TCONS_00036036 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036036
Unique NameTCONS_00036036
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1365

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036036 ID=TCONS_00036036|Name=TCONS_00036036|organism=Clytia hemisphaerica|type=transcript|length=1365bp
CACTATACTCTTCTCTTGAGAAGTTCTGTGAAAGATTCTTCATGCTTCTA
ACAACACTAAGAGTTGAAAGGGACCACAAGGCTGCACAAGAGTTTTCAAG
GGTGCCAGTTGAAACAGCCATCAGCCCAGAGGAAAGCAGTTACAGAAAGT
ATCTGACAAGTTATGGTTTTTCTCATGTGAAGAATCAATTAGAGATTGCC
AATAAGACCACTTACAATTTCGCCAATGGAGATCAACCTGACTTCTACAC
AACTGAGTCATCACAAGGTGGAAAATACACATTGAGCATTGCTACGTGTA
GTTGTAATTTCAACAAAGCAATGTCTCTTCCCTGTCGACACATTTTCAGT
TTAAGAACTTTCTTGTCATTGGATATGTATGATGAGACCATATGCAGTAA
AAGATGGACAAAAGCCCACTACAGGTCAAACTGTAGATTGCTCAGACACT
CAAATTGTGAAAGAAGTCCTGAAACACCTAATGTGGAAAAATCTGTCATT
TCCACGGCTTccacaaccaaaaacaaacgtTTTAGAACTGCACAGACTGT
TACAAATAGATTGGCTGATATCATATCATTTTCAACTGGGGAAGTGTATC
ACCAAAGACTAGCCcaactgaaagatttgataaACTCGTGGGCTGCTGGA
ACAGAAGTTGTCATTGAGGAATCAACAAACAACGAGGTTGATTTCCATCA
AAGCTGTCCTCCTGAAACTATTCCAGATACAAGCCAAGAAGTCCAGCAAG
ACACACAAAAGACACAGGTGCTGACGGAAAAAGCCAACGAAGTGAATGGA
ATCAAACAAATAATCATGCCTTCAGGTTTGAAGCAAAAGGGACGTCCCAA
AGGAGTGGTCACAACTGTTATTGGATTACCAAAAGCCAAAACAAAGAACT
CGAGCTTTGTCAAGCTACCTATTGAAAACAAGAAGGAGACAATCCTTTCG
TGGATTACGTATCCAACAACTGCcaaaaatgcactgaaaggtcTCTATTT
GGTGGAGAGAGTTGATTTGCGAGAACCTTGTGAGATCAATGTTGCAATAA
TTAGGCCTGAAGTTGACATCAACTTGATCAGACCATACTTGGAAGAAAAT
GCTTGGACAAAGCTTCAAAAGGTTGTGGAAGAGATAAAGAAAGATTATCA
AATGAGTTGTAAAGTTTGTGATCATACAATTCCAGATGATTGCTTAGAGG
AAATTATCACCTGCACTTTGTGTCTTCATAACATTCACCTAGCATGTACA
GGACTAAAGAAAAGCCCCAAATCGAAATCTTGGCGTTGTCAAGTTTGCaa
gaaaagtGATGGACagtcgaaaaagaaaaagatgtcTAAAGaaaatcgAC
CTCCAATCAAAACCA
Run BLAST on NCBI

protein sequence of TCONS_00036036-protein

>TCONS_00036036-protein ID=TCONS_00036036-protein|Name=TCONS_00036036-protein|organism=Clytia hemisphaerica|type=polypeptide|length=454bp
LYSSLEKFCERFFMLLTTLRVERDHKAAQEFSRVPVETAISPEESSYRKY
LTSYGFSHVKNQLEIANKTTYNFANGDQPDFYTTESSQGGKYTLSIATCS
CNFNKAMSLPCRHIFSLRTFLSLDMYDETICSKRWTKAHYRSNCRLLRHS
NCERSPETPNVEKSVISTASTTKNKRFRTAQTVTNRLADIISFSTGEVYH
