TCONS_00035974 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035974
Unique NameTCONS_00035974
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length367

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035974 ID=TCONS_00035974|Name=TCONS_00035974|organism=Clytia hemisphaerica|type=transcript|length=367bp
GACGTACGTATCCAAACTTGATCTCAATCTTCGAAATGTCTGGTGATTTG
TTCCTGTTGGAAAAAAACGATTTGGTATGTAAACTTTGTGTGGTTTGATT
ATGTGACATTTATGTAAGCGAAACactgaaaactaatttttgttattttg
gaaGCCGGAAATCCACCGGATGTGAAAAAAAGCCAATTTTGCACAATTCT
TGTAATTTTGTAAATTGCTATGAACTATGAACTATCGAAATTTTGGAATT
ACGAATACttagaaatataatttttagattcattAAATCGAAACTCAAGT
TACCCGTTTTTGCCCCTGTACCAACCTGTATTTTCCTGTtcatttaaaaa
cgaaagcagaTTTTCGG
Run BLAST on NCBI

transcript from alignment at sc0001396:8066..8432

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035974 ID=TCONS_00035974|Name=TCONS_00035974|organism=Clytia hemisphaerica|type=transcript|length=367bp|location=Sequence derived from alignment at sc0001396:8066..8432 (Clytia hemisphaerica)
CCGAAAAtctgctttcgtttttaaatgaACAGGAAAATACAGGTTGGTAC
AGGGGCAAAAACGGGTAACTTGAGTTTCGATTTaatgaatctaaaaatta
tatttctaaGTATTCGTAATTCCAAAATTTCGATAGTTCATAGTTCATAG
CAATTTACAAAATTACAAGAATTGTGCAAAATTGGCTTTTTTTCACATCC
GGTGGATTTCCGGCttccaaaataacaaaaattagttttcagtGTTTCGC
TTACATAAATGTCACATAATCAAACCACACAAAGTTTACATACCAAATCG
TTTTTTTCCAACAGGAACAAATCACCAGACATTTCGAAGATTGAGATCAA
GTTTGGATACGTACGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021132XLOC_021132Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035974-exon-sc0001396-1491911889:8066..8432TCONS_00035974-exon-sc0001396-1491911889:8066..8432Clytia hemisphaericaexon
TCONS_00035974-exon-sc0001396-1510915933:8066..8432TCONS_00035974-exon-sc0001396-1510915933:8066..8432Clytia hemisphaericaexon
TCONS_00035974-exon-sc0001396-1575043694:8066..8432TCONS_00035974-exon-sc0001396-1575043694:8066..8432Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001396supercontigsc0001396:8066..8432 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.572791	1.02689	1.41344	0.465238	4.82484	2.44903	1.87305	2.08642	0.991675	0.969856	2.39121	0	1.77998	0.573046	1.1931	5.49008	1.56098	1.50704	0.30566	1.58764	0.530897	0.841985	2.34687	1.79646	0.604076	0	3.0226	0.856009	0.438362	2.76571
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035974 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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