAACAAGGTTAACAGAG
GTTCCTTCATTTCCGTTAGTCAACAGTTTTCCAAGTCCACCACAATTCGA
CGTAACAAAGCCCTGGCCCATCGAAAATCACTCCTTCAAACTCACAAAGA
TATGGAATATAGACTCAATTACCCTGCTACCCTACTTGGTAGGAAAAAGA
ACTCTAATGAGAATTTTTCTCTTGTTCAATCATTTTAGATATTTGCTAGG
ATAGTTGGGTCCCTTTCCTAACCCTTGCCATAGTACTATTCCACTATCAT
ATGGTTGAAATTTCCTTAACATTCTGTTTCATACCCTTCACTTTTGACTC
CCATTTCacggttttttatttttatttaaggtCCTTTGTCCGTCCAACGA
AGCATTTTATTTATAActtctatatttttattttttaatctactgttttt
tgttttttctttttgtctattttttttaattaccatctttatcttttttt
tctctctctctctctctccttCTCCTCCCTCTCTCTGCCATGGTTGCCTT
CCCTATCTTGACTTATTTCtactattattattgttataatTACTCTCGTA
CTGCTTATTATTATATCACTCTTGAAACAGGCTTCGGACACCTGGACCTC
AATTGAATAACACCTGCGTCTTATTTCCAAGGTCCCCTGGGCATTCTAGT
ATTTAGTTACTATTTCTTGGGCTCACCTTCCGTATTAAACCCAAAGTTCT
TGTCCAATCATAAAATAAGACCTCTTCTGTTTGCTTTTAATTACTCAAAG
TAAACGCATTAGTATAccaaaaaattagaaacattatatcttttttttcc
tataaaaaaggaTTTTATTCATAGTCTTCATTAAACTGTGTAACattcat
aaaaagaaaaatatttatatatatCAGTGTTTTTATCTGTTTATAATTAG
AGAATGTGAATATTGCTTAGGAGTCTTAAACCCTGGTAAAtatatatcta
tctatctatcttagGTTAACTTCTAAAATatggtttaattttttttcaga
cgaCTACAATTATCTATCAAAATGTTGCTATTCTACGACAGAAGATGACA
GTCCTATCAAAAAAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036339-exon-sc0001447-1491911889:17137..17230 | TCONS_00036339-exon-sc0001447-1491911889:17137..17230 | Clytia hemisphaerica | exon |
| TCONS_00036339-exon-sc0001447-1510915933:17137..17230 | TCONS_00036339-exon-sc0001447-1510915933:17137..17230 | Clytia hemisphaerica | exon |
| TCONS_00036339-exon-sc0001447-1575043694:17137..17230 | TCONS_00036339-exon-sc0001447-1575043694:17137..17230 | Clytia hemisphaerica | exon |
| TCONS_00036339-exon-sc0001447-1491911889:19186..19253 | TCONS_00036339-exon-sc0001447-1491911889:19186..19253 | Clytia hemisphaerica | exon |
| TCONS_00036339-exon-sc0001447-1510915933:19186..19253 | TCONS_00036339-exon-sc0001447-1510915933:19186..19253 | Clytia hemisphaerica | exon |
| TCONS_00036339-exon-sc0001447-1575043694:19186..19253 | TCONS_00036339-exon-sc0001447-1575043694:19186..19253 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001447 | supercontig | sc0001447:17137..19253 + |
Blast
The following BLAST results are available for this feature:
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