QRLAQLKDLINSWAAGTEVVIEESTNNEVDFHQSCPPETIPDTSQEVQQD
TQKTQVLTEKANEVNGIKQIIMPSGLKQKGRPKGVVTTVIGLPKAKTKNS
SFVKLPIENKKETILSWITYPTTAKNALKGLYLVERVDLREPCEINVAII
RPEVDINLIRPYLEENAWTKLQKVVEEIKKDYQMSCKVCDHTIPDDCLEE
IITCTLCLHNIHLACTGLKKSPKSKSWRCQVCKKSDGQSKKKKMSKENRP
PIKT
Run BLAST on NCBI

transcript from alignment at sc0001406:51394..54109+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036036 ID=TCONS_00036036|Name=TCONS_00036036|organism=Clytia hemisphaerica|type=transcript|length=2716bp|location=Sequence derived from alignment at sc0001406:51394..54109+ (Clytia hemisphaerica)
CACTATACTCTTCTCTTGAGAAGTTCTGTGAAAGATTCTTCATGCTTCTA
ACAACACTAAGAGTTGAAAGGGACCACAAGGCTGCACAAGAGTTTTCAAG
GGTGCCAGTTGAAACAGCCATCAGCCCAGAGGAAAGCAGTTACAGAAAGT
ATCTGACAAGTTATGGTTTTTCTCATGTGAAGAATCAATTAGAGATTGCC
AATAAGACCACTTACAATTTCGCCAATGGAGATCAACCTGACTTCTACAC
AACTGAGTCATCACAAGGTGGAAAATACACATTGAGCATTGCTACGTGTA
GTTGTAATTTCAACAAAGCAATGTCTCTTCCCTGTCGACACATTTTCAGT
TTAAGAACTTTCTTGTCATTGGATATGTATGATGAGACCATATGCAGTAA
AAGATGGACAAAAGCCCACTACAGGTCAAACTGTAGATTGCTCAGACACT
CAAATTGTGAAAGAAGTCCTGAAACACCTAATGTGGAAAAATCTGTCATT
TCCACGGCTTccacaaccaaaaacaaacgtTTTAGAACTGCACAGACTGT
TACAAATAGATTGGCTGATATCATATCATTTTCAACTGGGGAAGTGTATC
ACCAAAGACTAGCCcaactgaaagatttgataaACTCGTGGGCTGCTGGA
ACAGAAGTTGTCATTGAGGAATCAACAAACAACGAGGGTAAGAGTGTGTA
CCACTGCTATTTGTGGCTGGACtggatttttttagatttttttttgaaat
ttttgttgtttgattCTTCAGACCAAACAATTTTCTTTGCTAAGGATATA
GTGCTGTATAGTGATAATTTTGATTTGCATTTTTAAGTGTCAATCTAATT
CAGGTTTTTTACTAAAATTCCTTACACAATTTTTAGCTTAAATCAGTGTT
GCAGGTTATCTGATCTGTTTCACTAAATAAGGGTTTCAAACACCTTGCTG
TCCAAATAATTTTAGACATTACAGAGTGGATTTAACATTTCGTTATTCTG
TTTTATTTAGTTGATTTCCATCAAAGCTGTCCTCCTGAAACTATTCCAGG
TAAAAAAGAAGCTTTCCATATATTCATTTCATGTATTTTACATAGAAAAA
GTCCATACAACATGTTGATTTATGATATCAAGTTCAAGGGGATTTTACTA
AACAACTAGCTAAATAGATTTTTCTTATCTGCTTATCGATACTTTATTAG
ATACAAGCCAAGAAGTCCAGCAAGACACACAAAAGACACAGGTGCTGACG
GAAAAAGCCAACGAAGGTtaaatttatttctgattttttgttttatatct
GGACGGCAAACATATCCCTAATTCTTAATAAATAATAGATTTGTCATCTT
AGCTGAGGGGATTAAGCACCTTCTAGACCTCTAAATTACATTCTTAAACC
TACAGTCCGAAACTTGATCTTTGGAGTGGTTGACAGTGACAGTtttgaaa
tgttgaaaattttccagtaTTTTTATTGTCCTctttaaacatttatttta
gTGAATGGAATCAAACAAATAATCATGCCTTCAGGTTTGAAGCAAAAGGG
