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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036246 ID=TCONS_00036246|Name=TCONS_00036246|organism=Clytia hemisphaerica|type=transcript|length=1128bp
AAAAACTCCAATAAAATTGGACCCGACTGTACTCAGCAACTCATCAACTG
aacagctttcaaataaaacCACAAAAGCCAATATTTCATTAGAAATACCA
GCTGGCATTCAGACGTCAGAGAAAGTTTGTAACCTGATAACTGGTAATAT
TTTAACTTAGtcgataaaaacaaaatgaaaatcactGGTTGAATGAGGAG
AGAAGATGCCAGTACAGACAGTCGTAGTATCCCCCATCACTGGCTTGTTG
GAAAAACATGctcaagaagaagaagatgaagaacaaaacgaaatcaaaga
aGAGAAATCAAAGAAGCCGGAAAGAAGTTATTCAGTGCTCTCTATCATCT
CAAATGGGGCGAACATTTGCAAGATATGTCACAGTGAAACAGAGAAAGAT
GACGAACTCATCACACCTTGTTACTGCTCTGGCTCTTTGCTCTACGTTCA
CCAGGGatgtgttcaaaagtggatCAAGGCTACGGATGCCAAAACCTGTG
AATTGTGCAATTATAATTATCAAGTGAACTCCACTGTCAAGCCAATCATA
GAGTGGAAAACGTTAGCGTTGACGCACAGCGAACGACGGAAAATACTCTG
CTCCGTTGCATTTCACATCGTAGCTGTCACATGTATCATTTGGTCATTAT
GGGTGCTCATTGACCGCACTGTAGAGGAGGTCAAAGATGGAAACCTCAAG
TGGCCTTTTTGGACCAAACTGATCGTTGTTGCTATTGGATTTTTTGGAGG
AGTAGTTTTCATGTACGTGCAATGTAAGGTGTACGTCCATCTCTTCATGC
GTTTGAAGGCCTTCAATAGGGTGATTTATGTTAAGAGTGTTCCCGAAGAT
GAAAGACAACAACATAAAGTGGACTTAGTTGAAGGGAACAATCAGCTGGA
AAGCAAACTTTAAATTCCTCTTTTCGGGAAATACCTTTCTGTTTATTATA
TTgatgtttagattttttcaaattatttacacaTTTATAGCTTTATTTCA
TCAGTATGCGCGCCATATACAATGTATATGAGCAAGTACCTTATATTCAT
TTAGCTAGAGTCCGCGTCATCTTCCTTCAGTTGATATTCAGTTTCAAGTG
GATTTTTTCTATGGTTCGTATAGAGTGG Run BLAST on NCBI protein sequence of TCONS_00036246-protein >TCONS_00036246-protein ID=TCONS_00036246-protein|Name=TCONS_00036246-protein|organism=Clytia hemisphaerica|type=polypeptide|length=235bp
MPVQTVVVSPITGLLEKHAQEEEDEEQNEIKEEKSKKPERSYSVLSIISN
GANICKICHSETEKDDELITPCYCSGSLLYVHQGCVQKWIKATDAKTCEL
CNYNYQVNSTVKPIIEWKTLALTHSERRKILCSVAFHIVAVTCIIWSLWV
LIDRTVEEVKDGNLKWPFWTKLIVVAIGFFGGVVFMYVQCKVYVHLFMRL
KAFNRVIYVKSVPEDERQQHKVDLVEGNNQLESKL Run BLAST on NCBI transcript from alignment at sc0001431:3451..13844+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036246 ID=TCONS_00036246|Name=TCONS_00036246|organism=Clytia hemisphaerica|type=transcript|length=10394bp|location=Sequence derived from alignment at sc0001431:3451..13844+ (Clytia hemisphaerica)
AAAAACTCCAATAAAATTGGACCCGACTGTACTCAGCAACTCATCAACTG
aacagctttcaaataaaacCACAAAAGCCAATATTTCATTAGAAATACCA
GCTGGCATTCAGACGTCAGAGAAAGTTTGTAACCTGATAACTGGTAATAT
TTTAACTTAGGTAATAAAGTCCTATTTattatagaccttttgctagctAT
ACACACAATGCATGTGTCCTGTGTGTGTGTGTGCATAAGTttattctttt
