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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036146 ID=TCONS_00036146|Name=TCONS_00036146|organism=Clytia hemisphaerica|type=transcript|length=316bp
taacAACGATTTGAGAAGATGAGACGAATGAATGGAAACACAATAAATCG
AACAAAAGGATGATTTTGaaaagaaccaatcagaaatcaTGTCTTTCTTT
TCAAACGCTTTCCAAAAGTTTTTCCGCAATTGGAAAATATGGTTCTACTG
TTCGgttgaagaaaaattcattcattcaactTATGTAAATGATGGGATAT
GTGATTGTTGTAATGGTGAGGACGAGTGGATGAAAATGCAACCTTTGTAT
ATTTTACCTCGAAAGTTCCcttctaaaaagtttttcccCTGCCCCAATAC
GTGTGGGGGATAACTT Run BLAST on NCBI transcript from alignment at sc0001418:7097..9183- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036146 ID=TCONS_00036146|Name=TCONS_00036146|organism=Clytia hemisphaerica|type=transcript|length=2087bp|location=Sequence derived from alignment at sc0001418:7097..9183- (Clytia hemisphaerica)
TAACAACGATTTGAGAAGATGAGACGAATGAATGGAAACACAATAAATCG
AACAAAAGGATGATTTTGAAAAGAACCAATCAGAAATCATGTCTTTCTTT
TCAAACGCTTTCCAAAAGTTTTTCCGCAATTGGAAAATATGGTGCGCATG
TGCGGTAGTCTTCTTCCTTCTGAATGTTATTTATCTTCTATCGCAAGTCA
ATCGATCATCTAAAGCTTCGAGCAGCGCTATAAATGATCATGCGGCTGAC
TCGATGTTAAAATCATTAGACAAAGAACGTGGCGTGGATGATTCGATCTC
TCACACAACAAAAAATGATATGAGAACAAAAATAATGAGGCGAAAAAATG
ATGCAATAAGAAGCGCCGAATCTGTCAAAAATAGAATATCTTCAATGAAA
CGGGGCGCCCATCCATCACATATTATACACAAACTAGTTCAAAACGGTAT
TGGTTCAGAGGCCACTTTCACTTGTTTGAACGGTTTGAAGAAACTCACTT
TGAGAGATTTCAATGATGATTTTTGTGATTGCGTGGATGGTTCAGATGAA
CCTGGTACTAATGCTTGCAATAATGGAAGGTAAGTTTTTCAATATTTTTT
TGTTCTAAGGTTACAATGGAGCGAGTCTCGATTACTCGAAAACTCGAGCA
CGCACGGGGAACACAAACTTGCTCGAATTAAGAAGATTTCCAGTTAGGGT
AGGGTTTATAGTACATTGTTAACTGAATGGACTAGAAAACGTATTCGAGT
TAAGGAGATATTCGGTTTGTAGAGGTTCGAGTTATGGAGACTCCAATCTG
ACGTTTGAATTTAGCGTTTTAACAGTGACTTTAACCTTTATGATAACTCT
TTTTGACTTCACCAAGCATCATTTTTCATCATTCATGATTCAACCTGCGA
ATTGTCTTAAGATTATTGCAATAATGGAAGGTGGGTCCGTTTAGCAATTT
CAAATTTATTACTTCTCTCTCATTTTGAAGATGCGAAAAGTCTCATAGGA
GTCTCATAGCTACCTCTGAGTTAACTTTAAGCAAACATGGTAATATGAAT
ACTGTGTTAATATTATTCCCTTTCTAAGAAGACTTGGTCGGGCTATTCCA
GAAAAAAAATTTTACCCCCACCCCCCATGTTGAGGAGGTCTTTTGATTTA
GTTTTCAATTTCAGAATCCCCTTGGATTTTTTTTGGATTTTTGACTCCGT
TTTACTGACTTTTCACTACATTTAAACTGTATACCTTGGATTTTACACTC
GAAAAACCAGACCAAACAGATTTTTTATTTTCAAGGACGACCCTGGACGT
CACACCTACTCAACATAGGGTGTTCAGACTATTTCTGGAATAGCCCAATG
ACATTCAGAGAATTTTTCGTTTTGACATGTGACTTTTTTAACAATGACAA
TGACAATAACAATAACTTTTTTTTCACTATCTTTGATAACTCTTTTTGAC
TTCACCATGCATTATTTTTCATCATTCATGATTCAACCTGCGAATTGTCA
AATTGCCTTATTTTTGTCCTAAATCCCCTGATTTTGTACATTTACCTTGA
ATTCGGCGTATCCAGAAAGATTATTTCCGACCCCCCTGGTAATTATTAGG
ACCCCCCTGGTAATTATTAGGAGCACCCTGGTAATTATTAGGACCACCCT
TTATTTGGAAGCTTATCTTCCCCTTCCCGTTTTATTATAGGCCATTTCAC
AGTCGCAAAGTGTAATGGGTAATCAGGACCACTGCGCACTAATGACGACT
TACTATTGGTCCAAAGTTTTGATATTTGTTGAAGATTTTTGCGTCTAACC
AACGGGGAGCAGTTATCAGGGCGCAATCAGTCCTAATTACCCATGATCCA
GTTCGACTGGGAAATGGCCTATAGACACTTGAGATTAATTTGAAACTGTG
TATCTCTTCCAGGTTCTACTGTTCGGTTGAAGAAAAATTCATTCATTCAA
CTTATGTAAATGATGGGATATGTGATTGTTGTAATGGTGAGGACGAGTGG
ATGAAAATGCAACCTTTGTATATTTTACCTCGAAAGTTCCCTTCTAAAAA
GTTTTTCCCCTGCCCCAATACGTGTGGGGGATAACTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036146-exon-sc0001418-1575043694:9043..9183 | TCONS_00036146-exon-sc0001418-1575043694:9043..9183 | Clytia hemisphaerica | exon |
| TCONS_00036146-exon-sc0001418-1575043694:7097..7271 | TCONS_00036146-exon-sc0001418-1575043694:7097..7271 | Clytia hemisphaerica | exon |
| TCONS_00036146-exon-sc0001418-1510915933:9043..9183 | TCONS_00036146-exon-sc0001418-1510915933:9043..9183 | Clytia hemisphaerica | exon |
| TCONS_00036146-exon-sc0001418-1510915933:7097..7271 | TCONS_00036146-exon-sc0001418-1510915933:7097..7271 | Clytia hemisphaerica | exon |
| TCONS_00036146-exon-sc0001418-1491911889:9043..9183 | TCONS_00036146-exon-sc0001418-1491911889:9043..9183 | Clytia hemisphaerica | exon |
| TCONS_00036146-exon-sc0001418-1491911889:7097..7271 | TCONS_00036146-exon-sc0001418-1491911889:7097..7271 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001418 | supercontig | sc0001418:7097..9183 - |
Blast
The following BLAST results are available for this feature:
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