XLOC_021358 (gene) - C. hemisphaerica

Overview
NameXLOC_021358
Unique NameXLOC_021358
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001437:21379..28972+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021358 ID=XLOC_021358|Name=XLOC_021358|organism=Clytia hemisphaerica|type=gene|length=7594bp|location=Sequence derived from alignment at sc0001437:21379..28972+ (Clytia hemisphaerica)
ACCAAATTCGGTGGTCCCACCGGACatagtacggtggtgctttccCTTTC GCGATCGCATTCCCACCGTACTATTGTACGATGGGAAATTTAATGTATGG TGGGAAAATGTATGGTGTTTTCAAGAGTTAACCTTTCATTCCCACCGGAC ATTTAAATCAAGCCCCGCCGTACAACACCGCACcatgtacggcggtgtcc agaGTCGTTAACAAATTAACTATCGATATATATATTCGCATATCTAAATT GCCACCAAAAGATATCTCCATACTTCAATGTCAAACATAAAAGCCAAAAA TGTGTCACCAGAATGGATAAAACAGATAAAAACACATTTTCTTCACAAAT ATTTTGACACTTATATATGTCTTTATCAAGTGTGTAATGTACAAGATACT TCAATGGATGTGAGTACAGTAAAAAACCAGCAGGAAATTAGATAGTAGCT ATAAATAAGTTGTTTCAAATTGACACGCTAGCAATATGCCTGTGTTCCAT GTGGATCGGATACAAAAGTCAGGCAAAATGACTGGGGACATGATGAGACA CCCCTTTGCGCTTGCCTAGCTGTTCGTTTTTCTCTTGTGATATGAGATAT TGTAGATGTAGCCAATGTTTATTCTCTATACTTCTTTGATTTTGTTACTT TCCCATGCTCATACATAAAACCATTAAAACAAGGACAAATAGGGGTACAT ACATCCAAGTTTTCATCCTCTGGTCTGgtttaaaactttgtttttggTGG GGATAATGGTTCTGACGTTATGGTTGTTATCGCCCACGCCGATAAAAAGT GCAGGTCCACAAGAGCTTGTTGTCACTTCGTTTTCTCTTTAAAGCTAGCT GAGACCAACTTTTACACGACTCAGCAGGCGGTAGATACCAGCCAACAAGT GAAATGATGGGACCAAAGTGAACAGTGAAGTGAAAGAAGTCTCTAGCTGT CTAGAGGTGACCCGTGTTCCATTATTCCGTAGCTCGCGGCTACCATATTT GTTATTGTTTAGCCCGATGTTGAAAAAGCAGTCAGCCTGTGCGCTGATGC GCGTATTGCAGTTTTAGTGGCGCGCAAAATTATAACAAAGGGAAGGAGTT TACAGAATCTAGATCTAGGCTCATCATAGATTGAAACTCAACTTGAAAGA AGATTCAAAGATGGAACTACCAGAAGCCAAAGATAAGTTTATTTTGCATT TACAAACCATATCCCTTTTTAGCAAGTATCCCCAGCCCAGCCCATGATGG ACCACAAACAAACTCTCCCTTCTTCTTAAGAATGATCACTGACTGTGCTC ACTTATCCAAACCTATAGTGAAAATATTGCTTCTAGAACCTTCCAAACTC TTGTGCAATAACATTTTGAAACAATGATTGAATGATTGAAGAAATAAAGA ATaacaatgaaaaatagaaaagttagAAAGCAGAAATTTAACCCCAGGGC CTTTTAAACTCATTTAAACAATACTTTCATGGGTAAAACAATGTAAAGCA CTCAACTGAAAACAAAATGATCATTGTGTTAACAAAATCCAGCATGGGAA TTTCCCTATAAAACACCAAAAACATGATTACAGAGTCCTTTTAACTTCTG CTCATCATCTGAAGATCCATCAACAGTTTAATCTTTTTGTTGGAAACTTA TCTACCgtttttaaaagatcttttaaCTTTACATTGTTTTTTCCTCATAC AACCACTAATAATTCAGTAAGTCTAAATCCTTTTTCACCATGGTTTGTCA TGGGTATCATGATAAATTATCttctaaagttttttaaatttaatttcttt ttgtggCCTTTCTGTGGTACCTTTTTCCTTTTCATGGTATATTTTTCGTC AAACtgtttaataaatttttttgctttaacCCTCTGAAGATCTTTTTCTA ACtgactgaaaatttcaaaagtctTTTCTATTGTGACAAAAAAAATAAGT GTCAAAACCTTGGACAAGCTTcacattttgattttataatttatgGATGG GTTGTTTTGTAAGGGTCTGTATTTTTATTCTTCTAGCTTTCTTCAATAAA TCATCATGCCAAGAGCTGCCAAAAGACCGTTAGTTTTGAATGCAACCTCT ACTCCCAACGGAGTTAAAGTCTTACTCCCTAGAGGTCAAAATCAGGAAAC TTCACCAAATATGAGgtaacattttaaggtttttttggGGACCTCGAGTT