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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036082 ID=TCONS_00036082|Name=TCONS_00036082|organism=Clytia hemisphaerica|type=transcript|length=1387bp
ATCagataaacaaaatttttacGGACGCCGAAAACTTCACAATGGATGCA
CACGAGGCGAGAATgctttgaatgtttttgttttgtcatCATTCCTTTCC
TTCGACCTCACCACGTGAATCAGACGTCATCATGGAACGTATTATTactg
gcagttagtcacactagcgtcccgccaaaatgcgtatcaaagattaatgc
tgtgaAAGCGCTATagcgtttacttgactctcaagcaaaaaaatgaggcg
caaaacttctaaagggattcatgaaaaaataacccagcggtttttaatga
aattaacattttcaaaaactttgagaaattgcctaaaatttgagccatag
atgaaaaaatttggaacAAACATTGTTTTAGTTCTGTTGGTATGGTGAAG
GCAGCATTAGAAGCGATCAACGGGTTGAACCTCTTTGGTAACAAGGTAAT
TGAGTTGAAATAACTTCTTGGATTTCTTTACATTCTTGTAAGATAAAGTT
GACTATACGTATAGTATACGTCCAATGGATCTATGTATGTCAAATTTGTT
ATCTAATTTTACAGGTTTTAACTCGTTCTTCAGTGAACTCCTTCTAACTC
GAACTtttactattcgaatctttctataattcaaactaaATTTTCGGTCA
CCCTAAGCTGTTAAGTAATATAAAATAGTCTCTGTAATTAgaatatttct
ctaattcgaagagaACTTTTGGTCTcgtgaagatcgaattagagagagtc
aactaaGAGAGTTGGTCTTTACAGAAAATCTtcatcgaattacagaaaga
ttcgaatttcaGGGAGTATTTTATGCTAAAGGacccaatattttagttcg
aaatACAGTAAGATTTTGGATTTGCAaagtttcgaattagagagagtatt
ttgataaaaatcacGTACTTAGGAATATTCTCTTCGATTACAAATTGACT
CAAGGATAGTTAAACAAATACTTGATGGATaggacacccctgtgtcacag
acccgatgGAACACTCCCCCCCTCCACTGGAAGAATTGGTCAAAAAATCG
CCCTACTGTAATATATATACTCTAAATTTTAACCCCACTGAGGAATTGCA
CCCTGATTTTATCCCGgcattgaaaaaattacactccaaaaccatcccca
ctggcttTTCTGAGCTTAAAGACAAAAAACTTCTTCCCCATATTGGGATT
TCTAGAAAAATTGCCATCCCACTGaaagaaaaagttccaccggtgctgtg
agacaggggtgtgttttaGGCAAGTGTTTCTAAAAAGCTGTATTATAAAG
CCAAAACAAAGATactgtattacttcgaataaaagcCCCGGAcgtttttt
agatatttttgatttttggagggGCATTTATtcgaag Run BLAST on NCBI transcript from alignment at sc0001410:16070..17456 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036082 ID=TCONS_00036082|Name=TCONS_00036082|organism=Clytia hemisphaerica|type=transcript|length=1387bp|location=Sequence derived from alignment at sc0001410:16070..17456 (Clytia hemisphaerica)
cttcgaATAAATGCccctccaaaaatcaaaaatatctaaaaaacgTCCGG
GgcttttattcgaagtaatacagtATCTTTGTTTTGGCTTTATAATACAG
CTTTTTAGAAACACTTGCCtaaaacacacccctgtctcacagcaccggtg
gaactttttctttCAGTGGGATGGCAATTTTTCTAGAAATCCCAATATGG
GGAAGAAGTTTTTTGTCTTTAAGCTCAGAAaagccagtggggatggtttt
ggagtgtaattttttcaatgcCGGGATAAAATCAGGGTGCAATTCCTCAG
TGGGGTTAAAATTTAGAGTATATATATTACAGTAGGGCGATTTTTTGACC
AATTCTTCCAGTGGAGGGGGGGAGTGTTCcatcgggtctgtgacacaggg
gtgtcctATCCATCAAGTATTTGTTTAACTATCCTTGAGTCAATTTGTAA
TCGAAGAGAATATTCCTAAGTACgtgatttttatcaaaatactctctcta
attcgaaacttTGCAAATCCAAAATCTTACTGTatttcgaactaaaatat
tgggtCCTTTAGCATAAAATACTCCCtgaaattcgaatctttctgtaatt
cgatgaAGATTTTCTGTAAAGACCAACTCTCttagttgactctctctaat
tcgatcttcacgAGACCAAAAGTtctcttcgaattagagaaatattcTAA
TTACAGAGACTATTTTATATTACTTAACAGCTTAGGGTGACCGAAAATtt
agtttgaattatagaaagattcgaatagtaaaAGTTCGAGTTAGAAGGAG
TTCACTGAAGAACGAGTTAAAACCTGTAAAATTAGATAACAAATTTGACA
TACATAGATCCATTGGACGTATACTATACGTATAGTCAACTTTATCTTAC
AAGAATGTAAAGAAATCCAAGAAGTTATTTCAACTCAATTACCTTGTTAC
CAAAGAGGTTCAACCCGTTGATCGCTTCTAATGCTGCCTTCACCATACCA
ACAGAACTAAAACAATGTTTgttccaaattttttcatctatggctcaaat
tttaggcaatttctcaaagtttttgaaaatgttaatttcattaaaaaccg
ctgggttattttttcatgaatccctttagaagttttgcgcctcatttttt
tgcttgagagtcaagtaaacgctATAGCGCTTtcacagcattaatctttg
atacgcattttggcgggacgctagtgtgactaactgccagtAATAATACG
TTCCATGATGACGTCTGATTCACGTGGTGAGGTCGAAGGAAAGGAATGat
gacaaaacaaaaacattcaaagcATTCTCGCCTCGTGTGCATCCATTGTG
AAGTTTTCGGCGTCCgtaaaaattttgtttatctGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036082-exon-sc0001410-1491911889:16070..17456 | TCONS_00036082-exon-sc0001410-1491911889:16070..17456 | Clytia hemisphaerica | exon |
| TCONS_00036082-exon-sc0001410-1510915933:16070..17456 | TCONS_00036082-exon-sc0001410-1510915933:16070..17456 | Clytia hemisphaerica | exon |
| TCONS_00036082-exon-sc0001410-1575043694:16070..17456 | TCONS_00036082-exon-sc0001410-1575043694:16070..17456 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001410 | supercontig | sc0001410:16070..17456 . |
Blast
The following BLAST results are available for this feature:
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