TCONS_00036298 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036298
Unique NameTCONS_00036298
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3107

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036298 ID=TCONS_00036298|Name=TCONS_00036298|organism=Clytia hemisphaerica|type=transcript|length=3107bp
ACCAAATTCGGTGGTCCCACCGGACatagtacggtggtgctttccCTTTC
GCGATCGCATTCCCACCGTACTATTGTACGATGGGAAATTTAATGTATGG
TGGGAAAATGTATGGTGTTTTCAAGAGTTAACCTTTCATTCCCACCGGAC
ATTTAAATCAAGCCCCGCCGTACAACACCGCACcatgtacggcggtgtcc
agaGTCGTTAACAAATTAACTATCGATATATATATTCGCATATCTAAATT
GCCACCAAAAGATATCTCCATACTTCAATGTCAAACATAAAAGCCAAAAA
TGTGTCACCAGAATGGATAAAACAGATAAAAACACATTTTCTTCACAAAT
ATTTTGACACTTATATATGTCTTTATCAAGTGTGTAATGTACAAGATACT
TCAATGGATGTGAGTACAGTAAAAAACCAGCAGGAAATTAGATAGTAGCT
ATAAATAAGTTGTTTCAAATTGACACGCTAGCAATATGCCTGTGTTCCAT
GTGGATCGGATACAAAAGTCAGGCAAAATGACTGGGGACATGATGAGACA
CCCCTTTGCGCTTGCCTAGCTGTTCGTTTTTCTCTTGTGATATGAGATAT
TGTAGATGTAGCCAATGTTTATTCTCTATACTTCTTTGATTTTGTTACTT
TCCCATGCTCATACATAAAACCATTAAAACAAGGACAAATAGGGGTACAT
ACATCCAAGTTTTCATCCTCTGGTCTGgtttaaaactttgtttttggTGG
GGATAATGGTTCTGACGTTATGGTTGTTATCGCCCACGCCGATAAAAAGT
GCAGGTCCACAAGAGCTTGTTGTCACTTCGTTTTCTCTTTAAAGCTAGCT
GAGACCAACTTTTACACGACTCAGCAGGCGGTAGATACCAGCCAACAAGT
GAAATGATGGGACCAAAGTGAACAGTGAAGTGAAAGAAGTCTCTAGCTGT
CTAGAGGTGACCCGTGTTCCATTATTCCGTAGCTCGCGGCTACCATATTT
GTTATTGTTTAGCCCGATGTTGAAAAAGCAGTCAGCCTGTGCGCTGATGC
GCGTATTGCAGTTTTAGTGGCGCGCAAAATTATAACAAAGGGAAGGAGTT
TACAGAATCTAGATCTAGGCTCATCATAGATTGAAACTCAACTTGAAAGA
AGATTCAAAGATGGAACTACCAGAAGCCAAAGATAAGTTTATTTTGCATT
TACAAACCATATCCCTTTTTAGCAAGTATCCCCAGCCCAGCCCATGATGG
ACCACAAACAAACTCTCCCTTCTTCTTAAGAATGATCACTGACTGTGCTC
ACTTATCCAAACCTATAGTGAAAATATTGCTTCTAGAACCTTCCAAACTC
TTGTGCAATAACATTTTGAAACAATGATTGAATGATTGAAGAAATAAAGA
ATaacaatgaaaaatagaaaagttagAAAGCAGAAATTTAACCCCAGGGC
CTTTTAAACTCATTTAAACAATACTTTCATGGGTAAAACAATGTAAAGCA
CTCAACTGAAAACAAAATGATCATTGTGTTAACAAAATCCAGCATGGGAA
TTTCCCTATAAAACACCAAAAACATGATTACAGAGTCCTTTTAACTTCTG
CTCATCATCTGAAGATCCATCAACAGTTTAATCTTTTTGTTGGAAACTTA
TCTACCgtttttaaaagatcttttaaCTTTACATTGTTTTTTCCTCATAC
AACCACTAATAATTCAGTAAGTCTAAATCCTTTTTCACCATGGTTTGTCA
TGGGTATCATGATAAATTATCttctaaagttttttaaatttaatttcttt
ttgtggCCTTTCTGTGGTACCTTTTTCCTTTTCATGGTATATTTTTCGTC
AAACtgtttaataaatttttttgctttaacCCTCTGAAGATCTTTTTCTA
ACtgactgaaaatttcaaaagtctTTTCTATTGTGACAAAAAAAATAAGT
GTCAAAACCTTGGACAAGCTTcacattttgattttataatttatgGATGG
GTTGTTTTGTAAGGGTCTGTATTTTTATTCTTCTAGCTTTCTTCAATAAA
TCATCATGCCAAGAGCTGCCAAAAGACCGTTAGTTTTGAATGCAACCTCT
ACTCCCAACGGAGTTAAAGTCTTACTCCCTAGAGGTCAAAATCAGGAAAC