atcatttttttgataattgaaCGTATATAATTGAAGCAATCgtaatcgaa
cggcaaatcctgagtaatattcgattgcgattcgattgcgttcaacaatc
gaattgcaattattcgattgtgttcaattgcgttgtTCAATTGATTTGGC
GTTTGATTCGTTCGATTTACACCGTTCTAGTGATGCTCTGCCTCTGGACA
CTggagcaaaataaaaaaattcgttcGACCAAGTTTGGTAATCTAACCCT
ATCGTTTGATTTCGTTcaatgaaatttgatggttcgattAGGAGAATCCG
TTccatagggttcggttgacattgCCTGAACTAGCGTCCCACCCCtatgg
atttcgtgtaactaacACCGAAGATCTTtggtagcaactccagaagattt
ttcaaattttaattttttttttNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNtaaaaatgtcaaaaaaaaggttaggaaaatagct
tggaaaaattcgaaaaatgtgtcaaaaaagaaaaaaaagaaattttccag
tcatgcttcttcaattttgcatgTCTCtctttctagtgtagctagatacc
tgaaatttggagggagaattctttgatggtgttagaatattattatataa
aaatatttgtaaaatatttagtatatttatcaaaataatgggccattcca
gtttttattcgttacccccaatggacgacatggaatttccgtagcaaatt
gcttttAAGAAAGTCCagaatttccgtaacaaatttacaaaatacctatc
aaaaccgtggaattccgttactgtaacctagaaaaatcatggaattccaa
tacgttaatgcaaaattaagtaaaattcatggaattccgatactttctct
ttaaagtttgcctggaattccgtgccaaaatttatttcaaaaattgatgt
catccattagggggtaattttttttttctggaatggcccaatgaaagata
tatgtttttttgaaaaaggaagacattgcattgttttatttttgtttttg
aagaaaatgagcttggaaaaggttgaaatgagtcaaaaaaggtggcagga
cccattttcaaggggcctctggaaatggaggaacaaaaacttatcaataa
agaataagtttttctgaaaggagaaaccccaaatgaaaagaaaatccatt
tcggcagaaataaaaacttttttttgggacattcccatgcaaaagaagca
aaaaagtgaaaaaaactacatgaaaatgaaagaactaagattagcgaatg
tgatttttgaattcctcatcctttttctgataaacatacaaagtttcagc
cttcaaatacattttcctccgtttccagaaacatttgttcaGCAATAGTT
gcacattttttttctcccgtcggcaaacaattttcaaaatgttgcaaagc
gttcggcattttaccaatttgccgtctagcctgtgtccacagtgttatat
agcgctggaaagctaagctttcatttagtaaaaatcggaacgctttagca
tacatagaaaaaaagttcgaagggttcaaagttcacggaaaaatgaaaca
tttggtttgacgtcaacgaaagttgcatgacttctggaatCGCTATCTTt
ggcgtacaactgaaacgtttttggcgcattggcgtaagggtaattacaaa
gattgttgtttttcagttggtgtaaagtaataattccagctcggcgtgaa
tgactccgTAACCCATCGATTTTCAGCtttcatttggctaaatttgcttt
cgctTGCTTACGCTCGCGTAAATTTATTAATcatgttggcgcatgcgcct
ctcttcccatcttgcacccttattgaaaaattgaatgttggtacaaaaga
aattttgcttggcgtgaggcttgctgtacagaaaaatatcttcggcgcga
gatttcgtggaatccatactgggtcccaccaaaatgcgtatcaaagatta
atgctatGCGAAAATGCTAATATTGTTTGTTGActcacaagcaaaaaaat
gcacaaaatatcgcagaggctaatcaattttaatgacttttttgactaat
gaccaagttaaaaatttttaatttttttatatttgagtattaaaaaggca
tgcattcaaataataaaggtttatataaatttttctctgggctagttagt
aaaatatctcaaataggctctgcgatggagtgtaaggctgaaagccacat
gaatatggttcatcctataaaaggaagttcattctatggtggcctatctt