ATCTTTAAACGATTAGTTTTCCCTCAGAAtgattctttgttaaaaattgt TGGGCCAGTTGAATTCTGCTATCACAGACCAATGTTACCGGCTGTTTTCT GGGCATAAGTTTTACATGCTTTTAAGCCCTCAACTTGTCCTTTCCCACAT GGTTAATTTCTGGCTAGCATTTATTAATATTGGAAAACACTAGAAAAAGT ACTGAATTACTgaaattcattattttaaaattcaagGCCCTCCTGTTATG TTAGGGATCTGAGAGCAAAATCAAAACCATTTTTACCAAAGTCAATAATA TATTCCATAGAGTAGCTGGTGAATCTTGTCACAGAATGTCACAAACTCTC TTCTTTTTCAGAAACAACAATATTGACGATACCTTACCCATTTTGGACGA CTCAACCTCAAGAGACGACTCACAAATTACGCAAAGgtatgcttttttaa acaataattGCTTTACACTTATGTTTTGTCATAGTAAATTGATTACCTTT GCATCAATAAACTATTTCCTTATTGTGAATGTTTGGTTTTGTGGCTTACG AGTGCAAAATGATTTTAACCATTTCAAAGACTTTCTTGACAACATTTTCT TTGTATaaacaatattcaaaatttATCCTGTTAAAGTGGAAACAATTCTG TAAAACAACACAAGATTAAAATGTCCTTTAGAATTTAAACATTGTATCAT CTGGCATATGTGTAGTCATCTAGCATGCCAAACACATATCAGCATTAGCC ATTCAAAAGTGTCCAAATGTGGATGGTACATTGTTTAAAACTAAAAGACA AGTTTTGATTACAATGCTAAAAAACCAtgcaaaatttgaccaaatagTTA GATTGGGTGTGCATGTTGTTAGTCATTAAAAATGCCAAAATAACATCATC AGTCAAAACATTCTAAACCATGTTTAAACTGTACAAATCATGATTTAGCT TGACGctcattttttgcattttttttgtcatttttttcaaagctttaaaa attctttttacagAAAAGCAAAAACGGCTAAGCGATCCATTAACAGGAGA AAACACTATCGACAAGATATGAAAAGAAAGATTAAGCAGAGAAAAGGGAA AGCAAAAGAGCAAATGAAACACAATTTAATCAATGCCAAAAAGGAGTTAA AGAAGTTAAAGAACGAATTAATTACACAGAGTTCAAAAAGAAAACCAATT AACCGAAGAGTAGTCCAGAAACTTGCATTTACCATGCCTGCAAAAACCAA ATATTctcaaatgaagaaaaattgtcGAAATGAGCTTTTGTCCTCCTTAT CGTCCACAATCCCAGCTTTCACCAAGGACAAAATCTCTCTTTACAGCAAT GGGTATCCTAAATGGTCTGGTGTTTTTGGAGAAGTTGTATTATGCAAGAT AAACTTTCTTGGCATTACATGTgccaagaaaaatatcaaaggaACCATGG CAGACTTGAGAGCTGAAGCTTTGGTTCTTCAACACCTTTCCGGTTCTAGT TTTGTGCCATATTTATTTGGTATACTTGATTCTGGTTCAATTTTAATGGA ATTCGTATCAGGCTCAAAAACCAGCATTACAACTGCTCAAACACTAAGAT CTGTTCttggaaaaagtaaaattaagaaATCACAGTGGTTCAAAGTTTGC AGGGAGTTAGTTGAAGGCCTTACTTATATTCATGAGAAGAATATTCTTCA CAATGACTTGCATGGAGAGAATATTCTTTTAAGGCCTTCCCTTTCTCCAT GCATAATTGATTTTGGTAAAGCCACTCTCATCAATGCGCCAATGATGTAT GATATTGCACCTGGCTCTAAAGAGCAAGATATTTATAATAAGAGGCATCA GCATCTTGCCTTTGAACTTCGAAATATTCAAAAGACAAAACAATCTGAGG CCACAGATGTATACTCGTTGGGGTATAATTttagaaacattggaaaattt gAATCAATAAAAGAGTTGGCTTCCCTAGGTTTGAAGATGTTGACAGAGGA CCCCGCAAGTAGATACATCTTGATTGACTGTTCGGTGAACTTACTTAAGT TTGACCAAATCAATTGAACTTCTGACTTAAATACAGTGGTAGTGGTTTTG ATACTTTTTAGACaatattttcttactttttataagaatatcatatTTTA ACTTTAGAGTTCTGTTTtcttaaaagacattttttcctcttttcaataAT CTTTGTACTCTCTATtattattttgacaattttttccaTCCCTTTTTGGA AGTTATGAATTATTTTAACTTTAACAAGACATTTAAGAagcaacaaaatt tttgaacaaagagaaatttatgaaaaattttaatttatctaccttaaggg aactaattttcccgGTAACtaattttttgcgaaaattagttccctttaaG GTAAATCTTCCTTTTATCGTACCAATTGCTTGGTTACGATGTAATAcaca ctttttcttttataagaataacttctatcagaatatcagggtgagttAGT GTTAAACCAAACTGTAGGCCTAtcgtttagaacaatagaaaaataaaaaa aatgttcacCCTTAACCAAAATActcaattcttataaaaaaacgtgtatc aataATCAATTTTAGCAAAACAAGGCTCTCAATTTTTTATACATCTTAAA