TTCACCAAATATGAGAAACAACAATATTGACGATACCTTACCCATTTTGG
ACGACTCAACCTCAAGAGACGACTCACAAATTACGCAAAGGGAACTTGAT
CAAGTCAAAGATGCACTCAATGCGAAAATCATAAAACAACAAAAGGATAT
GGAAACACTGGAGCGAAAATATGAAGATTTAAAGGTGCTTGTTATGGAAA
TTTATGCACGGGAAGAacaaaataaagtaaaagagaAAGATCGAAAACTG
CCACCAGCTCTTTCAACTCACGTACATTTGGCTTACGATGGTTTAAGCGT
TGACACGATATGGAACTTCAATGAAAGTTACCGTTCCAAACACAACAAAG
AAATTAAGATGAAAGTTTACAATTCCCTTCGGACATCTAAAGTGGATTAT
GAAGAGAAGTTAACTTTCAGAGCTATCTATCGCTATTTCGAAAATCTGAA
GAGGCAAGAAAAGGAAGGACCAGACACAAAAACAACCAAGAGGAGAACTA
CTAGGAGGCACAGGCTTTTCCTTGCACGTGACAAAGTGGAAAAGGAGGGT
GATGATGCTGAACTCTGGCAGCACGCGTGTGCGAATGTGATGTCCGATGA
AGAGACGGATGACGAAGGACCAACGACAACGCATGTtttccgtcgtcatg
attggaGGACAGATGCATTCAACGATTTGATTGATCGGATCGATGCTAGC
GTTCTGCAGATAAGTCGAAATTATGGAACCCCCTCGACCAGGAAGTTTCA
AATAGCCAAACTTCCAGCAGCTTTGGTCCGATAACTTTTCATGGTTTAAA
TTTatcttgttttattttgttttcatcttTTTCGTATCTTTTTCAACTAA
ATAAGGCTTAATTCTGCAATTCAGAAAATTGTTCAGTGTAATGCACTAAA
CTGTTAAGATAAGACACAATAAAGACACAATAAGACACAGAAAAGCCTCG
ATGCCTA
Run BLAST on NCBI

protein sequence of TCONS_00036298-protein

>TCONS_00036298-protein ID=TCONS_00036298-protein|Name=TCONS_00036298-protein|organism=Clytia hemisphaerica|type=polypeptide|length=292bp
MPRAAKRPLVLNATSTPNGVKVLLPRGQNQETSPNMRNNNIDDTLPILDD
STSRDDSQITQRELDQVKDALNAKIIKQQKDMETLERKYEDLKVLVMEIY
AREEQNKVKEKDRKLPPALSTHVHLAYDGLSVDTIWNFNESYRSKHNKEI
KMKVYNSLRTSKVDYEEKLTFRAIYRYFENLKRQEKEGPDTKTTKRRTTR
RHRLFLARDKVEKEGDDAELWQHACANVMSDEETDDEGPTTTHVFRRHDW
RTDAFNDLIDRIDASVLQISRNYGTPSTRKFQIAKLPAALVR
Run BLAST on NCBI

transcript from alignment at sc0001437:21379..28972+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036298 ID=TCONS_00036298|Name=TCONS_00036298|organism=Clytia hemisphaerica|type=transcript|length=7594bp|location=Sequence derived from alignment at sc0001437:21379..28972+ (Clytia hemisphaerica)
ACCAAATTCGGTGGTCCCACCGGACatagtacggtggtgctttccCTTTC GCGATCGCATTCCCACCGTACTATTGTACGATGGGAAATTTAATGTATGG TGGGAAAATGTATGGTGTTTTCAAGAGTTAACCTTTCATTCCCACCGGAC ATTTAAATCAAGCCCCGCCGTACAACACCGCACcatgtacggcggtgtcc agaGTCGTTAACAAATTAACTATCGATATATATATTCGCATATCTAAATT GCCACCAAAAGATATCTCCATACTTCAATGTCAAACATAAAAGCCAAAAA TGTGTCACCAGAATGGATAAAACAGATAAAAACACATTTTCTTCACAAAT ATTTTGACACTTATATATGTCTTTATCAAGTGTGTAATGTACAAGATACT TCAATGGATGTGAGTACAGTAAAAAACCAGCAGGAAATTAGATAGTAGCT ATAAATAAGTTGTTTCAAATTGACACGCTAGCAATATGCCTGTGTTCCAT GTGGATCGGATACAAAAGTCAGGCAAAATGACTGGGGACATGATGAGACA CCCCTTTGCGCTTGCCTAGCTGTTCGTTTTTCTCTTGTGATATGAGATAT TGTAGATGTAGCCAATGTTTATTCTCTATACTTCTTTGATTTTGTTACTT TCCCATGCTCATACATAAAACCATTAAAACAAGGACAAATAGGGGTACAT ACATCCAAGTTTTCATCCTCTGGTCTGgtttaaaactttgtttttggTGG