gaagtgaaggtggttgaacaaaatgtttNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNtcacacaaataaattacgctgggaaagtccgcgag
gacaacacgcggtcttaacatttttccctcgcaagtttggggggaaaacg
aaagtactctatattttgcgcatggggaagtgtaagaaagacttacaaaa
tagaaaagttttgttttggggtaaagaatcagtattgtgaatttaagcga
gtttctattttgcaatttttctacagagccaaataaagattttttctatt
gttcttgctcgattgcctctaagGGTAAGTTCCGTAGGAATGAGGCTATC
GAGACATAATGTGACAAATTTGCGGGaaaacgaaatttaacatttCTCTA
GGCTGTAAACAAGACCTTAAAAATCAgagctgtctcgggaattgaatgac
aaaatttggtttcttgatattttggctgCTGCAAGTTCGCAAccggtcat
tttgtctcattttaagttttcaagtcttaattaattgtcttgggaacttg
aacttgattcaggtaactctcatccttgttgttgcaaatacatccgtcat
gtagatgactgatgttgttttttctgaaagcttgatgttgctttttctga
aagcttgatttcctagtgcgACTACTGGTTGATTCCCGCtgagtcactga
gcagaattttcgcgggccactcacatatcgatttttcCCACGCTTAGCGT
CATTCCGATGCTAATTTAAAAAACCCACCCACTCCCTACCCTTAGCATCA
TATTATGAAATATACCAAAAATCgttgaaaacctttttttcctTTCTCAC
TTCAAGTATTGATGTTCCACTGCCAGAGAAGTTGCTTCCCCTTCTGCTTG
ATATtacattccattgtttttttaNcagcctggagacttcaaaaattgtt
cgatttggctgaaatttggcacacttgttccttgggtgaatatctggggg
tgtttttttcatttttgaaaattttgatttttggggcctggggacgagct
ttttgccaaaatgaggctaaaactttgggggNAGACCTGATTTTATGAGC
GTCTCTGGCATTTTACTATACGGGTTTATTCTTGATGCTGTGAAAAAGAG
ACAAATTTGAAGTGAGGATGTTTTAGTTTTGTTGAAAAGAGGCTGCTACC
TGCAAAATAATAAGTATGAAAGTTAtagttttctggaaatttgaacaTCT
CTTGGGCCTCGAAAATCGATATTTCTAGTAGATTTTCTTAGCGACATCCG
ATCCAACCCACCCACCCTATAGCGTCGGGATGACGCTAAGCGTGGgaaaa
atcgatatgtgagtgtttgaagaaagaagaaaaatttcacACCCAGGATG
GGACTAAACTGCAAGAAtgttattctcaacttcagttgagttagaatctg
agaatgtgtgtgtgtgtgtgtgtctgtctgtgtgtctgtgtgtctgtgtc
aTTTTtagaatcctcaactatcctagtttaagaaatgcttggtccccaaa
gctaattcctggtcaatttttcatactgggcctgAGTTTAGGGGGTACNa
acgaggctaaagctttgaagcagcctacaggcctccaaaatggtcggatt
tggttgaaatttggcacacttgttcattgggtaaatatctgagggtctac
aattgggcctatgaataatttgaagccactgaagttgagcccagtgcgtt
gcgcacgtttgACTATATATAATAAGTGTGCNAAAGCTAattcctggtca
atttttcatactgggcctgagtttagggggtactttttaccctttgtaag
gatttgttaaggaaaatatatTTCCATGTATGATACAATTTGTTATATCT
CATGAAtaaattgaccaattgctttgaaactttggcaaaagtttcaagat
agattggtgatcatcattggcaaaaattctttaagaaaaattatttttgg
gggtTTACCTGGGAGGAAAAAGGggaaatttgggtattttcactgaattt
tgacactctataagactgggacctaccgaaacaacttttaatgagacaca
aacttTTTGTTATGACAAAATTTAATGCGATAcaccagaaaaatttcttt
tcaactgTATATAGTATCATTTTCAAcgcttcagggggtaaaaaatgccc
attttattgaattttgacacaatttgagcaattttcactgctTATCTCGC
CTAAAATATATTNACACAAAACCAGGGGTCAATCAACAAGTcgaatcttt
ttttaattcaaaactaACTTTTATTCGATGAAAAGTCTTAGCCCCTTGAA
TATCAAATTAAAGAGAGTTAGTTGTAACAGTTTTTACATGCTCCCCTTTT