ACGTCCCAAAGGAGTGGTCACAACTGTTATTGGATTACCAAAAGCCAAAA
CAAAGAACTCGAGCTTTGTCAAGCTACCTATTGAAAACAAGAAGGAGACA
ATCCTTTCGTGGATTACGTATCCAACAACTGCcaaaaatgcactgaaagg
tcTCTATTTGGTGGAGAGAGTTGATTTGCGAGAACCTTGTGAGATCAATG
TTGCAATAATTAGGCCTGAAGTTGACATCAACTTGATCAGACCATACTTG
GAAGAAAATGCTTGGACAAAGCTTCAAAAGGTTGTGGAAGAGATAAAGAA
AGATTATCAAATGAGTTGTAAAGTTTGTGATCATACAATTCCAGATGATT
GCTTAGAGGAAATTATCACCTGCACTTTGTGTCTTCATAACATTCACCTA
GCATGTACAGGACTAAAGAAAAGCCCCAAATCGAAATCTTGGCGTTGTCA
AGTTTGCaagaaaagtaagaaaattaaattatagataatattttaaaatg
attCCGACAAAAATTAGTGAAAAGAACCCCCAGAAGAATCAACATTTCAC
CAAGTTTTTGGGCTGTTCTCAACTGTCAACTCTTTTGAACTATTTTAGAc
ctttttcctttaaaatcttcttctttttttaaggtGATGGACagtcgaaa
aagaaaaagatgtcTAAAGGTAAATAATGCCAAAATGTTGAGATTGATTT
CTGGggaacaaaagaaagaagaaagataagaGATTGGGCTgctccattaa
aaaaccatacaggggtcggactaaccttttcaagtcaaaaaaaattattg
aaaatgtgtggataccctctggaaaatgggaaaatttgcAAATTCACCCT
TGGAAAAATCCTTTTGAtgataccttaaagtgagggtggacgaactaaaa
caagtgttttaccccctggaaattttaaaataacttttgagccccttgga
aaaatgaaaaacaccccctggaaaatttccTCAGAATACCCTCTAGAAAA
TTTGTCCAACCCCTTGTatagatataaaatggaatggcccattgttTCTT
TCGAATGTGCGATGAGAAATACTTGCTTGAAAGACTACTAACTttcatat
ttattttgaaacgaTTTCTACGTATTTCTattataattttagaaaatcgA
CCTCCAATCAAAACCA

Coding sequence (CDS) from alignment at sc0001406:51394..54109+

>TCONS_00036036 ID=TCONS_00036036|Name=TCONS_00036036|organism=Clytia hemisphaerica|type=CDS|length=8172bp|location=Sequence derived from alignment at sc0001406:51394..54109+ (Clytia hemisphaerica)
CTATACTCTTCTCTTGAGAAGTTCTGTGAAAGATTCTTCATGCTTCTAAC
AACACTAAGAGTTGAAAGGGACCACAAGGCTGCACAAGAGTTTTCAAGGG
TGCCAGTTGAAACAGCCATCAGCCCAGAGGAAAGCAGTTACAGAAAGTAT
CTGACAAGTTATGGTTTTTCTCATGTGAAGAATCAATTAGAGATTGCCAA
TAAGACCACTTACAATTTCGCCAATGGAGATCAACCTGACTTCTACACAA
CTGAGTCATCACAAGGTGGAAAATACACATTGAGCATTGCTACGTGTAGT
TGTAATTTCAACAAAGCAATGTCTCTTCCCTGTCGACACATTTTCAGTTT
AAGAACTTTCTTGTCATTGGATATGTATGATGAGACCATATGCAGTAAAA
GATGGACAAAAGCCCACTACAGGTCAAACTGTAGATTGCTCAGACACTCA
AATTGTGAAAGAAGTCCTGAAACACCTAATGTGGAAAAATCTGTCATTTC
CACGGCTTccacaaccaaaaacaaacgtTTTAGAACTGCACAGACTGTTA
CAAATAGATTGGCTGATATCATATCATTTTCAACTGGGGAAGTGTATCAC
CAAAGACTAGCCcaactgaaagatttgataaACTCGTGGGCTGCTGGAAC