GGATAATGGTTCTGACGTTATGGTTGTTATCGCCCACGCCGATAAAAAGT GCAGGTCCACAAGAGCTTGTTGTCACTTCGTTTTCTCTTTAAAGCTAGCT GAGACCAACTTTTACACGACTCAGCAGGCGGTAGATACCAGCCAACAAGT GAAATGATGGGACCAAAGTGAACAGTGAAGTGAAAGAAGTCTCTAGCTGT CTAGAGGTGACCCGTGTTCCATTATTCCGTAGCTCGCGGCTACCATATTT GTTATTGTTTAGCCCGATGTTGAAAAAGCAGTCAGCCTGTGCGCTGATGC GCGTATTGCAGTTTTAGTGGCGCGCAAAATTATAACAAAGGGAAGGAGTT TACAGAATCTAGATCTAGGCTCATCATAGATTGAAACTCAACTTGAAAGA AGATTCAAAGATGGAACTACCAGAAGCCAAAGATAAGTTTATTTTGCATT TACAAACCATATCCCTTTTTAGCAAGTATCCCCAGCCCAGCCCATGATGG ACCACAAACAAACTCTCCCTTCTTCTTAAGAATGATCACTGACTGTGCTC ACTTATCCAAACCTATAGTGAAAATATTGCTTCTAGAACCTTCCAAACTC TTGTGCAATAACATTTTGAAACAATGATTGAATGATTGAAGAAATAAAGA ATaacaatgaaaaatagaaaagttagAAAGCAGAAATTTAACCCCAGGGC CTTTTAAACTCATTTAAACAATACTTTCATGGGTAAAACAATGTAAAGCA CTCAACTGAAAACAAAATGATCATTGTGTTAACAAAATCCAGCATGGGAA TTTCCCTATAAAACACCAAAAACATGATTACAGAGTCCTTTTAACTTCTG CTCATCATCTGAAGATCCATCAACAGTTTAATCTTTTTGTTGGAAACTTA TCTACCgtttttaaaagatcttttaaCTTTACATTGTTTTTTCCTCATAC AACCACTAATAATTCAGTAAGTCTAAATCCTTTTTCACCATGGTTTGTCA TGGGTATCATGATAAATTATCttctaaagttttttaaatttaatttcttt ttgtggCCTTTCTGTGGTACCTTTTTCCTTTTCATGGTATATTTTTCGTC AAACtgtttaataaatttttttgctttaacCCTCTGAAGATCTTTTTCTA ACtgactgaaaatttcaaaagtctTTTCTATTGTGACAAAAAAAATAAGT GTCAAAACCTTGGACAAGCTTcacattttgattttataatttatgGATGG GTTGTTTTGTAAGGGTCTGTATTTTTATTCTTCTAGCTTTCTTCAATAAA TCATCATGCCAAGAGCTGCCAAAAGACCGTTAGTTTTGAATGCAACCTCT ACTCCCAACGGAGTTAAAGTCTTACTCCCTAGAGGTCAAAATCAGGAAAC TTCACCAAATATGAGgtaacattttaaggtttttttggGGACCTCGAGTT ATCTTTAAACGATTAGTTTTCCCTCAGAAtgattctttgttaaaaattgt TGGGCCAGTTGAATTCTGCTATCACAGACCAATGTTACCGGCTGTTTTCT GGGCATAAGTTTTACATGCTTTTAAGCCCTCAACTTGTCCTTTCCCACAT GGTTAATTTCTGGCTAGCATTTATTAATATTGGAAAACACTAGAAAAAGT ACTGAATTACTgaaattcattattttaaaattcaagGCCCTCCTGTTATG TTAGGGATCTGAGAGCAAAATCAAAACCATTTTTACCAAAGTCAATAATA TATTCCATAGAGTAGCTGGTGAATCTTGTCACAGAATGTCACAAACTCTC TTCTTTTTCAGAAACAACAATATTGACGATACCTTACCCATTTTGGACGA CTCAACCTCAAGAGACGACTCACAAATTACGCAAAGgtatgcttttttaa acaataattGCTTTACACTTATGTTTTGTCATAGTAAATTGATTACCTTT GCATCAATAAACTATTTCCTTATTGTGAATGTTTGGTTTTGTGGCTTACG AGTGCAAAATGATTTTAACCATTTCAAAGACTTTCTTGACAACATTTTCT TTGTATaaacaatattcaaaatttATCCTGTTAAAGTGGAAACAATTCTG TAAAACAACACAAGATTAAAATGTCCTTTAGAATTTAAACATTGTATCAT CTGGCATATGTGTAGTCATCTAGCATGCCAAACACATATCAGCATTAGCC ATTCAAAAGTGTCCAAATGTGGATGGTACATTGTTTAAAACTAAAAGACA AGTTTTGATTACAATGCTAAAAAACCAtgcaaaatttgaccaaatagTTA GATTGGGTGTGCATGTTGTTAGTCATTAAAAATGCCAAAATAACATCATC AGTCAAAACATTCTAAACCATGTTTAAACTGTACAAATCATGATTTAGCT TGACGctcattttttgcattttttttgtcatttttttcaaagctttaaaa