TGGGGGCCAAAAGCTTTTATACCTTGGGTTTACCTTGCAAGTTTGAGTGA
TCCTTTTTACTTGCATTCATTTAGTATAGGGCTTAAATAATTTTACAAAT
TACAGGCAAATAGATTATTCAGTGTGGTAAGAAATGTAACTGATTTTGGT
AAAAATTCATCAACCATACAAAGTTCTTAAAATCATGCAGCTTGGTGTAC
CTAAAAAAATATGGAATCCATGCAAACATATGTTTCCTGATAAGATCAGT
GCTAAAGTGACTTTAAAtggtctaaaataaaaaaaatgaaggatAGTTCT
AATgctaataaattttaaaatgattttgataggTTATACTCAATGTGATT
AGAGTTTTTGGGCCAATCTCTATAATTCTTCTAATCTTTCAgagcatttt
ttaaattctttcttTGAGGTTTGAGgggatatttttttcattcaattttc
aaaaccttGACAAAAAGCAAAGATTatcttttttttgtcatttggcAAAG
TATACCAGGAAGACATTCCAAACATACTACTTTTTTGAAGACATGACTGA
ACGTTACAATGGGGGTTTCAGTTGACATTATCAACTTTACATCATAGCCT
TTTCTACACTACAATCACATGTCATCAAGTGTCAattgttttttgcaatt
ttgtatGCTACTAATATTTAGAATTATAACTTAAAATGGTCAGCAGAACA
GACTAATTGCCGAGACGGGTGGATAGTTTTTTCACTCTATATTACAttat
gaaaaaaggaaaaaaggaaaacttaTCAGAGATATCATATTTTAAATACA
CTCAATATCTCATTTTTCATTGTAGACACCAATTTAAAGTGAAAATCTTA
TCAACCCTTATTTTTGATGTGAATTTTTAATCTCATTTTCAGAGATAATG
TTTAATTTATGCTTCAATTTTGTGGCAAGAAGGTTACTTTTCCTTTTTGC
TTTTCCTTTTGGTTCAACTTGAATGGTGCATCTTTTCATCTTTTCGTCTT
CTTTTCTCTGTTgctaaaaagctttaaaaataatgacgtttgttattctg
aaaatgtTCTTCTTTGCTCAACCAAGAAGACTATttacaaaaagtccaaa
aatgtagtttgtatatttttagtcgataaaaacaaaatgaaaatcactGG
TTGAATGAGGAGAGAAGATGCCAGTACAGACAGTCGTAGTATCCCCCATC
ACTGGCTTGTTGGAAAAACATGctcaagaagaagaagatgaagaacaaaa
cgaaatcaaagaaGAGGTATACGCTCCAATCTTTTTATTACTTCGTCTGT
ATAAATATTAATATTATCTTCTTCAGACTTCATCTGTTTGTTCAAAAAAC
TTGACttttttataaagtttgttttcaattcCTTCATTTTTTGGATTTAA
TATATAATAAGCAGATAAACGGTTTATTTTGGAACAGTTTGAAAGAGTTG
TTCTTTAGAAAATTTGCCATAACCTCTATTTGTAAAAGTTACATTGAAAC
GTTGTAGGAACAAATTTTAGAAAGTATTTGATTTAAAATACATTGTATAT
TACATAAGGATGATATAACTAAAAGATATATAGGAAAATTTGTAAGTGAA
AATGTCATAAATTTGTCAtcaagaaatttatcaaaatcagAAGTATCTCT
TCTTTCAAAGGGTTTGAAGTTTGTCCCTACTCCTTCTCAAGTTAATAAAA
CCAAACTTAAGGAGGAGCTTGCGGTTTTTGGTCGGAAACTTAGGCTACGT
TGGCATTTTCGGGATGACGACAAGGAGTTTATTCCTAAtccttttgttaa
aaaaagcTCCTTTAATCCCAGGGGTAAAGATGCAGCCATTGAGGTATATT
TGAGTCGTTTGGAGGAGGAGATAAATAAAATTGATACAAAATTGACATAG
AATAATCTTACACGCTCTGAAAGGGAGGCCTTAGACACTTTAAGAGATGA
CTCTTCAATTATCATCAAAAAGGCTGACAAAGGTTCAGCTGTGGTTGTGT
GGGACAGAGATGACTATCTGGCAGAGGCTGAATCTCGGTTGGGGGATGAG
AGTGTCTATGAAAAACTAACAGACACTGTGGAAGTCACCTCATTGATGTT
ATTGAAAGTTGTCTCTTAAACATAAAGGTAAGGGGTGATATAGGTGATAA
GACTTTAGACTATTTTCTTGTGAATAATCCTAGGTTGGGCAGGTTTTATC
TTCTCCCGAAAATCCATAAGCGTCTTTCGAGCGTCCCTGGGACCAGTCAT
TTCCAACTGTGGCTACTATACCGAAAACATCTCAGCCTTTCTTGATTATC
ACCTTAAACCCCTTGCCAAAACAGTAAAATCTTTTATTAAAAGGACACca
