TCONS_00036036-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036036-protein
Unique NameTCONS_00036036-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length454

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036036-protein ID=TCONS_00036036-protein|Name=TCONS_00036036-protein|organism=Clytia hemisphaerica|type=polypeptide|length=454bp
LYSSLEKFCERFFMLLTTLRVERDHKAAQEFSRVPVETAISPEESSYRKY
LTSYGFSHVKNQLEIANKTTYNFANGDQPDFYTTESSQGGKYTLSIATCS
CNFNKAMSLPCRHIFSLRTFLSLDMYDETICSKRWTKAHYRSNCRLLRHS
NCERSPETPNVEKSVISTASTTKNKRFRTAQTVTNRLADIISFSTGEVYH
QRLAQLKDLINSWAAGTEVVIEESTNNEVDFHQSCPPETIPDTSQEVQQD
TQKTQVLTEKANEVNGIKQIIMPSGLKQKGRPKGVVTTVIGLPKAKTKNS
SFVKLPIENKKETILSWITYPTTAKNALKGLYLVERVDLREPCEINVAII
RPEVDINLIRPYLEENAWTKLQKVVEEIKKDYQMSCKVCDHTIPDDCLEE
IITCTLCLHNIHLACTGLKKSPKSKSWRCQVCKKSDGQSKKKKMSKENRP
PIKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021180XLOC_021180Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036036TCONS_00036036Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR007527Znf_SWIM
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 81..270
e-value: 0.0011
score: 18.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 363..450
e-value: 5.3E-8
score: 32.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 433..454
NoneNo IPR availableCDDcd15489PHD_SFcoord: 385..432
e-value: 2.21187E-4
score: 38.067
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 82..122
score: 9.371
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 383..435
score: 9.036
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 380..443

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036036-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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