attctttttacagAAAAGCAAAAACGGCTAAGCGATCCATTAACAGGAGA AAACACTATCGACAAGATATGAAAAGAAAGATTAAGCAGAGAAAAGGGAA AGCAAAAGAGCAAATGAAACACAATTTAATCAATGCCAAAAAGGAGTTAA AGAAGTTAAAGAACGAATTAATTACACAGAGTTCAAAAAGAAAACCAATT AACCGAAGAGTAGTCCAGAAACTTGCATTTACCATGCCTGCAAAAACCAA ATATTctcaaatgaagaaaaattgtcGAAATGAGCTTTTGTCCTCCTTAT CGTCCACAATCCCAGCTTTCACCAAGGACAAAATCTCTCTTTACAGCAAT GGGTATCCTAAATGGTCTGGTGTTTTTGGAGAAGTTGTATTATGCAAGAT AAACTTTCTTGGCATTACATGTgccaagaaaaatatcaaaggaACCATGG CAGACTTGAGAGCTGAAGCTTTGGTTCTTCAACACCTTTCCGGTTCTAGT TTTGTGCCATATTTATTTGGTATACTTGATTCTGGTTCAATTTTAATGGA ATTCGTATCAGGCTCAAAAACCAGCATTACAACTGCTCAAACACTAAGAT CTGTTCttggaaaaagtaaaattaagaaATCACAGTGGTTCAAAGTTTGC AGGGAGTTAGTTGAAGGCCTTACTTATATTCATGAGAAGAATATTCTTCA CAATGACTTGCATGGAGAGAATATTCTTTTAAGGCCTTCCCTTTCTCCAT GCATAATTGATTTTGGTAAAGCCACTCTCATCAATGCGCCAATGATGTAT GATATTGCACCTGGCTCTAAAGAGCAAGATATTTATAATAAGAGGCATCA GCATCTTGCCTTTGAACTTCGAAATATTCAAAAGACAAAACAATCTGAGG CCACAGATGTATACTCGTTGGGGTATAATTttagaaacattggaaaattt gAATCAATAAAAGAGTTGGCTTCCCTAGGTTTGAAGATGTTGACAGAGGA CCCCGCAAGTAGATACATCTTGATTGACTGTTCGGTGAACTTACTTAAGT TTGACCAAATCAATTGAACTTCTGACTTAAATACAGTGGTAGTGGTTTTG ATACTTTTTAGACaatattttcttactttttataagaatatcatatTTTA ACTTTAGAGTTCTGTTTtcttaaaagacattttttcctcttttcaataAT CTTTGTACTCTCTATtattattttgacaattttttccaTCCCTTTTTGGA AGTTATGAATTATTTTAACTTTAACAAGACATTTAAGAagcaacaaaatt tttgaacaaagagaaatttatgaaaaattttaatttatctaccttaaggg aactaattttcccgGTAACtaattttttgcgaaaattagttccctttaaG GTAAATCTTCCTTTTATCGTACCAATTGCTTGGTTACGATGTAATAcaca ctttttcttttataagaataacttctatcagaatatcagggtgagttAGT GTTAAACCAAACTGTAGGCCTAtcgtttagaacaatagaaaaataaaaaa aatgttcacCCTTAACCAAAATActcaattcttataaaaaaacgtgtatc aataATCAATTTTAGCAAAACAAGGCTCTCAATTTTTTATACATCTTAAA AACGGTGGTTTTTATAGGAGACAATTATCTCAGGAGAGGCGTCTAGATGG GTTAAGGTTACAGGAAACCAAAAAATGATCTTTGCTTGTATTTTTATTCT ACATTCAATTTAGGGAACTTGATCAAGTCAAAGATGCACTCAATGCGAAA ATCATAAAACAACAAAAGGATATGGAAACACTGGAGCGAAAATATGAAGA TTTAAAGGTGCTTGTTATGGAAATTTATGCACGGGAAGAacaaaataaag taaaagagaAAGATCGAAAACTGCCACCAGCTCTTTCAGTAAGTTTCCTT TTTTAATAGTATAGATTTATCCATCCTTGATAAGTTATCATTTTTGATGC ATTTATCTTTTGGTAGTTCAAGAGATAGTAGTTTGAAATGGTACATTTCA tataatttgattttataaCATAGATTCTACCCTTAGACTTCAGGGTCTGA gactttccaaaattttcgtgAGAGGGTATAAGCTATAAGCAAGGTTCAAC TGGGACAGCCAGTTAACAAttcaaattgtaatttttttgcctgcggcgtc ATTTTCCCCCTTTTCCATTGTAGAATTTTATTAATAAGCAAGTTCAACCT GAAAAATTGCTTGTACTTTATTTATAAAAGTACTTTAAGTCAGCAAATTT CGtaagggtcaattttttttcatttttgtaaggGGGTTGCCACTTAAAGG GGGTCTTCCTACTTaaggggggtcttgacccctctaaaCTAAGCCCCAAC TAAGCATAATATTTCATATAATTAACTGTCTGTAAAAAGTCAGTCTATAA TGTTTAATTGCCCCTATTTGTTTACAGACTCACGTACATTTGGCTTACGA