ataattttttacaaaaattaccAGAGCTTCCAAAATTATCTAAGAATAGT
TTATTATGTACTATTGATGTCGTAGGACTTTATCCTAATATTCCTCATGA
TGAAGGTTTGGAGGCTGTTAGAAAAAAACTTGACCAAAGGCAAGACAAAA
AAATCTCAACTGAATCTTTGGTTGAACTTGCTGAATGTGTTCTAAACATA
ATGGTCAATTTTTTAAGCAGAAGAGGGGTACGGCAATCGGGACCAAAATG
GCCCCTCAATATGCTATTATTTTCATGGCAGACTTGGAGGAAAGGCTTCT
GGGTGCTTGTGAGTTAAAACCTAAAATCTGGTGGAGATACATCGATGATA
TTTTTATGATCTGGGAGCATGGGGAAGAGAGCCTTCAAGAATTCATGAAA
ATGATTAACAGCTTTCATCCCTCCATCAAATTTACCTTTGAATACTCTCC
GACTTCTGTCAATTTTTTAGATGTCCAAGTCATTAGGGTTAATGATAAGT
TAGTGACGGACCTGTATGTCAAACCTACTGATACCCATCAGTATATGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNATAGGCCTTTTATGTTTTCCCTGGTGTATATAGCGATATGT
TTAAAAACCTtgtcaaagaaattcatttttatGTTGAGAAAGGCCTTTTG
GCCGAAATATTCATGCAAAAAAGACGTGTTGTTTTTGATCAGttgtatat
tacattatatgaTTATTTCTTTTCACTTACCTAGAAATCAAAGAAGCCGG
AAAGAAGTTATTCAGTGCTCTCTATCATCTCAAATGGGGCGAACATTTGC
AAGATATGTCACAGTGAAACAGAGAAAGATGACGAACTCATCACACCTTG
TTACTGCTCTGGCTCTTTGCTCTACGTTCACCAGGGatgtgttcaaaagt
ggatCAAGGCTACGGATGCCAAAACCTGTGAATTGTGCAATTATAATTAT
CAAGTGAACTCCACTGTCAAGCCAATCATAGAGGTGAATTTTAATTGGTC
TgaagtttttctgaaaagttAATGAAGAAACATTTTGTGCTTTAGACCTG
GGTTCTAGGTCGAGTCTTCTTCGATCTTTTGACTTATTAAACCTTTTCAG
CGATCTTATTTCTTGAGCCTACTCTCGTCACGAAATAATCGATAGTTTCG
TAATTCATATGTAGCAGAAAAATACGACGTGAAACCGCGAAAGTAACATC
ATAGAAATCGATTAGGATTTGAGAATAATCAGGCTGTAAATAGGAATTTA
GACAAACTCTAACCGCCCATTTTTTTCACGCCATTACATTAATATCCTCA
CTACTATTTCATGGTCCCTTTTCATATCATGATGAAGAAACAACAGGTCT
TGTATCTTTGTACTTTCAGTGGAAAACGTTAGCGTTGACGCACAGCGAAC
GACGGAAAATACTCTGCTCCGTTGCATTTCACATCGTAGCTGTCACATGT
ATCATTTGGTCATTATGGGTGCTCATTGACCGCACTGTAGAGGAGGTCAA
AGATGGAAACCTCAAGTGGCCTTTTTGGACCAAACTGATCGTTGTTGCTA
TTGGATTTTTTGGAGGAGTAGTTTTCATGTACGTGCAATGTAAGGTGTAC
GTCCATCTCTTCATGCGTTTGAAGGCCTTCAATAGGGTGATTTATGTTAA
GAGTGTTCCCGAAGATGAAAGACAACAACATAAAGTGGACTTAGTTGAAG
GGAACAATCAGCTGGAAAGCAAACTTTAAATTCCTCTTTTCGGGAAATAC
CTTTCTGTTTATTATATTgatgtttagattttttcaaattatttacacaT
TTATAGCTTTATTTCATCAGTATGCGCGCCATATACAATGTATATGAGCA
AGTACCTTATATTCATTTAGCTAGAGTCCGCGTCATCTTCCTTCAGTTGA
TATTCAGTTTCAAGTGGATTTTTTCTATGGTTCGTATAGAGTGG Coding sequence (CDS) from alignment at sc0001431:3451..13844+ >TCONS_00036246 ID=TCONS_00036246|Name=TCONS_00036246|organism=Clytia hemisphaerica|type=CDS|length=2124bp|location=Sequence derived from alignment at sc0001431:3451..13844+ (Clytia hemisphaerica)
ATGCCAGTACAGACAGTCGTAGTATCCCCCATCACTGGCTTGTTGGAAAA
ACATGctcaagaagaagaagatgaagaacaaaacgaaatcaaagaaGAGA