AGAAGTTGTCATTGAGGAATCAACAAACAACGAGGTTGATTTCCATCAAA
GCTGTCCTCCTGAAACTATTCCAGATACAAGCCAAGAAGTCCAGCAAGAC
ACACAAAAGACACAGGTGCTGACGGAAAAAGCCAACGAAGTGAATGGAAT
CAAACAAATAATCATGCCTTCAGGTTTGAAGCAAAAGGGACGTCCCAAAG
GAGTGGTCACAACTGTTATTGGATTACCAAAAGCCAAAACAAAGAACTCG
AGCTTTGTCAAGCTACCTATTGAAAACAAGAAGGAGACAATCCTTTCGTG
GATTACGTATCCAACAACTGCcaaaaatgcactgaaaggtcTCTATTTGG
TGGAGAGAGTTGATTTGCGAGAACCTTGTGAGATCAATGTTGCAATAATT
AGGCCTGAAGTTGACATCAACTTGATCAGACCATACTTGGAAGAAAATGC
TTGGACAAAGCTTCAAAAGGTTGTGGAAGAGATAAAGAAAGATTATCAAA
TGAGTTGTAAAGTTTGTGATCATACAATTCCAGATGATTGCTTAGAGGAA
ATTATCACCTGCACTTTGTGTCTTCATAACATTCACCTAGCATGTACAGG
ACTAAAGAAAAGCCCCAAATCGAAATCTTGGCGTTGTCAAGTTTGCaaga
aaagtGATGGACagtcgaaaaagaaaaagatgtcTAAAGaaaatcgACCT
CCAATCAAAACCCTATACTCTTCTCTTGAGAAGTTCTGTGAAAGATTCTT
CATGCTTCTAACAACACTAAGAGTTGAAAGGGACCACAAGGCTGCACAAG
AGTTTTCAAGGGTGCCAGTTGAAACAGCCATCAGCCCAGAGGAAAGCAGT
TACAGAAAGTATCTGACAAGTTATGGTTTTTCTCATGTGAAGAATCAATT
AGAGATTGCCAATAAGACCACTTACAATTTCGCCAATGGAGATCAACCTG
ACTTCTACACAACTGAGTCATCACAAGGTGGAAAATACACATTGAGCATT
GCTACGTGTAGTTGTAATTTCAACAAAGCAATGTCTCTTCCCTGTCGACA
CATTTTCAGTTTAAGAACTTTCTTGTCATTGGATATGTATGATGAGACCA
TATGCAGTAAAAGATGGACAAAAGCCCACTACAGGTCAAACTGTAGATTG
CTCAGACACTCAAATTGTGAAAGAAGTCCTGAAACACCTAATGTGGAAAA
ATCTGTCATTTCCACGGCTTccacaaccaaaaacaaacgtTTTAGAACTG
CACAGACTGTTACAAATAGATTGGCTGATATCATATCATTTTCAACTGGG
GAAGTGTATCACCAAAGACTAGCCcaactgaaagatttgataaACTCGTG
GGCTGCTGGAACAGAAGTTGTCATTGAGGAATCAACAAACAACGAGGTTG
ATTTCCATCAAAGCTGTCCTCCTGAAACTATTCCAGATACAAGCCAAGAA
GTCCAGCAAGACACACAAAAGACACAGGTGCTGACGGAAAAAGCCAACGA
AGTGAATGGAATCAAACAAATAATCATGCCTTCAGGTTTGAAGCAAAAGG
GACGTCCCAAAGGAGTGGTCACAACTGTTATTGGATTACCAAAAGCCAAA
ACAAAGAACTCGAGCTTTGTCAAGCTACCTATTGAAAACAAGAAGGAGAC
AATCCTTTCGTGGATTACGTATCCAACAACTGCcaaaaatgcactgaaag
gtcTCTATTTGGTGGAGAGAGTTGATTTGCGAGAACCTTGTGAGATCAAT
GTTGCAATAATTAGGCCTGAAGTTGACATCAACTTGATCAGACCATACTT
GGAAGAAAATGCTTGGACAAAGCTTCAAAAGGTTGTGGAAGAGATAAAGA
AAGATTATCAAATGAGTTGTAAAGTTTGTGATCATACAATTCCAGATGAT
TGCTTAGAGGAAATTATCACCTGCACTTTGTGTCTTCATAACATTCACCT
AGCATGTACAGGACTAAAGAAAAGCCCCAAATCGAAATCTTGGCGTTGTC
AAGTTTGCaagaaaagtGATGGACagtcgaaaaagaaaaagatgtcTAAA
GaaaatcgACCTCCAATCAAAACCCTATACTCTTCTCTTGAGAAGTTCTG