TGGTTTAAGCGTTGACACGATATGGAACTTCAATGAAAGTTACCGTTCCA AACACAACAAAGAAATTAAGATGAAAGTTTACAATTCCCTTCGGACATCT AAAGTGGATTATGAAGAGAAGTTAACTTTCAGTAAGTACaacctaaaata tttttgaaagactgATTTTATTATTCATCTTTCTCGTTTTCTATTCCTTG CAAGAGGTTAAATTAGACCATTCTTCTTATAAAGACTCCTTAAAGTATAA TAttaaaataaattcaacaaGGGGTTACGTGTTTGCCGGAACTTAACTGC TAGGAAAGTATTATTCTTTTCTCTAGGGTGTTGATGTTGTCTCGGCAAAT ATGGAAATACAAATTTATTAGTTTATTTGTCGATTTAATTTTAAATGTGT TTTTGTCTTGTTTAGGAGCTATCTATCGCTATTTCGAAAATCTGAAGAGG CAAGAAAAGGAAGGACCAGACACAAAAACAACCAAGAGGAGAACTACTAG GAGGCACAGGGTAAGAATGAAAGTTTTTATCATTTcagatcattttcaaa tttatgtcAAGTTACAGCAAAACACTCgatgcagggggggggggcaNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACtgcttcccccccccccct gctcgATGTAAGCTTAATTTGAAAGTAGTAATAAGAAAATAATGATCTTC ACTGAAGTTTTCCCAAAGAAATTGTAATATTACACTCACGAACATGTTTT CAATAAACTCAAAATCGCATTATGACTCATTTCTATCAAAAGTAACATCC AGCTTGTTATCAGCTAGTAAATCTGTACTGATCATTTGTTTCTTCGTTTA GCTTTTCCTTGCACGTGACAAAGTGGAAAAGGAGGGTGATGATGCTGAAC TCTGGCAGCACGCGTGTGCGAATGTGATGTCCGATGAAGAGACGGATGAC GAAGGACCAACGACAACGCATGTtttccgtcgtcatgattggaGGACAGA TGCATTCAACGATTTGATTGATCGGATCGATGCTAGCGTTCTGCAGATAA GTCGAAATTATGGAACCCCCTCGACCAGGAAGTTTCAAATAGCCAAACTT CCAGCAGCTTTGGTCCGATAACTTTTCATGGTTTAAATTTatcttgtttt attttgttttcatcttTTTCGTATCTTTTTCAACTAAATAAGGCTTAATT CTGCAATTCAGAAAATTGTTCAGTGTAATGCACTAAACTGTTAAGATAAG ACACAATAAAGACACAATAAGACACAGAAAAGCCTCGATGCCTA

Coding sequence (CDS) from alignment at sc0001437:21379..28972+

>TCONS_00036298 ID=TCONS_00036298|Name=TCONS_00036298|organism=Clytia hemisphaerica|type=CDS|length=5274bp|location=Sequence derived from alignment at sc0001437:21379..28972+ (Clytia hemisphaerica)
ATGCCAAGAGCTGCCAAAAGACCGTTAGTTTTGAATGCAACCTCTACTCC
CAACGGAGTTAAAGTCTTACTCCCTAGAGGTCAAAATCAGGAAACTTCAC
CAAATATGAGAAACAACAATATTGACGATACCTTACCCATTTTGGACGAC
TCAACCTCAAGAGACGACTCACAAATTACGCAAAGGGAACTTGATCAAGT
CAAAGATGCACTCAATGCGAAAATCATAAAACAACAAAAGGATATGGAAA
CACTGGAGCGAAAATATGAAGATTTAAAGGTGCTTGTTATGGAAATTTAT
GCACGGGAAGAacaaaataaagtaaaagagaAAGATCGAAAACTGCCACC
AGCTCTTTCAACTCACGTACATTTGGCTTACGATGGTTTAAGCGTTGACA
CGATATGGAACTTCAATGAAAGTTACCGTTCCAAACACAACAAAGAAATT
AAGATGAAAGTTTACAATTCCCTTCGGACATCTAAAGTGGATTATGAAGA
GAAGTTAACTTTCAGAGCTATCTATCGCTATTTCGAAAATCTGAAGAGGC
AAGAAAAGGAAGGACCAGACACAAAAACAACCAAGAGGAGAACTACTAGG
AGGCACAGGCTTTTCCTTGCACGTGACAAAGTGGAAAAGGAGGGTGATGA
TGCTGAACTCTGGCAGCACGCGTGTGCGAATGTGATGTCCGATGAAGAGA
CGGATGACGAAGGACCAACGACAACGCATGTtttccgtcgtcatgattgg
aGGACAGATGCATTCAACGATTTGATTGATCGGATCGATGCTAGCGTTCT
GCAGATAAGTCGAAATTATGGAACCCCCTCGACCAGGAAGTTTCAAATAG
CCAAACTTCCAGCAGCTTTGGTCCGATAAATGCCAAGAGCTGCCAAAAGA