AATCAAAGAAGCCGGAAAGAAGTTATTCAGTGCTCTCTATCATCTCAAAT
GGGGCGAACATTTGCAAGATATGTCACAGTGAAACAGAGAAAGATGACGA
ACTCATCACACCTTGTTACTGCTCTGGCTCTTTGCTCTACGTTCACCAGG
GatgtgttcaaaagtggatCAAGGCTACGGATGCCAAAACCTGTGAATTG
TGCAATTATAATTATCAAGTGAACTCCACTGTCAAGCCAATCATAGAGTG
GAAAACGTTAGCGTTGACGCACAGCGAACGACGGAAAATACTCTGCTCCG
TTGCATTTCACATCGTAGCTGTCACATGTATCATTTGGTCATTATGGGTG
CTCATTGACCGCACTGTAGAGGAGGTCAAAGATGGAAACCTCAAGTGGCC
TTTTTGGACCAAACTGATCGTTGTTGCTATTGGATTTTTTGGAGGAGTAG
TTTTCATGTACGTGCAATGTAAGGTGTACGTCCATCTCTTCATGCGTTTG
AAGGCCTTCAATAGGGTGATTTATGTTAAGAGTGTTCCCGAAGATGAAAG
ACAACAACATAAAGTGGACTTAGTTGAAGGGAACAATCAGCTGGAAAGCA
AACTTTAAATGCCAGTACAGACAGTCGTAGTATCCCCCATCACTGGCTTG
TTGGAAAAACATGctcaagaagaagaagatgaagaacaaaacgaaatcaa
agaaGAGAAATCAAAGAAGCCGGAAAGAAGTTATTCAGTGCTCTCTATCA
TCTCAAATGGGGCGAACATTTGCAAGATATGTCACAGTGAAACAGAGAAA
GATGACGAACTCATCACACCTTGTTACTGCTCTGGCTCTTTGCTCTACGT
TCACCAGGGatgtgttcaaaagtggatCAAGGCTACGGATGCCAAAACCT
GTGAATTGTGCAATTATAATTATCAAGTGAACTCCACTGTCAAGCCAATC
ATAGAGTGGAAAACGTTAGCGTTGACGCACAGCGAACGACGGAAAATACT
CTGCTCCGTTGCATTTCACATCGTAGCTGTCACATGTATCATTTGGTCAT
TATGGGTGCTCATTGACCGCACTGTAGAGGAGGTCAAAGATGGAAACCTC
AAGTGGCCTTTTTGGACCAAACTGATCGTTGTTGCTATTGGATTTTTTGG
AGGAGTAGTTTTCATGTACGTGCAATGTAAGGTGTACGTCCATCTCTTCA
TGCGTTTGAAGGCCTTCAATAGGGTGATTTATGTTAAGAGTGTTCCCGAA
GATGAAAGACAACAACATAAAGTGGACTTAGTTGAAGGGAACAATCAGCT
GGAAAGCAAACTTTAAATGCCAGTACAGACAGTCGTAGTATCCCCCATCA
CTGGCTTGTTGGAAAAACATGctcaagaagaagaagatgaagaacaaaac
gaaatcaaagaaGAGAAATCAAAGAAGCCGGAAAGAAGTTATTCAGTGCT
CTCTATCATCTCAAATGGGGCGAACATTTGCAAGATATGTCACAGTGAAA
CAGAGAAAGATGACGAACTCATCACACCTTGTTACTGCTCTGGCTCTTTG
CTCTACGTTCACCAGGGatgtgttcaaaagtggatCAAGGCTACGGATGC
CAAAACCTGTGAATTGTGCAATTATAATTATCAAGTGAACTCCACTGTCA
AGCCAATCATAGAGTGGAAAACGTTAGCGTTGACGCACAGCGAACGACGG
AAAATACTCTGCTCCGTTGCATTTCACATCGTAGCTGTCACATGTATCAT
TTGGTCATTATGGGTGCTCATTGACCGCACTGTAGAGGAGGTCAAAGATG
GAAACCTCAAGTGGCCTTTTTGGACCAAACTGATCGTTGTTGCTATTGGA
TTTTTTGGAGGAGTAGTTTTCATGTACGTGCAATGTAAGGTGTACGTCCA
TCTCTTCATGCGTTTGAAGGCCTTCAATAGGGTGATTTATGTTAAGAGTG
TTCCCGAAGATGAAAGACAACAACATAAAGTGGACTTAGTTGAAGGGAAC
AATCAGCTGGAAAGCAAACTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036246-exon-sc0001431-1491911889:3451..3610 | TCONS_00036246-exon-sc0001431-1491911889:3451..3610 | Clytia hemisphaerica | exon |
| TCONS_00036246-exon-sc0001431-1510915933:3451..3610 | TCONS_00036246-exon-sc0001431-1510915933:3451..3610 | Clytia hemisphaerica | exon |