TGAAAGATTCTTCATGCTTCTAACAACACTAAGAGTTGAAAGGGACCACA
AGGCTGCACAAGAGTTTTCAAGGGTGCCAGTTGAAACAGCCATCAGCCCA
GAGGAAAGCAGTTACAGAAAGTATCTGACAAGTTATGGTTTTTCTCATGT
GAAGAATCAATTAGAGATTGCCAATAAGACCACTTACAATTTCGCCAATG
GAGATCAACCTGACTTCTACACAACTGAGTCATCACAAGGTGGAAAATAC
ACATTGAGCATTGCTACGTGTAGTTGTAATTTCAACAAAGCAATGTCTCT
TCCCTGTCGACACATTTTCAGTTTAAGAACTTTCTTGTCATTGGATATGT
ATGATGAGACCATATGCAGTAAAAGATGGACAAAAGCCCACTACAGGTCA
AACTGTAGATTGCTCAGACACTCAAATTGTGAAAGAAGTCCTGAAACACC
TAATGTGGAAAAATCTGTCATTTCCACGGCTTccacaaccaaaaacaaac
gtTTTAGAACTGCACAGACTGTTACAAATAGATTGGCTGATATCATATCA
TTTTCAACTGGGGAAGTGTATCACCAAAGACTAGCCcaactgaaagattt
gataaACTCGTGGGCTGCTGGAACAGAAGTTGTCATTGAGGAATCAACAA
ACAACGAGGTTGATTTCCATCAAAGCTGTCCTCCTGAAACTATTCCAGAT
ACAAGCCAAGAAGTCCAGCAAGACACACAAAAGACACAGGTGCTGACGGA
AAAAGCCAACGAAGTGAATGGAATCAAACAAATAATCATGCCTTCAGGTT
TGAAGCAAAAGGGACGTCCCAAAGGAGTGGTCACAACTGTTATTGGATTA
CCAAAAGCCAAAACAAAGAACTCGAGCTTTGTCAAGCTACCTATTGAAAA
CAAGAAGGAGACAATCCTTTCGTGGATTACGTATCCAACAACTGCcaaaa
atgcactgaaaggtcTCTATTTGGTGGAGAGAGTTGATTTGCGAGAACCT
TGTGAGATCAATGTTGCAATAATTAGGCCTGAAGTTGACATCAACTTGAT
CAGACCATACTTGGAAGAAAATGCTTGGACAAAGCTTCAAAAGGTTGTGG
AAGAGATAAAGAAAGATTATCAAATGAGTTGTAAAGTTTGTGATCATACA
ATTCCAGATGATTGCTTAGAGGAAATTATCACCTGCACTTTGTGTCTTCA
TAACATTCACCTAGCATGTACAGGACTAAAGAAAAGCCCCAAATCGAAAT
CTTGGCGTTGTCAAGTTTGCaagaaaagtGATGGACagtcgaaaaagaaa
aagatgtcTAAAGaaaatcgACCTCCAATCAAAACCCTATACTCTTCTCT
TGAGAAGTTCTGTGAAAGATTCTTCATGCTTCTAACAACACTAAGAGTTG
AAAGGGACCACAAGGCTGCACAAGAGTTTTCAAGGGTGCCAGTTGAAACA
GCCATCAGCCCAGAGGAAAGCAGTTACAGAAAGTATCTGACAAGTTATGG
TTTTTCTCATGTGAAGAATCAATTAGAGATTGCCAATAAGACCACTTACA
ATTTCGCCAATGGAGATCAACCTGACTTCTACACAACTGAGTCATCACAA
GGTGGAAAATACACATTGAGCATTGCTACGTGTAGTTGTAATTTCAACAA
AGCAATGTCTCTTCCCTGTCGACACATTTTCAGTTTAAGAACTTTCTTGT
CATTGGATATGTATGATGAGACCATATGCAGTAAAAGATGGACAAAAGCC
CACTACAGGTCAAACTGTAGATTGCTCAGACACTCAAATTGTGAAAGAAG
TCCTGAAACACCTAATGTGGAAAAATCTGTCATTTCCACGGCTTccacaa
ccaaaaacaaacgtTTTAGAACTGCACAGACTGTTACAAATAGATTGGCT
GATATCATATCATTTTCAACTGGGGAAGTGTATCACCAAAGACTAGCCca
actgaaagatttgataaACTCGTGGGCTGCTGGAACAGAAGTTGTCATTG
AGGAATCAACAAACAACGAGGTTGATTTCCATCAAAGCTGTCCTCCTGAA
ACTATTCCAGATACAAGCCAAGAAGTCCAGCAAGACACACAAAAGACACA