CCGTTAGTTTTGAATGCAACCTCTACTCCCAACGGAGTTAAAGTCTTACT
CCCTAGAGGTCAAAATCAGGAAACTTCACCAAATATGAGAAACAACAATA
TTGACGATACCTTACCCATTTTGGACGACTCAACCTCAAGAGACGACTCA
CAAATTACGCAAAGGGAACTTGATCAAGTCAAAGATGCACTCAATGCGAA
AATCATAAAACAACAAAAGGATATGGAAACACTGGAGCGAAAATATGAAG
ATTTAAAGGTGCTTGTTATGGAAATTTATGCACGGGAAGAacaaaataaa
gtaaaagagaAAGATCGAAAACTGCCACCAGCTCTTTCAACTCACGTACA
TTTGGCTTACGATGGTTTAAGCGTTGACACGATATGGAACTTCAATGAAA
GTTACCGTTCCAAACACAACAAAGAAATTAAGATGAAAGTTTACAATTCC
CTTCGGACATCTAAAGTGGATTATGAAGAGAAGTTAACTTTCAGAGCTAT
CTATCGCTATTTCGAAAATCTGAAGAGGCAAGAAAAGGAAGGACCAGACA
CAAAAACAACCAAGAGGAGAACTACTAGGAGGCACAGGCTTTTCCTTGCA
CGTGACAAAGTGGAAAAGGAGGGTGATGATGCTGAACTCTGGCAGCACGC
GTGTGCGAATGTGATGTCCGATGAAGAGACGGATGACGAAGGACCAACGA
CAACGCATGTtttccgtcgtcatgattggaGGACAGATGCATTCAACGAT
TTGATTGATCGGATCGATGCTAGCGTTCTGCAGATAAGTCGAAATTATGG
AACCCCCTCGACCAGGAAGTTTCAAATAGCCAAACTTCCAGCAGCTTTGG
TCCGATAAATGCCAAGAGCTGCCAAAAGACCGTTAGTTTTGAATGCAACC
TCTACTCCCAACGGAGTTAAAGTCTTACTCCCTAGAGGTCAAAATCAGGA
AACTTCACCAAATATGAGAAACAACAATATTGACGATACCTTACCCATTT
TGGACGACTCAACCTCAAGAGACGACTCACAAATTACGCAAAGGGAACTT
GATCAAGTCAAAGATGCACTCAATGCGAAAATCATAAAACAACAAAAGGA
TATGGAAACACTGGAGCGAAAATATGAAGATTTAAAGGTGCTTGTTATGG
AAATTTATGCACGGGAAGAacaaaataaagtaaaagagaAAGATCGAAAA
CTGCCACCAGCTCTTTCAACTCACGTACATTTGGCTTACGATGGTTTAAG
CGTTGACACGATATGGAACTTCAATGAAAGTTACCGTTCCAAACACAACA
AAGAAATTAAGATGAAAGTTTACAATTCCCTTCGGACATCTAAAGTGGAT
TATGAAGAGAAGTTAACTTTCAGAGCTATCTATCGCTATTTCGAAAATCT
GAAGAGGCAAGAAAAGGAAGGACCAGACACAAAAACAACCAAGAGGAGAA
CTACTAGGAGGCACAGGCTTTTCCTTGCACGTGACAAAGTGGAAAAGGAG
GGTGATGATGCTGAACTCTGGCAGCACGCGTGTGCGAATGTGATGTCCGA
TGAAGAGACGGATGACGAAGGACCAACGACAACGCATGTtttccgtcgtc
atgattggaGGACAGATGCATTCAACGATTTGATTGATCGGATCGATGCT
AGCGTTCTGCAGATAAGTCGAAATTATGGAACCCCCTCGACCAGGAAGTT
TCAAATAGCCAAACTTCCAGCAGCTTTGGTCCGATAAATGCCAAGAGCTG
CCAAAAGACCGTTAGTTTTGAATGCAACCTCTACTCCCAACGGAGTTAAA
GTCTTACTCCCTAGAGGTCAAAATCAGGAAACTTCACCAAATATGAGAAA
CAACAATATTGACGATACCTTACCCATTTTGGACGACTCAACCTCAAGAG
ACGACTCACAAATTACGCAAAGGGAACTTGATCAAGTCAAAGATGCACTC
AATGCGAAAATCATAAAACAACAAAAGGATATGGAAACACTGGAGCGAAA
ATATGAAGATTTAAAGGTGCTTGTTATGGAAATTTATGCACGGGAAGAac
aaaataaagtaaaagagaAAGATCGAAAACTGCCACCAGCTCTTTCAACT
CACGTACATTTGGCTTACGATGGTTTAAGCGTTGACACGATATGGAACTT
CAATGAAAGTTACCGTTCCAAACACAACAAAGAAATTAAGATGAAAGTTT
ACAATTCCCTTCGGACATCTAAAGTGGATTATGAAGAGAAGTTAACTTTC
AGAGCTATCTATCGCTATTTCGAAAATCTGAAGAGGCAAGAAAAGGAAGG
ACCAGACACAAAAACAACCAAGAGGAGAACTACTAGGAGGCACAGGCTTT
TCCTTGCACGTGACAAAGTGGAAAAGGAGGGTGATGATGCTGAACTCTGG
CAGCACGCGTGTGCGAATGTGATGTCCGATGAAGAGACGGATGACGAAGG
ACCAACGACAACGCATGTtttccgtcgtcatgattggaGGACAGATGCAT