| TCONS_00036246-exon-sc0001431-1575043694:3451..3610 | TCONS_00036246-exon-sc0001431-1575043694:3451..3610 | Clytia hemisphaerica | exon |
| TCONS_00036246-exon-sc0001431-1491911889:10023..10166 | TCONS_00036246-exon-sc0001431-1491911889:10023..10166 | Clytia hemisphaerica | exon |
| TCONS_00036246-exon-sc0001431-1510915933:10023..10166 | TCONS_00036246-exon-sc0001431-1510915933:10023..10166 | Clytia hemisphaerica | exon |
| TCONS_00036246-exon-sc0001431-1575043694:10023..10166 | TCONS_00036246-exon-sc0001431-1575043694:10023..10166 | Clytia hemisphaerica | exon |
| TCONS_00036246-exon-sc0001431-1491911889:12635..12883 | TCONS_00036246-exon-sc0001431-1491911889:12635..12883 | Clytia hemisphaerica | exon |
| TCONS_00036246-exon-sc0001431-1510915933:12635..12883 | TCONS_00036246-exon-sc0001431-1510915933:12635..12883 | Clytia hemisphaerica | exon |
| TCONS_00036246-exon-sc0001431-1575043694:12635..12883 | TCONS_00036246-exon-sc0001431-1575043694:12635..12883 | Clytia hemisphaerica | exon |
| TCONS_00036246-exon-sc0001431-1491911889:13270..13844 | TCONS_00036246-exon-sc0001431-1491911889:13270..13844 | Clytia hemisphaerica | exon |
| TCONS_00036246-exon-sc0001431-1510915933:13270..13844 | TCONS_00036246-exon-sc0001431-1510915933:13270..13844 | Clytia hemisphaerica | exon |
| TCONS_00036246-exon-sc0001431-1575043694:13270..13844 | TCONS_00036246-exon-sc0001431-1575043694:13270..13844 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001431 | supercontig | sc0001431:3451..13844 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008270 |
zinc ion binding |
Blast
BLAST of TCONS_00036246 vs. Swiss-Prot (Human)
Match: MARH8 (E3 ubiquitin-protein ligase MARCH8 OS=Homo sapiens GN=MARCH8 PE=1 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.703e-65 Identity = 107/193 (55.44%), Postives = 147/193 (76.17%), Query Frame = 2
Query: 329 YSVLSIISNGANICKICHSETEKDDELITPCYCSGSLLYVHQGCVQKWIKATDAKTCELCNYNYQVNSTVKPIIEWKTLALTHSERRKILCSVAFHIVAVTCIIWSLWVLIDRTVEEVKDGN----LKWPFWTKLXXXXXXXXXXXXXMYVQCKVYVHLFMRLKAFNRVIYVKSVPEDERQQ--HKVDLVEGN 889
+S SI + +IC+ICH E + + LITPC+C+GSL +VHQ C+Q+WIK++D + CELC Y + + + +KP+ +W+ L +T SERRKI+CSV FH++A+TC++WSL+VLIDRT EE+K G L+WPFWTKL+VVAIGF GG++FMYVQCKVYV L+ RLKA+NRVIYV++ PE ++ K L E N
Sbjct: 67 FSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQNCPETSKKNIFEKSPLTEPN 259
The following BLAST results are available for this feature:
|