GGTGCTGACGGAAAAAGCCAACGAAGTGAATGGAATCAAACAAATAATCA
TGCCTTCAGGTTTGAAGCAAAAGGGACGTCCCAAAGGAGTGGTCACAACT
GTTATTGGATTACCAAAAGCCAAAACAAAGAACTCGAGCTTTGTCAAGCT
ACCTATTGAAAACAAGAAGGAGACAATCCTTTCGTGGATTACGTATCCAA
CAACTGCcaaaaatgcactgaaaggtcTCTATTTGGTGGAGAGAGTTGAT
TTGCGAGAACCTTGTGAGATCAATGTTGCAATAATTAGGCCTGAAGTTGA
CATCAACTTGATCAGACCATACTTGGAAGAAAATGCTTGGACAAAGCTTC
AAAAGGTTGTGGAAGAGATAAAGAAAGATTATCAAATGAGTTGTAAAGTT
TGTGATCATACAATTCCAGATGATTGCTTAGAGGAAATTATCACCTGCAC
TTTGTGTCTTCATAACATTCACCTAGCATGTACAGGACTAAAGAAAAGCC
CCAAATCGAAATCTTGGCGTTGTCAAGTTTGCaagaaaagtGATGGACag
tcgaaaaagaaaaagatgtcTAAAGaaaatcgACCTCCAATCAAAACCCT
ATACTCTTCTCTTGAGAAGTTCTGTGAAAGATTCTTCATGCTTCTAACAA
CACTAAGAGTTGAAAGGGACCACAAGGCTGCACAAGAGTTTTCAAGGGTG
CCAGTTGAAACAGCCATCAGCCCAGAGGAAAGCAGTTACAGAAAGTATCT
GACAAGTTATGGTTTTTCTCATGTGAAGAATCAATTAGAGATTGCCAATA
AGACCACTTACAATTTCGCCAATGGAGATCAACCTGACTTCTACACAACT
GAGTCATCACAAGGTGGAAAATACACATTGAGCATTGCTACGTGTAGTTG
TAATTTCAACAAAGCAATGTCTCTTCCCTGTCGACACATTTTCAGTTTAA
GAACTTTCTTGTCATTGGATATGTATGATGAGACCATATGCAGTAAAAGA
TGGACAAAAGCCCACTACAGGTCAAACTGTAGATTGCTCAGACACTCAAA
TTGTGAAAGAAGTCCTGAAACACCTAATGTGGAAAAATCTGTCATTTCCA
CGGCTTccacaaccaaaaacaaacgtTTTAGAACTGCACAGACTGTTACA
AATAGATTGGCTGATATCATATCATTTTCAACTGGGGAAGTGTATCACCA
AAGACTAGCCcaactgaaagatttgataaACTCGTGGGCTGCTGGAACAG
AAGTTGTCATTGAGGAATCAACAAACAACGAGGTTGATTTCCATCAAAGC
TGTCCTCCTGAAACTATTCCAGATACAAGCCAAGAAGTCCAGCAAGACAC
ACAAAAGACACAGGTGCTGACGGAAAAAGCCAACGAAGTGAATGGAATCA
AACAAATAATCATGCCTTCAGGTTTGAAGCAAAAGGGACGTCCCAAAGGA
GTGGTCACAACTGTTATTGGATTACCAAAAGCCAAAACAAAGAACTCGAG
CTTTGTCAAGCTACCTATTGAAAACAAGAAGGAGACAATCCTTTCGTGGA
TTACGTATCCAACAACTGCcaaaaatgcactgaaaggtcTCTATTTGGTG
GAGAGAGTTGATTTGCGAGAACCTTGTGAGATCAATGTTGCAATAATTAG
GCCTGAAGTTGACATCAACTTGATCAGACCATACTTGGAAGAAAATGCTT
GGACAAAGCTTCAAAAGGTTGTGGAAGAGATAAAGAAAGATTATCAAATG
AGTTGTAAAGTTTGTGATCATACAATTCCAGATGATTGCTTAGAGGAAAT
TATCACCTGCACTTTGTGTCTTCATAACATTCACCTAGCATGTACAGGAC
TAAAGAAAAGCCCCAAATCGAAATCTTGGCGTTGTCAAGTTTGCaagaaa
agtGATGGACagtcgaaaaagaaaaagatgtcTAAAGaaaatcgACCTCC
AATCAAAACCCTATACTCTTCTCTTGAGAAGTTCTGTGAAAGATTCTTCA
TGCTTCTAACAACACTAAGAGTTGAAAGGGACCACAAGGCTGCACAAGAG