TCAACGATTTGATTGATCGGATCGATGCTAGCGTTCTGCAGATAAGTCGA
AATTATGGAACCCCCTCGACCAGGAAGTTTCAAATAGCCAAACTTCCAGC
AGCTTTGGTCCGATAAATGCCAAGAGCTGCCAAAAGACCGTTAGTTTTGA
ATGCAACCTCTACTCCCAACGGAGTTAAAGTCTTACTCCCTAGAGGTCAA
AATCAGGAAACTTCACCAAATATGAGAAACAACAATATTGACGATACCTT
ACCCATTTTGGACGACTCAACCTCAAGAGACGACTCACAAATTACGCAAA
GGGAACTTGATCAAGTCAAAGATGCACTCAATGCGAAAATCATAAAACAA
CAAAAGGATATGGAAACACTGGAGCGAAAATATGAAGATTTAAAGGTGCT
TGTTATGGAAATTTATGCACGGGAAGAacaaaataaagtaaaagagaAAG
ATCGAAAACTGCCACCAGCTCTTTCAACTCACGTACATTTGGCTTACGAT
GGTTTAAGCGTTGACACGATATGGAACTTCAATGAAAGTTACCGTTCCAA
ACACAACAAAGAAATTAAGATGAAAGTTTACAATTCCCTTCGGACATCTA
AAGTGGATTATGAAGAGAAGTTAACTTTCAGAGCTATCTATCGCTATTTC
GAAAATCTGAAGAGGCAAGAAAAGGAAGGACCAGACACAAAAACAACCAA
GAGGAGAACTACTAGGAGGCACAGGCTTTTCCTTGCACGTGACAAAGTGG
AAAAGGAGGGTGATGATGCTGAACTCTGGCAGCACGCGTGTGCGAATGTG
ATGTCCGATGAAGAGACGGATGACGAAGGACCAACGACAACGCATGTttt
ccgtcgtcatgattggaGGACAGATGCATTCAACGATTTGATTGATCGGA
TCGATGCTAGCGTTCTGCAGATAAGTCGAAATTATGGAACCCCCTCGACC
AGGAAGTTTCAAATAGCCAAACTTCCAGCAGCTTTGGTCCGATAAATGCC
AAGAGCTGCCAAAAGACCGTTAGTTTTGAATGCAACCTCTACTCCCAACG
GAGTTAAAGTCTTACTCCCTAGAGGTCAAAATCAGGAAACTTCACCAAAT
ATGAGAAACAACAATATTGACGATACCTTACCCATTTTGGACGACTCAAC
CTCAAGAGACGACTCACAAATTACGCAAAGGGAACTTGATCAAGTCAAAG
ATGCACTCAATGCGAAAATCATAAAACAACAAAAGGATATGGAAACACTG
GAGCGAAAATATGAAGATTTAAAGGTGCTTGTTATGGAAATTTATGCACG
GGAAGAacaaaataaagtaaaagagaAAGATCGAAAACTGCCACCAGCTC
TTTCAACTCACGTACATTTGGCTTACGATGGTTTAAGCGTTGACACGATA
TGGAACTTCAATGAAAGTTACCGTTCCAAACACAACAAAGAAATTAAGAT
GAAAGTTTACAATTCCCTTCGGACATCTAAAGTGGATTATGAAGAGAAGT
TAACTTTCAGAGCTATCTATCGCTATTTCGAAAATCTGAAGAGGCAAGAA
AAGGAAGGACCAGACACAAAAACAACCAAGAGGAGAACTACTAGGAGGCA
CAGGCTTTTCCTTGCACGTGACAAAGTGGAAAAGGAGGGTGATGATGCTG
AACTCTGGCAGCACGCGTGTGCGAATGTGATGTCCGATGAAGAGACGGAT
GACGAAGGACCAACGACAACGCATGTtttccgtcgtcatgattggaGGAC
AGATGCATTCAACGATTTGATTGATCGGATCGATGCTAGCGTTCTGCAGA
TAAGTCGAAATTATGGAACCCCCTCGACCAGGAAGTTTCAAATAGCCAAA
CTTCCAGCAGCTTTGGTCCGATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021358XLOC_021358Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036298-proteinTCONS_00036298-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036298-exon-sc0001437-1491911889:21379..23543TCONS_00036298-exon-sc0001437-1491911889:21379..23543Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1510915933:21379..23543TCONS_00036298-exon-sc0001437-1510915933:21379..23543Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1575043694:21379..23543TCONS_00036298-exon-sc0001437-1575043694:21379..23543Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1491911