AACGGTGGTTTTTATAGGAGACAATTATCTCAGGAGAGGCGTCTAGATGG GTTAAGGTTACAGGAAACCAAAAAATGATCTTTGCTTGTATTTTTATTCT ACATTCAATTTAGGGAACTTGATCAAGTCAAAGATGCACTCAATGCGAAA ATCATAAAACAACAAAAGGATATGGAAACACTGGAGCGAAAATATGAAGA TTTAAAGGTGCTTGTTATGGAAATTTATGCACGGGAAGAacaaaataaag taaaagagaAAGATCGAAAACTGCCACCAGCTCTTTCAGTAAGTTTCCTT TTTTAATAGTATAGATTTATCCATCCTTGATAAGTTATCATTTTTGATGC ATTTATCTTTTGGTAGTTCAAGAGATAGTAGTTTGAAATGGTACATTTCA tataatttgattttataaCATAGATTCTACCCTTAGACTTCAGGGTCTGA gactttccaaaattttcgtgAGAGGGTATAAGCTATAAGCAAGGTTCAAC TGGGACAGCCAGTTAACAAttcaaattgtaatttttttgcctgcggcgtc ATTTTCCCCCTTTTCCATTGTAGAATTTTATTAATAAGCAAGTTCAACCT GAAAAATTGCTTGTACTTTATTTATAAAAGTACTTTAAGTCAGCAAATTT CGtaagggtcaattttttttcatttttgtaaggGGGTTGCCACTTAAAGG GGGTCTTCCTACTTaaggggggtcttgacccctctaaaCTAAGCCCCAAC TAAGCATAATATTTCATATAATTAACTGTCTGTAAAAAGTCAGTCTATAA TGTTTAATTGCCCCTATTTGTTTACAGACTCACGTACATTTGGCTTACGA TGGTTTAAGCGTTGACACGATATGGAACTTCAATGAAAGTTACCGTTCCA AACACAACAAAGAAATTAAGATGAAAGTTTACAATTCCCTTCGGACATCT AAAGTGGATTATGAAGAGAAGTTAACTTTCAGTAAGTACaacctaaaata tttttgaaagactgATTTTATTATTCATCTTTCTCGTTTTCTATTCCTTG CAAGAGGTTAAATTAGACCATTCTTCTTATAAAGACTCCTTAAAGTATAA TAttaaaataaattcaacaaGGGGTTACGTGTTTGCCGGAACTTAACTGC TAGGAAAGTATTATTCTTTTCTCTAGGGTGTTGATGTTGTCTCGGCAAAT ATGGAAATACAAATTTATTAGTTTATTTGTCGATTTAATTTTAAATGTGT TTTTGTCTTGTTTAGGAGCTATCTATCGCTATTTCGAAAATCTGAAGAGG CAAGAAAAGGAAGGACCAGACACAAAAACAACCAAGAGGAGAACTACTAG GAGGCACAGGGTAAGAATGAAAGTTTTTATCATTTcagatcattttcaaa tttatgtcAAGTTACAGCAAAACACTCgatgcagggggggggggcaNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACtgcttcccccccccccct gctcgATGTAAGCTTAATTTGAAAGTAGTAATAAGAAAATAATGATCTTC ACTGAAGTTTTCCCAAAGAAATTGTAATATTACACTCACGAACATGTTTT CAATAAACTCAAAATCGCATTATGACTCATTTCTATCAAAAGTAACATCC AGCTTGTTATCAGCTAGTAAATCTGTACTGATCATTTGTTTCTTCGTTTA GCTTTTCCTTGCACGTGACAAAGTGGAAAAGGAGGGTGATGATGCTGAAC TCTGGCAGCACGCGTGTGCGAATGTGATGTCCGATGAAGAGACGGATGAC GAAGGACCAACGACAACGCATGTtttccgtcgtcatgattggaGGACAGA TGCATTCAACGATTTGATTGATCGGATCGATGCTAGCGTTCTGCAGATAA GTCGAAATTATGGAACCCCCTCGACCAGGAAGTTTCAAATAGCCAAACTT CCAGCAGCTTTGGTCCGATAACTTTTCATGGTTTAAATTTatcttgtttt attttgttttcatcttTTTCGTATCTTTTTCAACTAAATAAGGCTTAATT CTGCAATTCAGAAAATTGTTCAGTGTAATGCACTAAACTGTTAAGATAAG ACACAATAAAGACACAATAAGACACAGAAAAGCCTCGATGCCTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036298TCONS_00036298Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036298-proteinTCONS_00036298-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001437supercontigsc0001437:21379..28972 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16 0.04 0.07 0.03 0.03 0.05 0.05 0.06 0.04 0.03 0.05 0.08 0.11 0.09 0.54 0.46 1.22 1.49 0.3 0.38 1.54 1.09 0.31 0.38 0.72 0.22 0.02 0.02 0.08 0.06