TTTTCAAGGGTGCCAGTTGAAACAGCCATCAGCCCAGAGGAAAGCAGTTA
CAGAAAGTATCTGACAAGTTATGGTTTTTCTCATGTGAAGAATCAATTAG
AGATTGCCAATAAGACCACTTACAATTTCGCCAATGGAGATCAACCTGAC
TTCTACACAACTGAGTCATCACAAGGTGGAAAATACACATTGAGCATTGC
TACGTGTAGTTGTAATTTCAACAAAGCAATGTCTCTTCCCTGTCGACACA
TTTTCAGTTTAAGAACTTTCTTGTCATTGGATATGTATGATGAGACCATA
TGCAGTAAAAGATGGACAAAAGCCCACTACAGGTCAAACTGTAGATTGCT
CAGACACTCAAATTGTGAAAGAAGTCCTGAAACACCTAATGTGGAAAAAT
CTGTCATTTCCACGGCTTccacaaccaaaaacaaacgtTTTAGAACTGCA
CAGACTGTTACAAATAGATTGGCTGATATCATATCATTTTCAACTGGGGA
AGTGTATCACCAAAGACTAGCCcaactgaaagatttgataaACTCGTGGG
CTGCTGGAACAGAAGTTGTCATTGAGGAATCAACAAACAACGAGGTTGAT
TTCCATCAAAGCTGTCCTCCTGAAACTATTCCAGATACAAGCCAAGAAGT
CCAGCAAGACACACAAAAGACACAGGTGCTGACGGAAAAAGCCAACGAAG
TGAATGGAATCAAACAAATAATCATGCCTTCAGGTTTGAAGCAAAAGGGA
CGTCCCAAAGGAGTGGTCACAACTGTTATTGGATTACCAAAAGCCAAAAC
AAAGAACTCGAGCTTTGTCAAGCTACCTATTGAAAACAAGAAGGAGACAA
TCCTTTCGTGGATTACGTATCCAACAACTGCcaaaaatgcactgaaaggt
cTCTATTTGGTGGAGAGAGTTGATTTGCGAGAACCTTGTGAGATCAATGT
TGCAATAATTAGGCCTGAAGTTGACATCAACTTGATCAGACCATACTTGG
AAGAAAATGCTTGGACAAAGCTTCAAAAGGTTGTGGAAGAGATAAAGAAA
GATTATCAAATGAGTTGTAAAGTTTGTGATCATACAATTCCAGATGATTG
CTTAGAGGAAATTATCACCTGCACTTTGTGTCTTCATAACATTCACCTAG
CATGTACAGGACTAAAGAAAAGCCCCAAATCGAAATCTTGGCGTTGTCAA
GTTTGCaagaaaagtGATGGACagtcgaaaaagaaaaagatgtcTAAAGa
aaatcgACCTCCAATCAAAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021180XLOC_021180Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036036-proteinTCONS_00036036-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036036-exon-sc0001406-1491911889:51394..52080TCONS_00036036-exon-sc0001406-1491911889:51394..52080Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1510915933:51394..52080TCONS_00036036-exon-sc0001406-1510915933:51394..52080Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1575043694:51394..52080TCONS_00036036-exon-sc0001406-1575043694:51394..52080Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1491911889:52404..52442TCONS_00036036-exon-sc0001406-1491911889:52404..52442Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1510915933:52404..52442TCONS_00036036-exon-sc0001406-1510915933:52404..52442Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