889:23940..24014TCONS_00036298-exon-sc0001437-1491911889:23940..24014Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1510915933:23940..24014TCONS_00036298-exon-sc0001437-1510915933:23940..24014Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1575043694:23940..24014TCONS_00036298-exon-sc0001437-1575043694:23940..24014Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1491911889:26342..26516TCONS_00036298-exon-sc0001437-1491911889:26342..26516Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1510915933:26342..26516TCONS_00036298-exon-sc0001437-1510915933:26342..26516Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1575043694:26342..26516TCONS_00036298-exon-sc0001437-1575043694:26342..26516Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1491911889:27056..27209TCONS_00036298-exon-sc0001437-1491911889:27056..27209Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1510915933:27056..27209TCONS_00036298-exon-sc0001437-1510915933:27056..27209Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1575043694:27056..27209TCONS_00036298-exon-sc0001437-1575043694:27056..27209Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1491911889:27494..27588TCONS_00036298-exon-sc0001437-1491911889:27494..27588Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1510915933:27494..27588TCONS_00036298-exon-sc0001437-1510915933:27494..27588Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1575043694:27494..27588TCONS_00036298-exon-sc0001437-1575043694:27494..27588Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1491911889:28530..28972TCONS_00036298-exon-sc0001437-1491911889:28530..28972Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1510915933:28530..28972TCONS_00036298-exon-sc0001437-1510915933:28530..28972Clytia hemisphaericaexon
TCONS_00036298-exon-sc0001437-1575043694:28530..28972TCONS_00036298-exon-sc0001437-1575043694:28530..28972Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001437supercontigsc0001437:21379..28972 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.159148 0.0358141 0.0693059 0.027122 0.0330184 0.0521832 0.0472176 0.0589394 0.0412649 0.0255566 0.0496117 0.081532 0.105844 0.0930095 0.542217 0.455061 1.22229 1.4883 0.299314 0.3813 1.53873 1.09117 0.308805 0.382839 0.722912 0.222881 0.0167864 0.0179149 0.081527 0.0553754
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR028101DUF4616
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036298 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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