1575043694:52404..52442TCONS_00036036-exon-sc0001406-1575043694:52404..52442Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1491911889:52594..52659TCONS_00036036-exon-sc0001406-1491911889:52594..52659Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1510915933:52594..52659TCONS_00036036-exon-sc0001406-1510915933:52594..52659Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1575043694:52594..52659TCONS_00036036-exon-sc0001406-1575043694:52594..52659Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1491911889:52895..53407TCONS_00036036-exon-sc0001406-1491911889:52895..53407Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1510915933:52895..53407TCONS_00036036-exon-sc0001406-1510915933:52895..53407Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1575043694:52895..53407TCONS_00036036-exon-sc0001406-1575043694:52895..53407Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1491911889:53577..53612TCONS_00036036-exon-sc0001406-1491911889:53577..53612Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1510915933:53577..53612TCONS_00036036-exon-sc0001406-1510915933:53577..53612Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1575043694:53577..53612TCONS_00036036-exon-sc0001406-1575043694:53577..53612Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1491911889:54086..54109TCONS_00036036-exon-sc0001406-1491911889:54086..54109Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1510915933:54086..54109TCONS_00036036-exon-sc0001406-1510915933:54086..54109Clytia hemisphaericaexon
TCONS_00036036-exon-sc0001406-1575043694:54086..54109TCONS_00036036-exon-sc0001406-1575043694:54086..54109Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001406supercontigsc0001406:51394..54109 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0347489	0	0	0	0	0	0	0	0	0	0.0816441	0	0.0174268	0.056105	0	0	0	0	0	0	0.0351887	0	0	0	0.0420822	0.0449113	0	0.0347054
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR007527Znf_SWIM
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036036 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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